scholarly journals A global diatom database – abundance, biovolume and biomass in the world ocean

2012 ◽  
Vol 4 (1) ◽  
pp. 149-165 ◽  
Author(s):  
K. Leblanc ◽  
J. Arístegui ◽  
L. Armand ◽  
P. Assmy ◽  
B. Beker ◽  
...  

Abstract. Phytoplankton identification and abundance data are now commonly feeding plankton distribution databases worldwide. This study is a first attempt to compile the largest possible body of data available from different databases as well as from individual published or unpublished datasets regarding diatom distribution in the world ocean. The data obtained originate from time series studies as well as spatial studies. This effort is supported by the Marine Ecosystem Model Inter-Comparison Project (MAREMIP), which aims at building consistent datasets for the main plankton functional types (PFTs) in order to help validate biogeochemical ocean models by using carbon (C) biomass derived from abundance data. In this study we collected over 293 000 individual geo-referenced data points with diatom abundances from bottle and net sampling. Sampling site distribution was not homogeneous, with 58% of data in the Atlantic, 20% in the Arctic, 12% in the Pacific, 8% in the Indian and 1% in the Southern Ocean. A total of 136 different genera and 607 different species were identified after spell checking and name correction. Only a small fraction of these data were also documented for biovolumes and an even smaller fraction was converted to C biomass. As it is virtually impossible to reconstruct everyone's method for biovolume calculation, which is usually not indicated in the datasets, we decided to undertake the effort to document, for every distinct species, the minimum and maximum cell dimensions, and to convert all the available abundance data into biovolumes and C biomass using a single standardized method. Statistical correction of the database was also adopted to exclude potential outliers and suspicious data points. The final database contains 90 648 data points with converted C biomass. Diatom C biomass calculated from cell sizes spans over eight orders of magnitude. The mean diatom biomass for individual locations, dates and depths is 141.19 μg C l−1, while the median value is 11.16 μg C l−1. Regarding biomass distribution, 19% of data are in the range 0–1 μg C l−1, 29% in the range 1–10 μg C l−1, 31% in the range 10–100 μg C l−1, 18% in the range 100–1000 μg C l−1, and only 3% > 1000 μg C l−1. Interestingly, less than 50 species contributed to > 90% of global biomass, among which centric species were dominant. Thus, placing significant efforts on cell size measurements, process studies and C quota calculations of these species should considerably improve biomass estimates in the upcoming years. A first-order estimate of the diatom biomass for the global ocean ranges from 444 to 582 Tg C, which converts to 3 to 4 Tmol Si and to an average Si biomass turnover rate of 0.15 to 0.19 d−1. Link to the dataset: doi:10.1594/PANGAEA.777384.

2012 ◽  
Vol 5 (1) ◽  
pp. 147-185 ◽  
Author(s):  
K. Leblanc ◽  
J. Arístegui ◽  
L. Armand ◽  
P. Assmy ◽  
B. Beker ◽  
...  

Abstract. Phytoplankton identification and abundance data are now commonly feeding plankton distribution databases worldwide. This study is a first attempt to compile the largest possible body of data available from different databases as well as from individual published or unpublished datasets regarding diatom distribution in the world ocean. The data obtained originate from time series studies as well as spatial studies. This effort is supported by the Marine Ecosystem Model Inter-Comparison Project (MAREMIP), which aims at building consistent datasets for the main Plankton Functional Types (PFT) in order to help validate biogeochemical ocean models by using carbon (C) biomass derived from abundance data. In this study we collected over 293 000 individual geo-referenced data points with diatom abundances from bottle and net sampling. Sampling site distribution was not homogeneous, with 58% of data in the Atlantic, 20% in the Arctic, 12% in the Pacific, 8% in the Indian and 1% in the Southern Ocean. A total of 136 different genera and 607 different species were identified after spell checking and name correction. Only a small fraction of these data were also documented for biovolumes and an even smaller fraction was converted to C biomass. As it is virtually impossible to reconstruct everyone's method for biovolume calculation, which is usually not indicated in the datasets, we decided to undertake the effort to document, for every distinct species, the minimum and maximum cell dimensions, and to convert all the available abundance data into biovolumes and C biomass using a single standardized method. Statistical correction of the database was also adopted to exclude potential outliers and suspicious data points. The final database contains 90 648 data points with converted C biomass. Diatom C biomass calculated from cell sizes spans over eight orders of magnitude. The mean diatom biomass for individual locations, dates and depths is 141.19 μg C l−1, while the median value is 11.16 μg C l−1. Regarding biomass distribution, 19% of data are in the range 0–1 μg C l−1, 29% in the range 1–10 μg C l−1, 31% in the range 10–100 μg C l−1, 18% in the range 100–1000 μg C l−1, and only 3% >1000 μg C l−1. Interestingly, less than 50 species contributed to >90% of global biomass, among which centric species were dominant. Thus, placing significant efforts on cell size measurements, process studies and C quota calculations on these species should considerably improve biomass estimates in the upcoming years. A first-order estimate of the diatom biomass for the global ocean ranges from 449 to 558 Tg C, which converts to 5 to 6 Tmol Si and to an average Si biomass turnover rate of 0.11 to 0.20 d−1. Link to the dataset: preliminary link http://doi.pangaea.de/10.1594/PANGAEA.777384.


