scholarly journals Determination of salt tolerance levels and genetic relationships of Vicia sativa cultivars using gene targeted functional markers

2022 ◽  
Vol 81 (1) ◽  
Author(s):  
Iskender Tiryaki ◽  
Nuray Isidogru
Keyword(s):  
Salt Tolerance ◽  
Genetic Relationships ◽  
Germination Rate ◽  
Principal Component ◽  
Germination Percentage ◽  
Functional Markers ◽  
Vicia Sativa ◽  
Salt Tolerant ◽  
Common Vetch ◽  
Germination Stage

The objectives of the present study were to determine salt tolerance levels of 12 different common vetch (Vicia sativa L.) cultivars at germination stage in the presence of 250 mM NaCl and to reveal genetic relationships based on gene targeted functional markers (GTFMs) associated with salt tolerance. The results revealed the presence of a significant genetic variation among the cultivars although s alt stress significantly reduced all germination parameters tested. The cultivar Ozveren was the most salt tolerant with 20.1% reduction in final germination percentage compared to control seeds while cultivars Alınoglu, Ayaz and Bakir did not germinate. The maximum delays in germination rate (G50 = 3.78 days) and synchrony (G10-90 = 3.45 days) were obtained from the cultivars Urkmez and Ozveren, respectively. The GTFMs provided a total of 53.1% polymorphism. The primers of MtSOS2 gene gave the highest numbers of alleles per primer pair while the highest polymorphism rate (77.8%) was obtained from the MtP5CS gene. The first three components of principal component analysis explained 57.63% of total variation. This study concluded that the cultivars determined to be salt tolerant and sensitive at germination stage distributed into three main clades determined by UPGMA analysis while the GTFMs associated with salt tolerance successfully determined the genetic relationships of common vetch cultivars.

scholarly journals Evaluation of Salt Tolerance at Germination Stage in Cowpea [Vigna unguiculata (L.) Walp]

HortScience ◽  
2017 ◽  
Vol 52 (9) ◽  
pp. 1168-1176 ◽  
Author(s):  
Waltram Second Ravelombola ◽  
Ainong Shi ◽  
Yuejin Weng ◽  
John Clark ◽  
Dennis Motes ◽  
...  
Keyword(s):  
Salt Tolerance ◽  
Seed Germination ◽  
Salinity Stress ◽  
Germination Rate ◽  
Correlation Coefficients ◽  
Human Consumption ◽  
Tolerance Index ◽  
Salt Tolerant ◽  
Salt Tolerance Index ◽  
Germination Stage

Cowpea is a leguminous and versatile crop which provides nutritional food for human consumption. However, salinity unfavorably reduces cowpea seed germination, thus significantly decreasing cowpea production. Little has been done for evaluating and developing salt-tolerant cowpea genotypes at germination stage. The objectives of this research were to evaluate the response of cowpea genotypes to salinity stress through seed germination rate and to select salt-tolerant cowpea genotypes. The seed germination rates under nonsalt condition and salinity stress (150 mm NaCl) were evaluated in 151 cowpea genotypes. Four parameters, absolute decrease (AD), the inhibition index (II), the relative salt tolerance (RST), and the salt tolerance index (STI) were used to measure salt tolerance in cowpea. The results showed that there were significant differences among the 151 cowpea genotypes for all parameters (P values <0.0001). The AD in germination rate was 5.8% to 94.2%; the II varied from 7.7% to 100%; the RST ranged from 0 to 0.92; and STI varied from 0 to 0.92. A high broad sense heritability (H2) was observed for all four parameters. High correlation coefficients (r) were estimated among the four parameters. PI582422, 09–529, PI293584, and PI582570 were highly salt tolerant at germination stage. In addition, genotypes from the Caribbean and Southern Asia exhibited better tolerance to salinity, whereas those from Europe and North America were the most salt-susceptible.

scholarly journals Assessing Salicornia europaea Tolerance to Salinity at Seed Germination Stage

Agriculture ◽  
2020 ◽  
Vol 10 (2) ◽  
pp. 29
Author(s):  
Roberta Calone ◽  
Rabab Sanoubar ◽  
Enrico Noli ◽  
Lorenzo Barbanti
Keyword(s):  
Salt Tolerance ◽  
Seed Germination ◽  
Germination Rate ◽  
Principal Component ◽  
Germination Percentage ◽  
Salicornia Europaea ◽  
Salinity Levels ◽  
Mean Germination Time ◽  
Germination Value ◽  
Peak Value

