Modelling the probability of capture for New Zealand's longfin eels ('Anguilla dieffenbachii') and shortfin eels ('Anguilla australis')

<p>Longfin eel and shortfin eel probability of capture models can be used to build probability of capture maps. These maps can help identify eel encounter hotspots in New Zealand and are useful for managing and conserving the species. This research models longfin eel and shortfin eel presence/absence data using regularized random forest (RRF) models, vectorautoregressive spatial-temporal (VAST) models and Bayesian Gaussian random field (GRaF) models. Probability of capture maps built under VAST and GRaF remain approximately consistent with the maps built under RRF models. That is, longfin eels have high probabilities of capture around the coast of New Zealand’s North Island and have low probabilities of capture throughout the centre of New Zealand’s South Island. Shortfin eels have high probabilities of capture in small isolated regions of New Zealand’s North Island and have very low probabilities of capture throughout most of New Zealand’s South Island. Cross validation and spatial cross validation was used to compare the models. Cross validation results show that, compared to RRF models, VAST models improve predictive accuracy for the longfin eel and shortfin eel. Whereas, GRaF only improves predictive performance for the longfin eel. However, spatial cross validation shows no significant difference between VAST and RRF models. Hence, VAST models have higher predictive accuracy than RRF models for the longfin eel and shortfin eel when the training set is spatially correlated to the test set.</p>

Modelling the probability of capture for New Zealand's longfin eels ('Anguilla dieffenbachii') and shortfin eels ('Anguilla australis')

<p>Longfin eel and shortfin eel probability of capture models can be used to build probability of capture maps. These maps can help identify eel encounter hotspots in New Zealand and are useful for managing and conserving the species. This research models longfin eel and shortfin eel presence/absence data using regularized random forest (RRF) models, vectorautoregressive spatial-temporal (VAST) models and Bayesian Gaussian random field (GRaF) models. Probability of capture maps built under VAST and GRaF remain approximately consistent with the maps built under RRF models. That is, longfin eels have high probabilities of capture around the coast of New Zealand’s North Island and have low probabilities of capture throughout the centre of New Zealand’s South Island. Shortfin eels have high probabilities of capture in small isolated regions of New Zealand’s North Island and have very low probabilities of capture throughout most of New Zealand’s South Island. Cross validation and spatial cross validation was used to compare the models. Cross validation results show that, compared to RRF models, VAST models improve predictive accuracy for the longfin eel and shortfin eel. Whereas, GRaF only improves predictive performance for the longfin eel. However, spatial cross validation shows no significant difference between VAST and RRF models. Hence, VAST models have higher predictive accuracy than RRF models for the longfin eel and shortfin eel when the training set is spatially correlated to the test set.</p>

First tracking of the oceanic spawning migrations of Australasian short-finned eels (Anguilla australis)

Anguillid eel populations have declined dramatically over the last 50 years in many regions of the world, and numerous species are now under threat. A critical life-history phase is migration from freshwater to distant oceans, culminating in a single life-time spawning event. For many anguillids, especially those in the southern hemisphere, mystery still shrouds their oceanic spawning migrations. We investigated the oceanic spawning migrations of the Australasian short-finned eel (Anguilla australis) using pop-up satellite archival tags. Eels were collected from river estuaries (38° S, 142° E) in south-eastern temperate Australia. In 2019, 16 eels were tracked for up to about 5 months, ~ 2620 km from release, and as far north as the tropical Coral Sea (22° S, 155° E) off the north-east coast of Australia. Eels from southern Australia appeared to access deep water off the Australian coast via two main routes: (i) directly east via Bass Strait, or (ii) south-east around Tasmania, which is the shortest route to deep water. Tagged eels exhibited strong diel vertical migrations, alternating between the warm euphotic zone (~ 100–300 m, 15–20 °C) at night and the mesopelagic zone (~ 700–900 m, 6–8 °C) during the day. Marine predators, probably lamnid sharks, tuna, or marine mammals, ended many eel migrations (at least ~ 30%), largely before the eels had left the Australian continental shelf. The long and risky marine migrations of Australasian eels highlight the need for better information on the processes contributing to eel mortality throughout the life cycle, including the impacts of future changes to oceanic currents, predator abundance and direct anthropogenic disturbances.