2012 ◽  
Vol 4 (1) ◽  
pp. 37-46 ◽  
Author(s):  
E. T. Buitenhuis ◽  
W. K. W. Li ◽  
D. Vaulot ◽  
M. W. Lomas ◽  
M. R. Landry ◽  
...  

Abstract. The smallest marine phytoplankton, collectively termed picophytoplankton, have been routinely enumerated by flow cytometry since the late 1980s during cruises throughout most of the world ocean. We compiled a database of 40 946 data points, with separate abundance entries for Prochlorococcus, Synechococcus and picoeukaryotes. We use average conversion factors for each of the three groups to convert the abundance data to carbon biomass. After gridding with 1° spacing, the database covers 2.4% of the ocean surface area, with the best data coverage in the North Atlantic, the South Pacific and North Indian basins, and at least some data in all other basins. The average picophytoplankton biomass is 12 ± 22 μg C l−1 or 1.9 g C m−2. We estimate a total global picophytoplankton biomass of 0.53–1.32 Pg C (17–39% Prochlorococcus, 12–15% Synechococcus and 49–69% picoeukaryotes), with an intermediate/best estimate of 0.74 Pg C. Future efforts in this area of research should focus on reporting calibrated cell size and collecting data in undersampled regions. http://doi.pangaea.de/10.1594/PANGAEA.777385


2012 ◽  
Vol 5 (1) ◽  
pp. 221-242 ◽  
Author(s):  
E. T. Buitenhuis ◽  
W. K. W. Li ◽  
D. Vaulot ◽  
M. W. Lomas ◽  
M. Landry ◽  
...  

Abstract. The smallest marine phytoplankton, collectively termed picophytoplankton, have been routinely enumerated by flow cytometry since the late 1980s, during cruises throughout most of the world ocean. We compiled a database of 40 946 data points, with separate abundance entries for Prochlorococcus, Synechococcus and picoeukaryotes. We use average conversion factors for each of the three groups to convert the abundance data to carbon biomass. After gridding with 1° spacing, the database covers 2.4% of the ocean surface area, with the best data coverage in the North Atlantic, the South Pacific and North Indian basins. The average picophytoplankton biomass is 12 ± 22 μg C l−1 or 1.9 g C m−2. We estimate a total global picophytoplankton biomass of 0.53–0.74 Pg C (17–39% Prochlorococcus, 12–15% Synechococcus and 49–69% picoeukaryotes). Future efforts in this area of research should focus on reporting calibrated cell size, and collecting data in undersampled regions.


2012 ◽  
Vol 5 (2) ◽  
pp. 1077-1106 ◽  
Author(s):  
E. T. Buitenhuis ◽  
M. Vogt ◽  
R. Moriarty ◽  
N. Bednaršek ◽  
S. C. Doney ◽  
...  

