scholarly journals Decision letter: Developmentally regulated Tcf7l2 splice variants mediate transcriptional repressor functions during eye formation

2019 ◽  
2019 ◽  
Author(s):  
Rodrigo M Young ◽  
Kenneth B Ewan ◽  
Veronica P Ferrer ◽  
Miguel L Allende ◽  
Jasminka Godovac-Zimmermann ◽  
...  

2019 ◽  
Author(s):  
Rodrigo M. Young ◽  
Kenneth B. Ewan ◽  
Veronica P. Ferrer ◽  
Miguel L. Allende ◽  
Jasminka Godovac-Zimmermann ◽  
...  

AbstractTcf7l2 mediates Wnt/β-Catenin signalling during development and is implicated in cancer and type-2 diabetes. The mechanisms by which Tcf7l2 and Wnt/β-Catenin signalling elicits such a diversity of biological outcomes are poorly understood. Here, we study alternatively spliced tcf7l2 in zebrafish and show that only splice variants that include exon 5 and an analogous human tcf7l2 variant can effectively provide compensatory repressor function to restore eye formation in embryos lacking tcf7l1a/tcf7l1b function. Knockdown of exon 5 specific tcf7l2 variants in tcf7l1a mutants also compromises eye formation and these variants can effectively repress Wnt pathway activity in reporter assays using Wnt target gene promoters. We show that the repressive activities of exon5-coded variants are likely explained by their interaction with Tle co-repressors. Furthermore, phosphorylated residues in Tcf7l2 coded exon5 facilitate repressor activity. Our studies suggest that developmentally regulated splicing of tcf7l2 can influence the transcriptional output of the Wnt pathway.


eLife ◽  
2019 ◽  
Vol 8 ◽  
Author(s):  
Rodrigo M Young ◽  
Kenneth B Ewan ◽  
Veronica P Ferrer ◽  
Miguel L Allende ◽  
Jasminka Godovac-Zimmermann ◽  
...  

Tcf7l2 mediates Wnt/β-Catenin signalling during development and is implicated in cancer and type-2 diabetes. The mechanisms by which Tcf7l2 and Wnt/β-Catenin signalling elicit such a diversity of biological outcomes are poorly understood. Here, we study the function of zebrafish tcf7l2 alternative splice variants and show that only variants that include exon five or an analogous human tcf7l2 variant can effectively provide compensatory repressor function to restore eye formation in embryos lacking tcf7l1a/tcf7l1b function. Knockdown of exon five specific tcf7l2 variants in tcf7l1a mutants also compromises eye formation, and these variants can effectively repress Wnt pathway activity in reporter assays using Wnt target gene promoters. We show that the repressive activities of exon5-coded variants are likely explained by their interaction with Tle co-repressors. Furthermore, phosphorylated residues in Tcf7l2 coded exon5 facilitate repressor activity. Our studies suggest that developmentally regulated splicing of tcf7l2 can influence the transcriptional output of the Wnt pathway.


2000 ◽  
Vol 276 (5) ◽  
pp. 3324-3332 ◽  
Author(s):  
Stephen Rodda ◽  
Shiwani Sharma ◽  
Michaela Scherer ◽  
Gavin Chapman ◽  
Peter Rathjen

2021 ◽  
Author(s):  
Yousra El El Ghaleb ◽  
Nadine J. Ortner ◽  
Wilfried Posch ◽  
Monica L. Fernandez-Quintero ◽  
Wietske E. Tuinte ◽  
...  

The skeletal muscle voltage-gated calcium channel (CaV1.1) primarily functions as voltage sensor for excitation-contraction coupling. Conversely, its ion-conducting function is modulated by multiple mechanisms within the pore-forming α1S subunit and the auxiliary α2δ-1 and γ1 subunits. Particularly, developmentally regulated alternative splicing of exon 29, which inserts 19 amino acids in the extracellular IVS3-S4 loop of CaV1.1a, greatly reduces the current density and shifts the voltage-dependence of activation to positive potentials outside the physiological range. We generated a new HEK293-cell line stably expressing α2δ-1, β3, and STAC3. When the adult (CaV1.1a) and the embryonic (CaV1.1e) splice variants were expressed in these cells, the difference in the voltage-dependence of activation observed in muscle cells was reproduced, but not the reduced current density of CaV1.1a. Only when we further co-expressed the γ1 subunit, the current density of CaV1.1a, but not of CaV1.1e, was reduced by >50 %. In addition, γ1 caused a shift of the voltage-dependence of inactivation to negative voltages in both variants. Thus, the current-reducing effect of γ1, but not its effect on inactivation, is specifically dependent on the inclusion of exon 29 in CaV1.1a. Molecular structure modeling revealed several direct ionic interactions between oppositely charged residues in the IVS3-S4 loop and the γ1 subunit. However, substitution of these residues by alanine, individually or in combination, did not abolish the γ1-dependent reduction of current density, suggesting that structural rearrangements of CaV1.1a induced by inclusion of exon 29 allosterically empower the γ1 subunit to exert its inhibitory action on CaV1.1 calcium currents.


