vicia sativa
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Author(s):  
H. Bougrine ◽  
A. Mebarkia ◽  
S. Bechkri

Background: In the present study, we have set a goal, to study the genetic variability and phylogenetic affinities of 26 spontaneous Vicia sativa L. accessions collected in Algeria, as part of the recovery and enhancement of the local genetic heritage and its integration into the breeding and varietal creation programs. Methods: Morphological traits, performance parameters and phenological stages of each accession were tracked during an experimental test in pots under greenhouse conditions from December 29, 2019 to June 1, 2020. An eco-geographical characterization of samples was also carried out through geographical coordinates. On the other side and for the first time in Algeria, soil analyses of each site were undertaken. Result: The phylogenetic study of accessions confirm the taxonomic complexity of the group V. sativa L. According to the principal component analyses and kruskal-Wallis test, the most segregating variables with the highest values and the largest K variance ratios are most of the attributes associated with the flower, pod and seed. The association of the two dissimilarity matrix carried out by a Mantel test between the morphological and eco-geographic parameters showed a significant effect with a p value = 0.004 at the threshold of alpha=0.05 and a correlation coefficient r (AB) = 0.156.


2022 ◽  
Vol 12 ◽  
Author(s):  
Vy Nguyen ◽  
Iain R. Searle

Common vetch (Vicia sativa) is a multi-purpose legume widely used in pasture and crop rotation systems. Vetch seeds have desirable nutritional characteristics and are often used to feed ruminant animals. Although transcriptomes are available for vetch, problems with genetic transformation and plant regeneration hinder functional gene studies in this legume species. Therefore, the aim of this study was to develop a simple, efficient and rapid hairy root transformation system for common vetch to facilitate functional gene analysis. At first, we infected the hypocotyls of 5-day-old in vitro or in vivo, soil-grown seedlings with Rhizobium rhizogenes K599 using a stabbing method and produced transgenic hairy roots after 24 days at 19 and 50% efficiency, respectively. We later improved the hairy root transformation in vitro by infecting different explants (seedling, hypocotyl-epicotyl, and shoot) with R. rhizogenes. We observed hairy root formation at the highest efficiency in shoot and hypocotyl-epicotyl explants with 100 and 93% efficiency, respectively. In both cases, an average of four hairy roots per explant were obtained, and about 73 and 91% of hairy roots from shoot and hypocotyl-epicotyl, respectively, showed stable expression of a co-transformed marker β-glucuronidase (GUS). In summary, we developed a rapid, highly efficient, hairy root transformation method by using R. rhizogenes on vetch explants, which could facilitate functional gene analysis in common vetch.


2022 ◽  
Vol 81 (1) ◽  
Author(s):  
Iskender Tiryaki ◽  
Nuray Isidogru

The objectives of the present study were to determine salt tolerance levels of 12 different common vetch (Vicia sativa L.) cultivars at germination stage in the presence of 250 mM NaCl and to reveal genetic relationships based on gene targeted functional markers (GTFMs) associated with salt tolerance. The results revealed the presence of a significant genetic variation among the cultivars although s alt stress significantly reduced all germination parameters tested. The cultivar Ozveren was the most salt tolerant with 20.1% reduction in final germination percentage compared to control seeds while cultivars Alınoglu, Ayaz and Bakir did not germinate. The maximum delays in germination rate (G50 = 3.78 days) and synchrony (G10-90 = 3.45 days) were obtained from the cultivars Urkmez and Ozveren, respectively. The GTFMs provided a total of 53.1% polymorphism. The primers of MtSOS2 gene gave the highest numbers of alleles per primer pair while the highest polymorphism rate (77.8%) was obtained from the MtP5CS gene. The first three components of principal component analysis explained 57.63% of total variation. This study concluded that the cultivars determined to be salt tolerant and sensitive at germination stage distributed into three main clades determined by UPGMA analysis while the GTFMs associated with salt tolerance successfully determined the genetic relationships of common vetch cultivars.