Abstract. We present a summary of biomass data for 11 Plankton Functional Types (PFTs) plus phytoplankton pigment data, compiled as part of the MARine Ecosystem biomass DATa (MAREDAT) initiative. The goal of the MAREDAT initiative is to provide global gridded data products with coverage of all biological components of the global ocean ecosystem. This special issue is the first step towards achieving this. The PFTs presented here include picophytoplankton, diazotrophs, coccolithophores, Phaeocystis, diatoms, picoheterotrophs, microzooplankton, foraminifers, mesozooplankton, pteropods and macrozooplankton. All variables have been gridded onto a World Ocean Atlas (WOA) grid (1° × 1° × 33 vertical levels × monthly climatologies). The data show that (1) the global total heterotrophic biomass (2.0–6.4 Pg C) is at least as high as the total autotrophic biomass (0.5–2.6 Pg C excluding nanophytoplankton and autotrophic dinoflagellates), (2) the biomass of zooplankton calcifiers (0.9–2.3 Pg C) is substantially higher than that of coccolithophores (0.01–0.14 Pg C), (3) patchiness of biomass distribution increases with organism size, and (4) although zooplankton biomass measurements below 200 m are rare, the limited measurements available suggest that Bacteria and Archaea are not the only heterotrophs in the deep sea. More data will be needed to characterize ocean ecosystem functioning and associated biogeochemistry in the Southern Hemisphere and below 200 m. Microzooplankton database: doi:10.1594/PANGAEA.779970.


Author(s):  
Kevin D. Friedland ◽  
John R. Moisan ◽  
Aurore A. Maureaud ◽  
Damian C. Brady ◽  
Andrew J. Davies ◽  
...  

Large marine ecosystems (LMEs) are highly productive regions of the world ocean under anthropogenic pressures; we analyzed trends in sea surface temperature (SST), cloud fraction (CF), and chlorophyll concentration (CHL) over the period 1998–2019. Trends in these parameters within LMEs diverged from the world ocean. SST and CF inside LMEs increased at greater rates inside LMEs, whereas CHL decreased at a greater rates. CHL declined in 86% of all LMEs and of those trends, 70% were statistically significant. Complementary analyses suggest phytoplankton functional types within LMEs have also diverged from those characteristic of the world ocean, most notably, the contribution of diatoms and dinoflagellates, which have declined within LMEs. LMEs appear to be warming rapidly and receiving less solar radiation than the world ocean, which may be contributing to changes at the base of the food chain. Despite increased fishing effort, fishery yields in LMEs have not increased, pointing to limitations related to productivity. These changes raise concerns over the stability of these ecosystems and their continued ability to support services to human populations.


1993 ◽  
Vol 67 (S35) ◽  
pp. 1-35 ◽  
Author(s):  
Louie Marincovich

The marine molluscan fauna of the Prince Creek Formation near Ocean Point, northern Alaska, is of Danian age. It is the only diverse and abundant Danian molluscan fauna known from the Arctic Ocean realm, and is the first evidence for an indigenous Paleocene shallow-water biota within a discrete Arctic Ocean Basin faunal province.A high percentage of endemic species, and two endemic genera, emphasize the degree to which the Arctic Ocean was geographically isolated from the world ocean during the earliest Tertiary. Many of the well-preserved Ocean Point mollusks, however, also occur in Danian faunas of the North American Western Interior, the Canadian Arctic Islands, Svalbard, and northwestern Europe, and are the basis for relating this Arctic Ocean fauna to that of the Danian world ocean.The Arctic Ocean was a Danian refugium for some genera that became extinct elsewhere during the Jurassic and Cretaceous. At the same time, this nearly landlocked ocean fostered the evolution of new taxa that later in the Paleogene migrated into the world ocean by way of the northeastern Atlantic. The first Cenozoic occurrences are reported for the bivalves Integricardium (Integricardium), Oxytoma (Hypoxytoma), Placunopsis, Tancredia (Tancredia), and Tellinimera, and the oldest Cenozoic records given for the bivalves Gari (Garum), Neilo, and Yoldia (Cnesterium). Among the 25 species in the molluscan fauna are four new gastropod species, Amauropsis fetteri, Ellipsoscapha sohli, Mathilda (Fimbriatella) amundseni, and Polinices (Euspira) repenningi, two new bivalve genera, Arcticlam and Mytilon, and 15 new bivalve species, Arcticlam nanseni, Corbula (Caryocorbula) betsyae, Crenella kannoi, Cyrtodaria katieae, Gari (Garum) brouwersae, Integricardium (Integricardium) keenae, Mytilon theresae, Neilo gryci, Nucula (Nucula) micheleae, Nuculana (Jupiteria) moriyai, Oxytoma (Hypoxytoma) hargrovei, Placunopsis rothi, Tancredia (Tancredia) slavichi, Tellinimera kauffmani, and Yoldia (Cnesterium) gladenkovi.


