Accumulation of germanium (Ge) in plant tissues of grasses is not solely driven by its incorporation in phytoliths

Author(s):  
Sabine Kaiser ◽  
Christin Moschner ◽  
Oliver Wiche

<p>Until recently it has been generally assumed that Ge taken up by plants is stored in phytoliths together with Si. This assumption is mostly based on the geochemical similarities between Ge and Si, while a scientific proof was lacking. The aim of the present study is to i) compare the uptake of Si and Ge in three grass species, ii) localize Ge and Si stored in above-ground plant parts and iii) evaluate the amounts of Ge and Si sequestrated in phytoliths and plant tissues. Mays (<em>Zea mays</em>), oat (<em>Avana sativa</em>) and reed canary grass (<em>Phalaris arundinacea</em>) were cultivated in the greenhouse on soil and sand to control element supply. Leaf phytoliths were extracted by dry ashing. Total elemental composition of leaves, phytoliths, stems and roots were measured by ICP-MS. For the localization of phytoliths and the determination of Ge and Si within leaf tissues and phytoliths scanning electron microscopy (SEM), energy dispersive x-ray spectroscopy (EDX) and laser ablation ICP-MS (LA-ICP-MS) was used. The amounts of Si and Ge taken up by the species corresponded with biomass formation and decreased in the order <em>Z. mays </em>><em>P. arundinacea, A. sativa</em>. Results from LA-ICP-MS revealed that Si was mostly localizedin phytoliths, while Ge was disorderly distributed within the leaf tissue. In fact, from the total amounts of Ge accumulated in leaves only 10% was present in phytoliths highlighting the role of organic Ge species in plant tissues and the necessity for using bulk Ge/Si instead of Ge/Si in phytoliths to trace biogeochemical cycling of Si. Moreover, our results represent important background data for the optimization of a phytomining of Ge.</p>

2020 ◽  
Author(s):  
Romesh Kumar Salgotra ◽  
Bhagirath Singh Chauhan

Abstract Background: The study of weed genomics is important for the effective management of weeds to enhance crop yield. A rapid, inexpensive and high quality DNA extraction is needed for genomic and other molecular studies. Here, we describe the protocols for DNA extraction from two different parts of the Echinochloa colona plant using modified cetyltrimethylammonium bromide (CTAB) and a commercial kit.Results: In the study, it was observed that the DNA extracted from plant leaf tissues and dry seeds with a modified CTAB protocol was of good quality, with no contaminations of polysaccharides and essential oils. Quality of DNA extracted from dry seeds was comparable with that of plant leaves under both protocols. The extracted DNA from both plant parts was successfully amplified by PCR using the EPSPS microsatellite marker. Compared to the protocol of DNA extracted from leaf tissue, dry seeds will save time and other valuable resources. Moreover, the same protocols can be implemented for the extraction of high-quality DNA for molecular studies in other plant species where a large amount of polysaccharides, secondary metabolites and essential oils are present.Conclusions: Modified methods of DNA extraction from dry seeds are efficient and time-saving which can be used in genotypic and other molecular approaches. High-quality DNA can be isolated from plant leaf tissues using modified CTAB and commercial kits, however, DNA extracted from dry seeds will save time and other valuable resources.


2021 ◽  
Author(s):  
Sefa POLATÖZ ◽  
Murat Seker ◽  
Çağlar KAYA

Abstract In plants, knowing the ploidy level of plant material used in breeding studies, and especially for biotechnology applications, carries great importance. The presence of a rapid variety of dynamics in citrus fruits allows their use as rootstock and varieties ensuring adaptability to various climate and soil conditions with different breeding methods. A variety of appropriate rootstocks are used for commercial citrus species. This study investigated the genome sizes and ploidy levels in citrus rootstocks commonly used around the world with flow cytometry in seedling populations. The study used Gou-Tou, C-35, Troyer Citrange, Taiwanica, Citremon, Yuzu, Sunki mandarin, Flying Dragon, Yuma Citrange, Macrophylla and Chinese orange rootstocks. Fresh leaf tissues were mixed with the triploid Tahiti lime leaf tissue, used as standard species, and cell nuclei were isolated. Cells stained with propidium iodide were read with flow cytometry and histograms and cytograms were obtained. According to the obtained results, all seedlings of species had diploid genome volumes. In terms of genome volume, there were differences found between species. Yuzu seedlings were determined to be the species with largest genome volume (0.808 pg/2C), while Flying Dragon trifoliate had smallest genome volume (0.700 pg/2C).


Author(s):  
Haipeng Mi ◽  
Xilin Zhou ◽  
Bo Liang ◽  
Zhonghua Su ◽  
Qingqing Huang ◽  
...  

1985 ◽  
Vol 63 (6) ◽  
pp. 1135-1140 ◽  
Author(s):  
Barry J. Shelp ◽  
Konrad Sieciechowicz ◽  
Robert J. Ireland ◽  
Kenneth W. Joy

Methods are described for the routine determination of urea and ammonia in plant tissues. Ureido compounds such as allantoin and allantoate interfere with the urea assay but can be conveniently removed by ion-exchange chromatography prior to the color reaction with α-isonitrosopropiophenone. This assay was used to examine the effect of the urease inhibitor acetohydroxamate on leaf urea levels. A survey of methods for ammonia determination showed that for plant extracts and assay mixtures containing amides, microdiffusion followed by nesslerization provided a convenient and reliable technique. This procedure was used to determine asparaginase and glutaminase activities as well as ammonia levels in leaf tissue. In a study of detached soybean leaves, 5 mM acetohydroxamate, supplied via the transpiration stream, inhibited the production of ammonia normally observed in the presence of methionine sulfoximine (a glutamine synthetase inhibitor) and caused an accumulation of urea. The data were interpreted as evidence that leaf ammonia can arise from urea metabolism and supported a role for urea, probably derived from ureide breakdown, in the provision of nitrogen for amino acid and protein synthesis.


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