Development ◽  
2021 ◽  
Vol 148 (4) ◽  
pp. dev192674
Author(s):  
Cansu Akkaya ◽  
Dila Atak ◽  
Altug Kamacioglu ◽  
Busra Aytul Akarlar ◽  
Gokhan Guner ◽  
...  

ABSTRACTKIF2A is a kinesin motor protein with essential roles in neural progenitor division and axonal pruning during brain development. However, how different KIF2A alternative isoforms function during development of the cerebral cortex is not known. Here, we focus on three Kif2a isoforms expressed in the developing cortex. We show that Kif2a is essential for dendritic arborization in mice and that the functions of all three isoforms are sufficient for this process. Interestingly, only two of the isoforms can sustain radial migration of cortical neurons; a third isoform, lacking a key N-terminal region, is ineffective. By proximity-based interactome mapping for individual isoforms, we identify previously known KIF2A interactors, proteins localized to the mitotic spindle poles and, unexpectedly, also translation factors, ribonucleoproteins and proteins that are targeted to organelles, prominently to the mitochondria. In addition, we show that a KIF2A mutation, which causes brain malformations in humans, has extensive changes to its proximity-based interactome, with depletion of mitochondrial proteins identified in the wild-type KIF2A interactome. Our data raises new insights about the importance of alternative splice variants during brain development.


1995 ◽  
Vol 305 (2) ◽  
pp. 373-378 ◽  
Author(s):  
A Futatsugi ◽  
G Kuwajima ◽  
K Mikoshiba

The ryanodine receptor is a channel for Ca2+ release from intracellular stores. By PCR analysis, we identified two alternatively spliced regions in mRNA of the mouse skeletal muscle ryanodine receptor (sRyR). The splice variants were characterized by the presence or absence of 15 bp (ASI) and 18 bp (ASII) exons. The exclusion of these exons results in the absence of the regions corresponding to Ala3481-Gln3485 and Val3865-Asn3870, respectively, of rabbit sRyR; these amino acid sequences exist in the modulatory region, where sites for phosphorylation and binding of Ca2+, calmodulin and ATP are postulated to be. We also detected sRyR in brain and heart as well as in skeletal muscle, and the splicing patterns were found to be tissue-specific. Only the ASII-lacking isoform was detected in heart, whereas in other tissues the ASII-containing isoform was predominant. The splicing patterns were also found to change during development. In skeletal muscle, the ASI-containing isoform increased gradually from embryo to adult. The ASII-lacking isoform abruptly increased upon birth, but the ASII-containing isoform increased steadily afterwards. In cerebrum, the ratio of the ASII-containing isoform to the ASII-lacking one increased abruptly during embryonic days 14 and 18. These findings suggest that the alternative splicing of ASI and ASII, by affecting the modulatory region, generates functionally different sRyR isoforms in a tissue-specific and developmentally regulated manner.


2003 ◽  
Vol 14 (9) ◽  
pp. 3507-3518 ◽  
Author(s):  
Ming-Guang Yeh ◽  
Barry L. Ziober ◽  
Baomei Liu ◽  
Galina Lipkina ◽  
Ioannis S. Vizirianakis ◽  
...  

During muscle development, the laminin-specific α7 integrin is alternatively spliced in the putative ligand-binding domain to yield either the α7X1 or the α7X2 variant. The relative level of α7X1 and α7X2 is developmentally regulated. Similarly, the partner β1 integrin cytoplasmic domain is converted from the β1A to the β1D splice variant. To determine whether β1D modulates the activity of the α7 receptor, cells were transfected with α7X1 and β1D cDNA. α7X1 coupled with β1A failed to adhere to laminin-1, whereas cotransfectants expressing α7X1 and β1D showed strong adhesion. Interestingly, α7X1 complexed with β1A and β1D displayed the same level of poor adhesion to laminin-2/4 or strong adhesion to laminin-10/11. These findings indicate that α7 function is regulated not only by X1/X2 in its extracellular domain but also by β1 cytoplasmic splice variants. It is likely that expression of β1D alters α7X1 binding to laminin isoforms by a process related to ligand affinity modulation. Functional regulation of α7β1 by developmentally regulated splicing events may be important during myogenic differentiation and repair because the integrin mediates adhesion, motility, and cell survival.


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