A new analytical method, using the dark Fenton reaction as an OH radical source to study oxidations of unsaturated (di)aldehydes in the aqueous phase

<p>Anthropogenic and biogenic sources produce numerous primary emitted gases, organic compounds, and aerosols in the atmosphere. An important group of such compounds are α, β-unsaturated carbonyl molecules, which can be formed in the atmosphere due to their secondary origin, including oxidation of their precursors such as hydrocarbons with common atmospheric oxidants such as hydroxyl radicals (‧OH). Since those compounds contain at least one double bond and one carbonyl group, they are characterized as water-soluble molecules, which can diffuse on the cloud droplets’ surface and undergo a phase transfer from the gas phase to the atmospheric aqueous phase. In the latter, the oxidized organic compounds can contribute to aerosol mass production through in-cloud processes, yielding aqueous phase secondary organic aerosols (aqSOA). Due to their strong photochemical behavior, the development of a new analytical approach for evaluating the OH radical kinetics in the aqueous phase under dark conditions was essential. One of the most studied non-photolytic reactions is Fenton chemistry (Fe(II)/H<sub>2</sub>O<sub>2</sub>), which serves as an OH radical source in the dark in the atmospheric aqueous phase after catalytic decomposition of H<sub>2</sub>O<sub>2</sub> in the presence of Fe(II) at acidic pH values. In a typical experiment, temperature-dependent second-order rate constants of OH radicals with unsaturated dialdehydes, such as (1) crotonaldehyde, and (2) 1,4-butenedial, were determined in a bulk reactor by using the competition kinetics method. In the newly developed method, the role of radical scavenger was performed by isotopically labeled 2-propanol (d8), while the OH-initiated oxidation produces deuterated acetone (d6), being analyzed with GC-MS after derivatization. The findings from our research will be incorporated in the CAPRAM model to explain discrepancies between experimentally observed and predicted aqSOA properties.</p>

Fe-catalyzed sulfide oxidation in hydrothermal plumes is a source of reactive oxygen species to the ocean

Historically, the production of reactive oxygen species (ROS) in the ocean has been attributed to photochemical and biochemical reactions. However, hydrothermal vents emit globally significant inventories of reduced Fe and S species that should react rapidly with oxygen in bottom water and serve as a heretofore unmeasured source of ROS. Here, we show that the Fe-catalyzed oxidation of reduced sulfur species in hydrothermal vent plumes in the deep oceans supported the abiotic formation of ROS at concentrations 20 to 100 times higher than the average for photoproduced ROS in surface waters. ROS (measured as hydrogen peroxide) were determined in hydrothermal plumes and seeps during a series of Alvin dives at the North East Pacific Rise. Hydrogen peroxide inventories in emerging plumes were maintained at levels proportional to the oxygen introduced by mixing with bottom water. Fenton chemistry predicts the production of hydroxyl radical under plume conditions through the reaction of hydrogen peroxide with the abundant reduced Fe in hydrothermal plumes. A model of the hydroxyl radical fate under plume conditions supports the role of plume ROS in the alteration of refractory organic molecules in seawater. The ocean’s volume circulates through hydrothermal plumes on timescales similar to the age of refractory dissolved organic carbon. Thus, plume-generated ROS can initiate reactions that may affect global ocean carbon inventories.

Fenton-Chemistry-Based Oxidative Modification of Proteins Reflects Their Conformation

In order to understand protein structure to a sufficient extent for, e.g., drug discovery, no single technique can provide satisfactory information on both the lowest-energy conformation and on dynamic changes over time (the ‘four-dimensional’ protein structure). Instead, a combination of complementary techniques is required. Mass spectrometry methods have shown promise in addressing protein dynamics, but often rely on the use of high-end commercial or custom instruments. Here, we apply well-established chemistry to conformation-sensitive oxidative protein labelling on a timescale of a few seconds, followed by analysis through a routine protein analysis workflow. For a set of model proteins, we show that site selectivity of labelling can indeed be rationalised in terms of known structural information, and that conformational changes induced by ligand binding are reflected in the modification pattern. In addition to conventional bottom-up analysis, further insights are obtained from intact mass measurement and native mass spectrometry. We believe that this method will provide a valuable and robust addition to the ‘toolbox’ of mass spectrometry researchers studying higher-order protein structure.

Copper, Iron, Selenium and Lipo-Glycemic Dysmetabolism in Alzheimer’s Disease

The aim of the present review is to discuss traditional hypotheses on the etiopathogenesis of Alzheimer’s disease (AD), as well as the role of metabolic-syndrome-related mechanisms in AD development with a special focus on advanced glycation end-products (AGEs) and their role in metal-induced neurodegeneration in AD. Persistent hyperglycemia along with oxidative stress results in increased protein glycation and formation of AGEs. The latter were shown to possess a wide spectrum of neurotoxic effects including increased Aβ generation and aggregation. In addition, AGE binding to receptor for AGE (RAGE) induces a variety of pathways contributing to neuroinflammation. The existing data also demonstrate that AGE toxicity seems to mediate the involvement of copper (Cu) and potentially other metals in AD pathogenesis. Specifically, Cu promotes AGE formation, AGE-Aβ cross-linking and up-regulation of RAGE expression. Moreover, Aβ glycation was shown to increase prooxidant effects of Cu through Fenton chemistry. Given the role of AGE and RAGE, as well as metal toxicity in AD pathogenesis, it is proposed that metal chelation and/or incretins may slow down oxidative damage. In addition, selenium (Se) compounds seem to attenuate the intracellular toxicity of the deranged tau and Aβ, as well as inhibiting AGE accumulation and metal-induced neurotoxicity.