Aspects of the Biology of Juvenile Freshwater Eels (Anguillidae) in New Zealand

<p>The early freshwater life of the two species of New Zealand freshwater eels, Anguilla australis schmidtii Phillipps and A. dieffenbachii Gray was studied involving an examination of 8131 glass-eels, 5275 migratory elvers, and 4291 resident eels of less than 26 cm. Most eels were collected from the Makara Stream, Wellington by set-net, hand-net and electric fishing. These extensive samples together with subsidiary collections from elsewhere in New Zealand show that glass-eels of both species arrive in fresh-water from July to December. Their otoliths indicate a marine larval life of about 18 months but it is not possible as yet to locate the precise oceanic spawning areas. Migratory movements of glass-eels are in two phases: an invasion of fresh-water from the sea and an upstream migration. The former occurs only at night with a periodicity corresponding to the daily ebb-flood tidal rhythms. There is a seasonal reversal in this response which is attributable to the onset of the behavioural transition taking place prior to the second migratory phase. Increased pigmentation and changes in response to light, flowing fresh-water and schooling tendencies characterise this latter migration which occurs primarily at spring tide periods. Such juvenile eels show specific habitat preferences and a high degree of olfactory differentiation of water types. This behaviour, together with pigment development and physical tolerances, was studied in the laboratory. Measurements of invading glass-eels show that mean length, weight and condition all decline throughout the season of arrival but mean vertebral numbers remain constant. An upstream migration of small eels (elvers) occurs each summer and is readily observed at many hydro-electric stations. These migrations, comprising eels of mixed sizes and age groups, penetrate progressively further upstream each year. In both species, scales begin formation at body lengths of 16.5-20 cm. All features of scale formation, including the number of scale rings, are related to length with relative differences in rate of development occurring between the species. In contrast to scale rings, otolith rings are annual in formation and become visible after grinding or burning the otolith. Growth rates established for 273 eels to 29 cm in length from the Makara Stream, Wellington, are slow, with mean annual increments of 2.2 and 2.1 cm respectively for shortfins and longfins. In contrast, shortfins from a coastal lake near Wellington reach 26 cm in their third year of freshwater life. Length-weight relationships for small eels are given together with mean monthly condition factors. Growth studies on elvers held in a multiple tank unit in which temperature, density, and amount and frequency of feeding could be controlled, show that young eels grow more slowly than normal under such conditions. However, growth appears optimum at 20 degrees C with a feeding rate of 5-7% body weight per day. Feeding efficiency decreases with higher temperatures. At both glass-eel and elver stages, shortfins adapt and survive better under artificial conditions.</p>

Aspects of the Biology of Juvenile Freshwater Eels (Anguillidae) in New Zealand

<p>The early freshwater life of the two species of New Zealand freshwater eels, Anguilla australis schmidtii Phillipps and A. dieffenbachii Gray was studied involving an examination of 8131 glass-eels, 5275 migratory elvers, and 4291 resident eels of less than 26 cm. Most eels were collected from the Makara Stream, Wellington by set-net, hand-net and electric fishing. These extensive samples together with subsidiary collections from elsewhere in New Zealand show that glass-eels of both species arrive in fresh-water from July to December. Their otoliths indicate a marine larval life of about 18 months but it is not possible as yet to locate the precise oceanic spawning areas. Migratory movements of glass-eels are in two phases: an invasion of fresh-water from the sea and an upstream migration. The former occurs only at night with a periodicity corresponding to the daily ebb-flood tidal rhythms. There is a seasonal reversal in this response which is attributable to the onset of the behavioural transition taking place prior to the second migratory phase. Increased pigmentation and changes in response to light, flowing fresh-water and schooling tendencies characterise this latter migration which occurs primarily at spring tide periods. Such juvenile eels show specific habitat preferences and a high degree of olfactory differentiation of water types. This behaviour, together with pigment development and physical tolerances, was studied in the laboratory. Measurements of invading glass-eels show that mean length, weight and condition all decline throughout the season of arrival but mean vertebral numbers remain constant. An upstream migration of small eels (elvers) occurs each summer and is readily observed at many hydro-electric stations. These migrations, comprising eels of mixed sizes and age groups, penetrate progressively further upstream each year. In both species, scales begin formation at body lengths of 16.5-20 cm. All features of scale formation, including the number of scale rings, are related to length with relative differences in rate of development occurring between the species. In contrast to scale rings, otolith rings are annual in formation and become visible after grinding or burning the otolith. Growth rates established for 273 eels to 29 cm in length from the Makara Stream, Wellington, are slow, with mean annual increments of 2.2 and 2.1 cm respectively for shortfins and longfins. In contrast, shortfins from a coastal lake near Wellington reach 26 cm in their third year of freshwater life. Length-weight relationships for small eels are given together with mean monthly condition factors. Growth studies on elvers held in a multiple tank unit in which temperature, density, and amount and frequency of feeding could be controlled, show that young eels grow more slowly than normal under such conditions. However, growth appears optimum at 20 degrees C with a feeding rate of 5-7% body weight per day. Feeding efficiency decreases with higher temperatures. At both glass-eel and elver stages, shortfins adapt and survive better under artificial conditions.</p>

