Effect of Municipal Solid Waste Compost on Antimony Mobility, Phytotoxicity and Bioavailability in Polluted Soils

The effect of a municipal solid waste compost (MSWC), added at 1 and 2% rates, on the mobility, phytotoxicity, and bioavailability of antimony (Sb) was investigated in two soils (SA: acidic soil; SB: alkaline soil), spiked with two Sb concentrations (100 and 1000 mg kg−1). The impact of MSWC on microbial activity and biochemical functioning within the Sb-polluted soils was also considered. MSWC addition reduced water-soluble Sb and favored an increase in residual Sb (e.g., by 1.45- and 1.14-fold in SA-100 and SA-1000 treated with 2% MSWC, respectively). Significant increases in dehydrogenase activity were recorded in both the amended soils, as well as a clear positive effect of MSWC on the metabolic activity and catabolic diversity of respective microbial communities. MSWC alleviated Sb phytotoxicity in triticale plants and decreased Sb uptake by roots. However, increased Sb translocation from roots to shoots was recorded in the amended soils, according to the compost rate. Overall, the results obtained indicated that MSWC, particularly at a 2% rate, can be used for the recovery of Sb-polluted soils. It also emerged that using MSWC in combination with triticale plants can be an option for the remediation of Sb-polluted soils, by means of assisted phytoextraction.

Bioremediation of engine-oil contaminated soil using local residual organic matter

Soil remediation industries continue to seek technologies to speed-up treatment and reduce operating costs. Some processes are energy intensive and, in some cases, transport can be the main source of carbon emissions. Residual fertilizing materials (RFM), such as organic residues, have the potential to be beneficial bioremediation agents. Following a circular economy framework, we investigated the feasibility of sourcing RFMs locally to reduce transport and assess possible bioremediation efficiency gains. RFMs were recruited within 100 km of the treatment site: ramial chipped wood (RCW), horse manure (MANR) and brewer spent grain (BSG). They were added to the land treatment unit’s baseline fertilizer treatment (FERT, “F”) to measure if they improved the remediation efficiency of an engine oil-contaminated soil (7,500 ± 100 mg kg−1). Results indicate that MANR-F was the only amendment more effective than FERT for petroleum hydrocarbons (PHC) reduction, while emitting the least CO2 overall. RCW-F was equivalent to FERT but retained more moisture. Although BSG contributed the most nitrogen to the soil, BSG-F retained excessive moisture, emitted more volatile organic compounds, contained less soil O2, and was less effective than the baseline treatment. Significantly more of the C16–C22 fraction was removed (63% ± 22%) than all other fractions (C22–C28, C28–C34, C34–C40), which were equally removed. Microbial community-level physiological profiling was conducted with Biolog Ecoplates™, and catabolic diversity differed between treatments (utilization rates of 31 carbon sources). MANR-F has the potential to increase PHC-remediation speed and efficiency compared to inorganic fertilizer alone. Other RFM promote moisture retention and diverse microbial catabolic activity. A variety of RFM are present across the globe and some can offer low-cost amendments to boost remediation efficiency, while reducing treatment time compared to traditional fertilizer-only methods.

Bioremediation of engine-oil contaminated soil using local residual organic matter

Soil remediation industries continue to seek technologies to speed-up treatment and reduce operating costs. Some processes are energy intensive and, in some cases, transport can be the main source of carbon emissions. Residual fertilizing matter (RFM), such as organic residues, have the potential to be beneficial bioremediation agents. Following a circular economy framework, we investigated the feasibility of sourcing RFMs locally to reduce transport and assess possible bioremediation efficiency gains. RFMs were recruited within 100 km of the treatment site: ramial chipped wood (RCW), horse manure (MANR) and brewer spent grain (BSG). They were added to the land treatment unit’s baseline fertilizer treatment (FERT, ‘F’) to measure if they improved the remediation efficiency of an engine oil-contaminated soil (7500 ± 100 mg kg-1). Results indicate that MANR-F was the only amendment more effective than FERT for PHC reduction, while emitting the least CO2overall. RCW-F was equivalent to FERT but retained more moisture. Although BSG contributed the most nitrogen to the soil, BSG-F retained excessive moisture, emitted more VOCs, contained less soil O2, and was less effective than the baseline treatment. Significantly more of the C16-C22fraction was removed (63 ± 22%) than all other fractions (C22-C28, C28-C34, C34-C40), which were equally removed. Microbial community-level physiological profiling (CLPP) was conducted with Biolog EcoplatesTM, and catabolic diversity differed between treatments (utilization rates of 31 carbon sources). MANR-F has the potential to increase PHC-remediation speed and efficiency compared to inorganic fertilizer alone. Other RFM promote moisture retention and diverse microbial catabolic activity. A variety of RFM are present across the globe and some can offer low-cost amendments to boost remediation efficiency, while reducing treatment time compared to traditional fertilizer-only methods.