Salicornia europaea, a halophytic species, was investigated to assess its ability to withstand salinity during seed germination, and to identify suitable indices to interpret salt tolerance at this delicate stage. Seed germination indices (germination percentage (GP), germination energy (GE), germination value (GV), coefficient of germination velocity (CVG), germination rate index (GRI), germination peak value (GPV), mean germination time (MGT), and time to 50% germination (T50)) were calculated under increasing salinity (0, 100, 200, 300, 400, and 600 mM NaCl). Principal component analysis (PCA) was used to describe the relationships involving the variables that account for data variance. Two salinity thresholds were identified (100 and 600 mM NaCl) determining significant decreases in all the indices, except for T50 and MGT. In fact, PCA based on generated correlation circle showed significant negative correlations (r close to −1) between salt stress and GP, GE, GRI, PV, GV, and CVG, whereas no correlation was observed with T50 and MGT (r close to zero). Based on this, GP, GE, GRI, PV, GV, and CVG can be considered useful traits to assess salt tolerance during germination in S. europaea, while T50 and MGT, that were not affected by the range of salinity levels investigated, should not be used for this purpose.

Responses of seed germination, seedling growth under salinity stresses and variability for phenotypic traits in Tossa Jute (Corchorus olitorius L.)

2021 ◽  
Vol 8 (1) ◽  
Author(s):  
Md. Mia Mukul ◽  
Sheikh Shorif Uddin Ahmed ◽  
Nargis Akter ◽  
Md. Golam Mostofa ◽  
Md. Sohanur Rahman ◽  
...  
Keyword(s):  
Salt Tolerance ◽  
Seed Germination ◽  
Germination Rate ◽  
Phenotypic Traits ◽  
Tolerance Index ◽  
Corchorus Olitorius ◽  
Salt Tolerant ◽  
Fiber Yield ◽  
Good For ◽  
Salt Tolerance Index

Salinity is a serious abiotic stress to Jute and other crop cultivation at saline regions in the world. No salt tolerant Tossa Jute (Corchorus olitorius L.) variety was developed in Bangladesh. Hence, six Tossa Jute accessions were investigated at germination stage against six concentration levels (0.00 or d.H2O, 8.0, 10.0, 12.0, 14.0 and 16.0 dS m-1) of salt (NaCl) using RCB design at Bangladesh Jute Research Institute (BJRI) during March-July, 2020. Jute seeds collected from Gene Bank of BJRI were allowed to germinate under laboratory condition. Seed germination rate was adversely affected as well as delay in germination was prolonged with increasing the salt concentration. In control, seeds were germinated up to 14.0 dS m-1 salt solution. Among six genotypes, Acc. 1141 and Acc. 3801 showed the highest germination rate (86.67 %); Acc. 3801 gave maximum root length (17.0 mm), dry biomass (6.37 mg); and Acc. 1089 showed higher shoot length (10.0 mm), fresh weight (43.93 mg) and salt tolerance index (60.69 %) under 14.0 dS m-1 level. Higher relative salt harm rate (7.14 %) was observed in both Acc. 1141 and Acc. 3801 under 14.0 dS m-1 salinity indicating highly tolerance to salinity. Acc. 3801 and Acc. 1141 were found good for germination under salt stresses; Acc. 3801, Acc. 1089 for fiber yield and salt tolerance; Acc. 3801 and Acc. 1407 for higher fiber yield. Acc. 3801 was found good for salt tolerance and fiber yield content. The genotypes with good desirable characters would be used as breeding materials to develop high yielding salt tolerant Tossa Jute variety.

Germination in Stylosanthes humilis Populations in the Presence of NaCl

1994 ◽  
Vol 42 (6) ◽  
pp. 717 ◽  
Author(s):  
MB Lovato ◽  
PS Martins ◽  
Filho JPD Lemos
Keyword(s):  
Salt Tolerance ◽  
Significant Variation ◽  
Germination Rate ◽  
Natural Populations ◽  
Germination Percentage ◽  
Percentage Germination ◽  
North East ◽  
Germination Response ◽  
Stylosanthes Humilis