Studies on the Reproductive Biology of New Zealand Freshwater Eels

<p>Macroscopic and histological observations of the gonads from 1,739 non-migrant freshwater eels, the shortfin Anguilla australis schmidtii Phillipps and the longfin A. dieffenbachii Gray, showed that they pass through seven stages of development. Shortfins become sexually differentiated at body lengths of 35.0cm to 56.9cm and longfins at lengths of 50.0cm to 67.0cm. No intersexual stage was present, as in A. anguilla L., and although 1% of 350 migrating longfin males examined contained ribbon-like testes, the typical lobed organ of Syrski (testis) can be used as diagnostic of maleness. Histologically, the maximum stage of development attained in the non-migrant, immature stage, was spermatogonia in the males and vacuolated oocytes in females. At the time of seaward migration, based on gonad histology, gonadosomatic indices and ova diameters, migrating longfins were more sexually developed than shortfins. These differences may relate to the location of different oceanic spawning areas: that for the longfin possibly being closer to New Zealand. The autumnal migratory runs, from March to May, of the sexually maturing adults in the Makara stream showed no particular species or sex sequence. The movement of eels was coincident with a rise in stream level and the second half of the lunar cycle. Other relevant environmental factors are discussed. In Lake 0noke peak catches of seaward migrating shortfins were made before the longfins and movements of eels occurred throughout the lunar cycle. Once at sea, the eels apparently disappear. A published note is included on the first eel of the New Zealand species, a longfin female, to be caught at sea. Age determinations from 995 eels were made by otoliths, which were burnt lightly to intensify the growth zones for reading purposes. Shortfin males are younger than females at migration. Longfins are older than shortfins at migration but the males are younger than the females. In the non-migrant stage, sexually undifferentiated shortfins grow more slowly relative to the males, and males relatively more slowly than the females. Similar but less significant differences in growth occur in longfins. Migrant males held in seawater were induced to mature and spawn with injections of mammalian hormones or carp pituitaries, over temperatures of 11.8 degrees C to 28 degrees C. The maturation period was dependent on temperature. Testes of experimental eels that survived maturation regressed to the pre-migrant or migrant stage. Two eels that had regressed were induced to mature a second time. Females held at 20 degrees C and injected with mammalian hormones showed significant increases in sexual development but died before maturity. Females injected with carp pituitaries matured and spawned. Mature longfin eggs, 0.9mm to 1.2mm in diametar, and mature shortfin eggs, 0.9mm to 1.2mm in diameter, are translucent and contain one to many oil globules. A blastodisc formed in water hardened eggs but attempts at fertilization were unsuccessful. Gametogenesis, observed from non-migrant, migrant and hormone injected eels is similar to that described for other teleosts. Electron microscope observations showed parallel features of spermiogenesis in both species. Mature spermatozoa have crescent shaped heads with an anteriorly placed mitochondrion. A flagellum of the unusual 9 + 0 pattern arises from the posterior region of the head, and a short, striated rod-like structure is positioned adjacent to the main flagellum. A complex of subfibrils which extend along either side of the head to the mitochondrion arise from the proximal centriole.</p>