2021 ◽  
Vol 9 (1) ◽  
pp. 58-67
Author(s):  
Maria Raquel Lopes do Nascimento ◽  
Valentina Franco Minuzzi ◽  
Amom Jecelé Machado Leal ◽  
Pamela Suelin Lamb ◽  
Sabrina Nascimento Horz ◽  
...  

As plantas daninhas competem diretamente com as culturas implantadas, e essa competição, muitas vezes, pode causar problemas irreversíveis. Esse trabalho tem como objetivo avaliar o efeito de diferentes espécies de coberturas de solo cultivadas consorciadas ou em cultivo solteiro, sob a supressão de plantas daninhas e desenvolvimento inicial da cultura da soja (Glycine max). O experimento foi conduzido no ano agrícola de 2020/2021, na Área Experimental da Fazenda Escola da Universidade de Cruz Alta, na cidade de Cruz Alta/RS. Onde foram semeados 8 (oito) tratamentos, constituídos por 7 (sete) plantas de coberturas de inverno, utilizadas isoladas e em consórcio e 1 tratamento deixado em pousio (Testemunha), no período do inverno. No pleno florescimento das mesmas, foram feitas coletas para quantificar a massa seca e massa verde produzida. E posterior realizou-se a dessecação e a semeadura da soja. Aos 7 e 15 DAE (Dias Após a Emergência), foram realizadas analises para avaliar o desenvolvimento inicial da cultura, sendo aos 7 DAE quantificado o número de plântulas emergidas, e aos 15 DAE analisadas altura de plantas. O uso de plantas de coberturas de solo representa grande vantagem ao produtor, no sentido que reduz o potencial de competição das plantas daninhas.  Cobertura de inverno proporcionada pelo consórcio de aveia preta (Avena strigosa) + nabo forrageiro (Raphanus sativus) + ervilhaca (Vicia sativa) desempenha papel supressor sobre plantas daninhas infestantes, em especial a buva (Conyza spp.), permitindo melhor desenvolvimento inicial da cultura da soja.


2021 ◽  
Vol 9 (2) ◽  
pp. 107-112
Author(s):  
Agáta Fargašová ◽  
Jana Lištiaková

For genotoxicity study simultaneous phytotoxicity and mutagenicity assay with Vicia sativa L. var. Klára was used. For phytotoxicity the following rank orders of growth inhibition can be arranged: for roots: Ni(II) > Cr(VI) > Cr(III); for shoots: Ni(II) > Cr(VI) ≥ Cr (III). For mutagenicity assay root tips of V. sativa were used and chromosome aberrations were determined at least in 500-anatelophases. All tested metals exerted in V. sativa a significant increase of chromosomal aberration rate in applied concentrations. Maximum of aberrations invoked Cr(VI) and the rank order of aberrations fall was: Cr(VI) > Ni(II) > Cr(III). Genotoxic effects of metals were determined by analysis of micronuclei frequency in the pollen tetrads of Tradescantia plants. None of tested metal significantly stimulated micronuclei frequency and genotoxic effect was decreased in order: Cr(VI) ≥ Ni(II) > Cr(III).


Author(s):  
Lin Ma ◽  
Xiao Wang ◽  
Min Yan ◽  
Fang Liu ◽  
Shuxing Zhang ◽  
...  

Abstract Background Common vetch (Vicia sativa L.) is an annual legume with excellent suitability in cold and dry regions. Despite its great applied potential, the genomic information regarding common vetch currently remains unavailable. Methods and results In the present study, the whole genome survey of common vetch was performed using the next-generation sequencing (NGS). A total of 79.84 Gbp high quality sequence data were obtained and assembled into 3,754,145 scaffolds with an N50 length of 3556 bp. According to the K-mer analyses, the genome size, heterozygosity rate and GC content of common vetch genome were estimated to be 1568 Mbp, 0.4345 and 35%, respectively. In addition, a total of 76,810 putative simple sequence repeats (SSRs) were identified. Among them, dinucleotide was the most abundant SSR type (44.94%), followed by Tri- (35.82%), Tetra- (13.22%), Penta- (4.47%) and Hexanucleotide (1.54%). Furthermore, a total of 58,175 SSR primer pairs were designed and ten of them were validated in Chinese common vetch. Further analysis showed that Chinese common vetch harbored high genetic diversity and could be clustered into two main subgroups. Conclusion This is the first report about the genome features of common vetch, and the information will help to design whole genome sequencing strategies. The newly identified SSRs in this study provide basic molecular markers for germplasm characterization, genetic diversity and QTL mapping studies for common vetch.