The germination response to NaCl treatments (0, 67, 134, 201 and 268 mol m-3) was investigated in 6 natural populations of Stylosanthes humilis from 3 ecogeographic regions of Pernambuco State, north-east Brazil. In general, salt tolerance was high, with percentage germination unaltered up to 67 mol m-3 NaCl in 2 populations and unaltered up to 134 mol m-3 NaCl in the remaining 4. The estimated concentration which reduced percentage germination to 50% varied between populations from 200 to 295 mol m-3 NaCl. Salt affected germination rate even more than it did the germination percentage, being altered at 67 mol m-3 NaCl in all populations. The germination rate was reduced to 50% in the range of 131-176 mol m-3 NaCl. There was a significant variation in salt tolerance between these natural populations, and no relation was found between salt tolerance of the populations and the aridity of their provenance.

scholarly journals Germination of dimorphic seeds of Suaeda moquinii under high salinity stress

2001 ◽  
Vol 49 (2) ◽  
pp. 185 ◽  
Author(s):  
M. Ajmal Khan ◽  
Bilquees Gul ◽  
Darrell J. Weber
Keyword(s):  
Seed Germination ◽  
Salt Marshes ◽  
High Salinity ◽  
Germination Rate ◽  
Western United States ◽  
Regression Analyses ◽  
Salt Tolerant ◽  
The Family ◽  
Black Seeds ◽  
Germination Stage

Suaeda moquinii (Torrey) Greene (desert blite), a succulent shrub in the family Chenopodiaceae, is widely distributed in salt marshes of the western United States. Suaeda moquinii produces dimorphic seeds (soft brown and hard black). Both types of seeds were collected from a salt marsh in Faust, Utah. Experiments were conducted to determine the seed germination responses of the black and brown seeds to salinity and temperature. Brown seeds were found to be one of the most salt tolerant at the germination stage when compared to other halophytes. Brown seeds germinated (30%) at 1000 mM NaCl, but only a few black seeds germinated (8%) at 600 mM NaCl. Seed germination occurred in most saline treatments at the lowest thermoperiod (5–15˚C) tested. In some salinity treatments (600, 800, 1000 mM), further increases in temperature resulted in progressively decreased seed germination. Brown seeds germinated better and had a higher germination rate (germination velocity) than black seeds at all thermoperiods. The highest rate of germination of black seeds occurred at the lowest thermoperiod (5–15˚C). Recovery of germination for black seeds when transferred to distilled water after being in various salinity treatments for 20 days was nearly complete (82–100%) at the lowest thermoperiod (5–15˚C) but decreased with increase in the temperature. Brown seeds recovered substantially (59–97%) from salinity at all thermoperiods. Regression analyses indicated significant differences between the germination recovery of the black and brown seeds.

Comparative studies on salt tolerance of seedlings for one cultivar of puccinellia (Puccinellia ciliata) and two cultivars of tall wheatgrass (Thinopyrum ponticum)

2005 ◽  
Vol 45 (4) ◽  
pp. 391 ◽  
Author(s):  
B. Zhang ◽  
B. C. Jacobs ◽  
M. O'Donnell ◽  
J. Guo
Keyword(s):  
Salt Stress ◽  
Salt Tolerance ◽  
Seed Germination ◽  
Germination Rate ◽  
Seedling Emergence ◽  
Salt Tolerant ◽  
Mineral Contents ◽  
Shoot Height ◽  
Thinopyrum Ponticum ◽  
Tall Wheatgrass

Salt tolerances of 3 cultivars, Menemen puccinellia (Puccinellia ciliata Bor), Tyrrell and Dundas [tall wheatgrass, Thinopyrum ponticum (Podp.) Z. W. Liu and R. R. C. Wang], were compared with respect to their seed germination, adaptive responses to salt and waterlogging, seedling emergence, plant growth, shoot osmolality and mineral contents in a series of salt-stress experiments. An inverse normal distribution provided good fits for the time to seed germination. Under NaCl stress, 50% of the control (distilled water) seed germination rates of Menemen, Tyrrell and Dundas were achieved in 178.8, 300.9 and 296.8 mmol/L NaCl, respectively. Fifty percent of the control seedling emergence rates of these 3 cultivars were in 92.7, 107.2 and 113.5 mmol/L NaCl, respectively. The seed germination rates of these 3 cultivars under both salt and waterlogging stress were far lower than those germinated only under salt stress at the same salt level. Seed pretreatment by soaking seed in NaCl solutions greatly increased the seed germination rate under salt stress for Menemen and under both salt stress and waterlogging for Dundas. Tyrrell and Dundas were very similar in their tolerance to salt stress, and were significantly (P<0.05) more salt tolerant than Menemen in terms of seed germination and seedling emergence rate. Both shoot height and dry matter of these 3 cultivars were not statistically different among all salt stress levels during the seedling elongation period, indicating that the established plants of these 3 cultivars were very salt tolerant. The salt tolerance mechanisms of these 3 cultivars are possibly related to their abilities to maintain high osmolality in shoots by regulating high sodium and potassium contents, and reducing calcium deficiency under salt stress.