Studies on the Reproductive Biology of New Zealand Freshwater Eels

<p>Macroscopic and histological observations of the gonads from 1,739 non-migrant freshwater eels, the shortfin Anguilla australis schmidtii Phillipps and the longfin A. dieffenbachii Gray, showed that they pass through seven stages of development. Shortfins become sexually differentiated at body lengths of 35.0cm to 56.9cm and longfins at lengths of 50.0cm to 67.0cm. No intersexual stage was present, as in A. anguilla L., and although 1% of 350 migrating longfin males examined contained ribbon-like testes, the typical lobed organ of Syrski (testis) can be used as diagnostic of maleness. Histologically, the maximum stage of development attained in the non-migrant, immature stage, was spermatogonia in the males and vacuolated oocytes in females. At the time of seaward migration, based on gonad histology, gonadosomatic indices and ova diameters, migrating longfins were more sexually developed than shortfins. These differences may relate to the location of different oceanic spawning areas: that for the longfin possibly being closer to New Zealand. The autumnal migratory runs, from March to May, of the sexually maturing adults in the Makara stream showed no particular species or sex sequence. The movement of eels was coincident with a rise in stream level and the second half of the lunar cycle. Other relevant environmental factors are discussed. In Lake 0noke peak catches of seaward migrating shortfins were made before the longfins and movements of eels occurred throughout the lunar cycle. Once at sea, the eels apparently disappear. A published note is included on the first eel of the New Zealand species, a longfin female, to be caught at sea. Age determinations from 995 eels were made by otoliths, which were burnt lightly to intensify the growth zones for reading purposes. Shortfin males are younger than females at migration. Longfins are older than shortfins at migration but the males are younger than the females. In the non-migrant stage, sexually undifferentiated shortfins grow more slowly relative to the males, and males relatively more slowly than the females. Similar but less significant differences in growth occur in longfins. Migrant males held in seawater were induced to mature and spawn with injections of mammalian hormones or carp pituitaries, over temperatures of 11.8 degrees C to 28 degrees C. The maturation period was dependent on temperature. Testes of experimental eels that survived maturation regressed to the pre-migrant or migrant stage. Two eels that had regressed were induced to mature a second time. Females held at 20 degrees C and injected with mammalian hormones showed significant increases in sexual development but died before maturity. Females injected with carp pituitaries matured and spawned. Mature longfin eggs, 0.9mm to 1.2mm in diametar, and mature shortfin eggs, 0.9mm to 1.2mm in diameter, are translucent and contain one to many oil globules. A blastodisc formed in water hardened eggs but attempts at fertilization were unsuccessful. Gametogenesis, observed from non-migrant, migrant and hormone injected eels is similar to that described for other teleosts. Electron microscope observations showed parallel features of spermiogenesis in both species. Mature spermatozoa have crescent shaped heads with an anteriorly placed mitochondrion. A flagellum of the unusual 9 + 0 pattern arises from the posterior region of the head, and a short, striated rod-like structure is positioned adjacent to the main flagellum. A complex of subfibrils which extend along either side of the head to the mitochondrion arise from the proximal centriole.</p>

Development of droplet digital Polymerase Chain Reaction assays for the detection of long-finned (Anguilla dieffenbachii) and short-finned (Anguilla australis) eels in environmental samples

Freshwater eels are ecologically, and culturally important worldwide. The New Zealand long-finned eel (Anguilla dieffenbachii) and short-finned eel (Anguilla australis) are apex predators, playing an important role in ecosystem functioning of rivers and lakes. Recently, there has been a national decline in their populations due to habitat destruction and commercial harvest. The emergence of targeted environmental DNA detection methodologies provides an opportunity to enhance information about their past and present distributions. In this study we successfully developed species-specific droplet digital Polymerase Chain Reaction (ddPCR) assays to detect A. dieffenbachii and A. australis DNA in water and sediment samples. Assays utilized primers and probes designed for regions of the mitochondrial cytochrome b and 16S ribosomal RNA genes in A. dieffenbachii and A. australis, respectively. River water samples (n = 27) were analyzed using metabarcoding of fish taxa and were compared with the ddPCR assays. The presence of A. dieffenbachii and A. australis DNA was detected in a greater number of water samples using ddPCR in comparison to metabarcoding. There was a strong and positive correlation between gene copies (ddPCR analyses) and relative eel sequence reads (metabarcoding analyses) when compared to eel biomass. These ddPCR assays provide a new method for assessing spatial distributions of A. dieffenbachii and A. australis in a range of environments and sample types.

First Tracking of the Oceanic Spawning Migrations of Australasian Short- Finned Eels (Anguilla Australis)

Across their near-global range, anguillid eel populations have declined dramatically over the last fifty years and many species are now threatened. A critical life history phase is migration from freshwater to distant oceans, culminating in their single life-time spawning event. For many anguillids, especially those in the southern hemisphere, mystery still shrouds their oceanic spawning migrations. We investigated the oceanic spawning migrations of the Australasian short-finned eel (Anguilla australis) using pop-up satellite archival tags. Eels were collected from river estuaries (38°S, 142°E) in south-eastern temperate Australia. In 2019, sixteen eels were tracked for up to about 5 months, ~2620 km from release, and as far north as the tropical Coral Sea (22°S, 155°E) off the north-east coast of Australia. Eels from southern Australia appeared to access deep water off the Australian coast via two main routes: (i) directly east via Bass Strait, or (ii) south-east around Tasmania, which is the shortest route to deep water. Tagged eels exhibited strong diel vertical migrations, alternating between the warm euphotic zone (~100 to 300 m, 15 to 20°C) at night, and the mesopelagic zone (~700 m to 900 m, 6 to 8°C) during the day. Marine predators, probably lamnid sharks, tuna, or marine mammals, ended many eel migrations (at least ~30%), with many eels lost before leaving the Australian continental shelf. The long and risky marine migrations of Australasian eels highlight the need for better information on the processes contributing to eel mortality across the life cycle, including the impacts of future changes to oceanic currents, predator abundance and direct anthropogenic disturbances.