Bioremediation of engine-oil contaminated soil using local residual organic matter

Soil remediation industries continue to seek technologies to speed-up treatment and reduce operating costs. Some processes are energy intensive and, in some cases, transport can be the main source of carbon emissions. Residual fertilizing matter (RFM), such as organic residues, have the potential to be beneficial bioremediation agents. Following a circular economy framework, we investigated the feasibility of sourcing RFMs locally to reduce transport and assess possible bioremediation efficiency gains. RFMs were recruited within 100 km of the treatment site: ramial chipped wood (RCW), horse manure (MANR) and brewer spent grain (BSG). They were added to the land treatment unit’s baseline fertilizer treatment (FERT, ‘F’) to measure if they improved the remediation efficiency of an engine oil-contaminated soil (7500 ± 100 mg kg-1). Results indicate that MANR-F was the only amendment more effective than FERT for PHC reduction, while emitting the least CO2overall. RCW-F was equivalent to FERT but retained more moisture. Although BSG contributed the most nitrogen to the soil, BSG-F retained excessive moisture, emitted more VOCs, contained less soil O2, and was less effective than the baseline treatment. Significantly more of the C16-C22fraction was removed (63 ± 22%) than all other fractions (C22-C28, C28-C34, C34-C40), which were equally removed. Microbial community-level physiological profiling (CLPP) was conducted with Biolog EcoplatesTM, and catabolic diversity differed between treatments (utilization rates of 31 carbon sources). MANR-F has the potential to increase PHC-remediation speed and efficiency compared to inorganic fertilizer alone. Other RFM promote moisture retention and diverse microbial catabolic activity. A variety of RFM are present across the globe and some can offer low-cost amendments to boost remediation efficiency, while reducing treatment time compared to traditional fertilizer-only methods.

Comparative Transcriptome Analysis Reveals the Mechanism Underlying 3,5-Dibromo-4-Hydroxybenzoate Catabolism via a New Oxidative Decarboxylation Pathway

ABSTRACTThe compound 3,5-dibromo-4-hydroxybenzoate (DBHB) is both anthropogenically released into and naturally produced in the environment, and its environmental fate is of great concern. Aerobic and anaerobic reductive dehalogenations are the only two reported pathways for DBHB catabolism. In this study, a new oxidative decarboxylation pathway for DBHB catabolism was identified in a DBHB-utilizing strain,Pigmentiphagasp. strain H8. The genetic determinants underlying this pathway were elucidated based on comparative transcriptome analysis and subsequent experimental validation. A gene cluster comprisingorf420toorf426, with transcripts that were about 33- to 4,400-fold upregulated in DBHB-induced cells compared with those in uninduced cells, was suspected to be involved in DBHB catabolism. The geneodcA(orf420), which is essential for the initial catabolism of DBHB, encodes a novel NAD(P)H-dependent flavin monooxygenase that mediates the oxidative decarboxylation of DBHB to 2,6-dibromohydroquinone (2,6-DBHQ). The substrate specificity of the purified OdcA indicated that the 4-hydroxyl group and itsortho-halogen(s) are important for hydroxylation of the C-1 site carboxyl group by OdcA. 2,6-DBHQ is then ring cleaved by the dioxygenase OdcB (Orf425) to 2-bromomaleylacetate, which is finally transformed to β-ketoadipate by the maleylacetate reductase OdcC (Orf426). These results provide a better understanding of the molecular mechanism underlying the catabolic diversity of halogenatedpara-hydroxybenzoates.IMPORTANCEHalogenated hydroxybenzoates (HBs), which are widely used synthetic precursors for chemical products and common metabolic intermediates from halogenated aromatics, exert considerable adverse effects on human health and ecological security. Microbial catabolism plays key roles in the dissipation of halogenated HBs in the environment. In this study, the discovery of a new catabolic pathway for 3,5-dibromo-4-hydroxybenzoate (DBHB) and clarification of the genetic determinants underlying the pathway broaden our knowledge of the catabolic diversity of halogenated HBs in microorganisms. Furthermore, the NAD(P)H-dependent flavin monooxygenase OdcA identified inPigmentiphagasp. strain H8 represents a novel 1-monooxygenase for halogenatedpara-HBs found in prokaryotes and enhances our knowledge of the decarboxylative hydroxylation of (halogenated)para-HBs.

Soil microbial functionality in response to the inclusion of cover crop mixtures in agricultural systems

Agricultural systems where monoculture prevails are characterized by fertility losses and reduced contribution to ecosystem services. Including cover crops (CC) as part of an agricultural system is a promising choice in sustainable intensification of those demanding systems. We evaluated soil microbial functionality in cash crops in response to the inclusion of CC by analyzing soil microbial functions at two different periods of the agricultural year (cash crop harvest and CC desiccation) during 2013 and 2014. Three plant species were used as CC: oat (Avena sativa L.), vetch (Vicia sativa L.) and radish (Raphanus sativus L.) which were sown in two different mixtures of species: oat and radish mix (CC1) and oat, radish and vetch mix (CC2), with soybean monoculture and soybean/corn being the cash crops. The study of community level physiological profiles showed statistical differences in respiration of specific C sources indicating an improvement of catabolic diversity in CC treatments. Soil enzyme activities were also increased with the inclusion of CC mixtures, with values of dehydrogenase activity and fluorescein diacetate hydrolysis up to 38.1% and 35.3% higher than those of the control treatment, respectively. This research evidenced that CC inclusion promotes soil biological quality through a contribution of soil organic carbon, improving the sustainability of agrosystems. The use of a CC mixture of three plant species including the legume vetch increased soil biological processes and catabolic diversity, with no adverse effects on cash crop grain yield.