2021 ◽  
Vol 32 (5) ◽  
pp. e21339
Author(s):  
Alberto Arias A. ◽  
Juancarlos Cruz L. ◽  
Cesar Pantoja A. ◽  
José Contreras P. ◽  
Melina Lopez R.
Keyword(s):  

El estudio se realizó en el Centro Experimental Alpaicayán, Universidad Nacional Daniel Alcides Carrión, Pasco, Perú, con el objetivo fue determinar la producción forrajera y calidad nutricional de la avena asociada con vicia. Se determinó la producción forrajera en contenidos de materia verde (MV), materia seca (MS) y el porcentaje de materia seca (%MS). Para el valor nutricional se determinaron la proteína cruda (%PC), fibra detergente neutro (%FDN), fibra detergente ácido (%FDA), calcio (%Ca) y fósforo (%P). Los tratamientos fueron T-1 (avena criolla, 150 kg/ha), T-2 (avena Mantaro 15, 110 kg/ha), T- 3 (avena Mantaro 15 más vicia, 110 y 30 kg/ha) y T-4 (avena criolla más vicia, 150 y 30 kg/ha). La producción de MV indicó que T-1 y T-4 fue similar, pero significativamente superior a T-2 y T-3 (p<0.05); sin embargo, sin diferencias significativas en producción de MS entre tratamientos. T-4 obtuvo mayor contenido de %PC, T-2 y T-4 presentaron los mayores rendimientos de %FDN y %FDA. T-4 presentó el mayor contenido de %P, en tanto que no hubo diferencias entre tratamientos para el contenido de %Ca. Se concluye que el tratamiento Mantaro 15 +vicia tiene una mejor producción forrajera y es de mejor calidad nutricional en referencia a los otros tratamientos.  


2021 ◽  
Author(s):  
Hangwei Xi ◽  
Vy nguyen ◽  
Christopher M Ward ◽  
Iain R Searle

Background: Vicia sativa L. (Common Vetch, n = 6) is an annual, herbaceous, climbing legume that is distributed in tropical, sub-tropical and temperate climates. Originating in the Fertile Crescent of the Middle East, V. sativa is now widespread and grows in the Mediterranean basin, West, Central and Eastern Asia, North and South America. V. sativa is of economic importance as a forage legume in countries such as Australia, China, and the USA and contributes valuable nitrogen to agricultural rotation cropping systems. To accelerate precision genome breeding and genomics-based selection of this legume, we here present a chromosome-level reference genome sequence for V. sativa. Results: We applied a combination of long-read Oxford Nanopore sequencing, short-read Illumina sequencing, and high-throughput chromosome conformation data (CHiCAGO and Hi-C) analysis to construct a chromosome-level genome of V. sativa. The chromosome-level assembly of six pseudo-chromosomes has a total genome length of 1.9 gigabases (Gb) with a median contig length of 684 kb. Benchmarking Universal Single-Copy Orthologs (BUSCO) of the assembly demonstrated a very high completeness of 98 % of the dicotyledonous orthologs. RNA-seq analysis and gene modelling enabled the annotation of 58,415 protein-coding genes. Conclusions: The high-quality chromosome-level genome assembly of V. sativa will provide novel insights into vetch genome evolution and be a valuable resource for genomic breeding, genetic diversity and for understanding adaption to diverse arid environments.


Plant Direct ◽  
2021 ◽  
Vol 5 (10) ◽  
Author(s):  
Kenta Shirasawa ◽  
Shunichi Kosugi ◽  
Kazuhiro Sasaki ◽  
Andrea Ghelfi ◽  
Koei Okazaki ◽  
...  

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