scholarly journals Comprehensive Evaluation of Salt Tolerance in Asparagus Germplasm Accessions (Asparagus officinalis L.) at Different Growth Stages

2021 ◽  
Vol 2021 ◽  
pp. 1-10
Author(s):  
Huimin Gao ◽  
Xuhong Zhang ◽  
Yuqin Liang ◽  
Lingdi Dong ◽  
Changzhi Han ◽  
...  
Keyword(s):  
Salt Tolerance ◽  
Adult Stage ◽  
Seedling Stage ◽  
Asparagus Officinalis ◽  
Growth Stages ◽  
Salt Tolerant ◽  
Aboveground Part ◽  
The Mean ◽  
Germplasm Accessions ◽  
Germination Stage

The screening and cultivation of salt-tolerant crops are becoming more and more important owing to the constant increase in the saline soil area worldwide. Asparagus (A. officinalis L.) is a highly nutritious vegetable crop and widely consumed globally for a long time; however, little research has been done on asparagus. In this study, the salt tolerance of 95 asparagus germplasm accessions was evaluated at three growth stages (germination, seedling, and adult stages) under both salt-stressed and control conditions. Results showed that the growth parameters of most germplasm accessions were obviously inhibited by salt stress. The mean value of the seed germination rate at the germination stage decreased by half under salt-stressed conditions, the mean salt-injury index at the seedling stage reached 57.68%, and the fresh weight of the aboveground part (FWA) and the dry weight of the aboveground part (DWA) decreased the most among the traits determined at the adult stage by more than 60%. Our study screened out 30, 19, and 18 tolerant germplasm accessions (including highly salt-tolerant and salt-tolerant germplasm accessions) at the germination stage, seedling stage, and adult stage, respectively. Among them, two germplasm accessions (Ji08-2 and Jx1502) were simultaneously identified to be tolerant in all three growth stages, while other germplasm accessions were tolerant only at one or two stages. Thus, the salt tolerance of asparagus has periodic characteristics and changes throughout the lifecycle, and the identification of salt tolerance at all the main growth stages facilitates adequate assessment and application of tolerant germplasm accessions.

scholarly journals Large-scale integrated evaluation of salt tolerance in japonica rice at the germination stage

2020 ◽  
Author(s):  
Xiu Jing ◽  
Ping Mi ◽  
Xianzhi Xie ◽  
Baoshan Wang
Keyword(s):  
Mathematical Model ◽  
Salt Stress ◽  
Salt Tolerance ◽  
Large Scale ◽  
Crop Yields ◽  
Japonica Rice ◽  
Rice Cultivars ◽  
Salt Tolerant ◽  
Fresh Weight ◽  
Germination Stage

Abstract Background: Salt stress, one of the most important abiotic stresses, severely reduces crop yields. Identifying salt-tolerant rice germplasm resources at the germination stage, developing salt tolerance indicators, and cultivating salt-tolerant rice cultivars are crucial for improving rice production in saline soil.Results: We measured the germination parameters of 140 japonica rice cultivars on the 7 day after sowing (DAS) in 0 and 150 mmol L−1 NaCl. To accurately assess salt tolerance and identify reliable indicators of salt tolerance, we measured the shoot length (SL), root length (RL), root fresh weight (RFW), shoot fresh weight (SFW), total fresh weight (TFW) and salt tolerance (STI) index after 7 days of salt-stress treatment. The 140 rice cultivars were divided into four categories based on the mean MFVs: highly salt tolerant (HST: 19 cultivars), salt tolerant (ST: 74 cultivars), weakly salt tolerant (WST: 43 cultivars), and salt sensitive (SS: 4 cultivars). Based on the physiological indicators, we established a mathematical model to accurately evaluate salt tolerance in japonica rice cultivars. STI of TFW under 150 mmol L−1 NaCl treatment showed the highest correlation with salt tolerance during the germination stage.Conclusions: We determined the optimum NaCl concentration (150 mmol L−1) for evaluating salt tolerance in japonica rice at the germination stage. We identified 19 HST, 74 ST, 43 WST, and 4 SS japonica rice cultivars during the germination stage and proposed a mathematical model to evaluate salt tolerance. STI of TFW is a reliable, accurate indicator for evaluating salt tolerance in japonica rice. These findings should greatly facilitate the evaluation of japonica rice cultivars during seed germination and the breeding of salt-tolerant rice cultivars.