Author(s):  
Holthus Paul

This chapter discusses the role of the World Ocean Council (WOC) and the international ocean business community in global ocean governance (GOG). It first provides an overview of the institutional development and profile of the WOC before considering the work and role and work of the WOC on ocean governance with and for the ocean business community. It then examines the Sustainable Development Goals (SDGs) in relation to ocean business and the WOC, as well as the size, complexity trends in the ocean economy and ocean business community, which are fundamental to understanding their importance to GOG. It also analyses GOG issues relevant to the ocean business community and WOC that the United Nations and its associated bodies must address and concludes with an assessment of the role of the ocean business community and WOC in the future of the GOG agenda.


1972 ◽  
Vol 72 (1) ◽  
pp. 273-275
Author(s):  
I. A. Fedosseyev ◽  
A. F. Plakhotnick

Though Russia, in contrast with England, had no broad access to the oceans, Russian oceanographers always took a great interest in the world ocean investigations. To confirm this we would first of all like to mention the Russian cruises around the world, made by I. F. Krusenstern and Ju. F. Lisjansky in 1803–06, V. M. Golovnin in 1806–13 and 1817–19, M. P. Lazarev in 1819–21 and 1822–25 (the second voyage, the main result of which was the discovery of the Antarctic Continent, was made together with F. F. Bellingshauzen), O. E. Kotsebu in 1815–18 and 1823–26, and F. O. Litke in 1826–29. The names of several Russian explorers who carried on important work in various parts of the Arctic and the Pacific Oceans in different periods of the nineteenth century are well known. At one time valuable results of the oceanological investigations, carried out by Admiral S. O. Makarov on the ship Vitjaz in the Pacific Ocean in 1886–89, attracted much attention. The fact that Vitjaz is lettered on the pediment of the Oceanographical Museum of Monaco among the ten ships most distinguished in oceanographical explorations from the whole world testifies to the scientific importance of Makarov's investigations.


2009 ◽  
Vol 6 (1) ◽  
pp. 215-242 ◽  
Author(s):  
T. J. McDougall ◽  
D. R. Jackett ◽  
F. J. Millero

Abstract. To date, density and other thermodynamic properties of seawater have been calculated from Practical Salinity, S P. It is more accurate however to use Absolute Salinity, S A (the mass fraction of dissolved material in seawater). Absolute Salinity S A can be expressed in terms of Practical Salinity S P as S A=(35.165 04 g kg-1/35)S P+δ S A(φ, λ, p) where δ S A is the Absolute Salinity Anomaly as a function of longitude φ, latitude λ and pressure. When a seawater sample has standard composition (i.e. the ratios of the constituents of sea salt are the same as those of surface water of the North Atlantic), the Absolute Salinity Anomaly is zero. When seawater is not of standard composition, the Absolute Salinity Anomaly needs to be estimated; this anomaly is as large as 0.025 g kg−1 in the northernmost North Pacific. Here we provide an algorithm for estimating Absolute Salinity Anomaly for any location (φ, λ, p) in the world ocean. To develop this algorithm we use the Absolute Salinity Anomaly that is found by comparing the density calculated from Practical Salinity to the density measured in the laboratory. These estimates of Absolute Salinity Anomaly however are limited to the number of available observations (namely 811). To expand our data set we take advantage of approximate relationships between Absolute Salinity Anomaly and silicate concentrations (which are available globally). We approximate the laboratory-determined values of δ S A of the 811 seawater samples as a series of simple functions of the silicate concentration of the seawater sample and latitude; one function for each ocean basin. We use these basin-specific correlations and a digital atlas of silicate in the world ocean to deduce the Absolute Salinity Anomaly globally and this is stored as an atlas, δ S A (φ, λ, p). This atlas can be interpolated to the latitude, longitude and pressure of a seawater sample to estimate its Absolute Salinity Anomaly. For the 811 samples studied, ignoring the Absolute Salinity Anomaly results in a standard error in S A of 0.0107 g kg-1. Using our algorithm for δ S A reduces the error to 0.0048 g kg−1, reducing the mean square error by a factor of five. The number of sea water samples used to develop the correlation relationship is limited, and we hope that the algorithm and error can be improved as further data becomes available.


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