The influence of internal brain state on behavioral performance is well illustrated by the gap-saccade task, in which saccades might be initiated with short latency (express saccade) or with long latency (regular saccade) even though the external visual condition is identical. Accumulated evidence has demonstrated that the internal brain state is different before the initiation of an express saccade than of a regular saccade. However, the reported origin of the fluctuation of internal brain state is disputed among previous studies, e.g., the fixation disengagement theory versus the oculomotor preparation theory. In the present study, we examined these two theories by analyzing the rate and direction of fixational saccades, i.e., small amplitude saccades during fixation period, because they could be modulated by internal brain state. Since fixation disengagement is not spatially tuned, it might affect the rate but not direction of fixational saccade. In contrast, oculomotor preparation can contain the spatial information for upcoming saccade, thus, it might have a distinct effect on fixational saccade direction. We found that the different spatiotemporal characteristics of fixational saccades among tasks with different gap durations reveals different driven force to change the internal brain state. Under short gap duration (100 ms), fixation disengagement plays a primary role in switching internal brain state. Conversely, under medium (200 ms) and long (400 ms) gap durations, oculomotor preparation plays a primary role. These results suggest that both fixation disengagement and oculomotor preparation can change the internal brain state, but their relative contributions are gap-duration dependent.