Evaluation of salt-tolerant germplasm and screening of the salt-tolerance traits of sweet sorghum in the germination stage

2018 ◽  
Vol 45 (10) ◽  
pp. 1073 ◽  
Author(s):  
Tonglou Ding ◽  
Zhen Yang ◽  
Xiaocen Wei ◽  
Fang Yuan ◽  
Shanshan Yin ◽  
...  
Keyword(s):  
Salt Tolerance ◽  
Sweet Sorghum ◽  
Development Process ◽  
Salt Tolerant ◽  
Comprehensive Index ◽  
Starting Point ◽  
High Salt Tolerance ◽  
Sorghum Bicolor L ◽  
Germination Stage ◽  
Selection Of

Soil salinity is one of the major abiotic stresses that reduces agricultural productivity and affects large terrestrial areas around the world. Germination is the starting point of the growth and development process of all crops, and it is severely affected by salt stress. Sweet sorghum (Sorghum bicolor (L.) Moench.) is one of the most promising crops that has a relatively high salt tolerance and biomass. However, few studies have evaluated the salt tolerance or screened the reliable evaluation traits of sweet sorghum. In this study, the membership function value of five traits was used as a comprehensive index for the evaluation and selection of salt tolerance in 300 sweet sorghum germplasms. After salt tolerance evaluation, 23 highly salt-tolerant, 38 salt-tolerant, 195 moderately salt-tolerant, 38 salt-sensitive and 6 highly salt-sensitive germplasms during the germination stage were screened. Moreover, the germination index under the 200 mM NaCl treatment showed the highest correlation with salt tolerance during the germination stage. This information can be used for effectively evaluating sweet sorghum during the germination stage. These results are important for the evaluation of the salt tolerance of sweet sorghum germplasms during the germination stage.

scholarly journals Genome-wide association and differential expression analysis of salt tolerance in Gossypium hirsutum L at the germination stage

2019 ◽  
Vol 19 (1) ◽  
Author(s):  
Yanchao Yuan ◽  
Huixian Xing ◽  
Wenguan Zeng ◽  
Jialing Xu ◽  
Lili Mao ◽  
...  
Keyword(s):  
Salt Stress ◽  
Salt Tolerance ◽  
Candidate Genes ◽  
Upland Cotton ◽  
Differentially Expressed ◽  
Genome Wide Association ◽  
Rna Seq ◽  
Salt Tolerant ◽  
Genome Wide ◽  
Germination Stage

Abstract Background Salinity is a major abiotic stress seriously hindering crop yield. Development and utilization of tolerant varieties is the most economical way to address soil salinity. Upland cotton is a major fiber crop and pioneer plant on saline soil and thus its genetic architecture underlying salt tolerance should be extensively explored. Results In this study, genome-wide association analysis and RNA sequencing were employed to detect salt-tolerant qualitative-trait loci (QTLs) and candidate genes in 196 upland cotton genotypes at the germination stage. Using comprehensive evaluation values of salt tolerance in four environments, we identified 33 significant single-nucleotide polymorphisms (SNPs), including 17 and 7 SNPs under at least two and four environments, respectively. The 17 stable SNPs were located within or near 98 candidate genes in 13 QTLs, including 35 genes that were functionally annotated to be involved in salt stress responses. RNA-seq analysis indicated that among the 98 candidate genes, 13 were stably differentially expressed. Furthermore, 12 of the 13 candidate genes were verified by qRT-PCR. RNA-seq analysis detected 6640, 3878, and 6462 differentially expressed genes at three sampling time points, of which 869 were shared. Conclusions These results, including the elite cotton accessions with accurate salt tolerance evaluation, the significant SNP markers, the candidate genes, and the salt-tolerant pathways, could improve our understanding of the molecular regulatory mechanisms under salt stress tolerance and genetic manipulation for cotton improvement.

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