Certain Environmental Conditions Maximize Ammonium Accumulation and Minimize Nitrogen Loss During Nitrate Reduction Process by Pseudomonas putida Y-9

Realizing the smallest nitrogen loss is a challenge in the nitrate reduction process. Dissimilatory nitrate reduction to ammonium (DNRA) and nitrate assimilation play crucial roles in nitrogen retention. In this study, the effects of the carbon source, C/N ratio, pH, and dissolved oxygen on the multiple nitrate reduction pathways conducted by Pseudomonas putida Y-9 are explored. Strain Y-9 efficiently removed nitrate (up to 89.79%) with glucose as the sole carbon source, and the nitrogen loss in this system was 15.43%. The total nitrogen decrease and ammonium accumulation at a C/N ratio of 9 were lower than that at 12 and higher than that at 15, respectively (P < 0.05). Besides, neutral and alkaline conditions (pH 7–9) favored nitrate reduction. Largest nitrate removal (81.78%) and minimum nitrogen loss (10.63%) were observed at pH 7. The nitrate removal and ammonium production efficiencies of strain Y-9 increased due to an increased shaking speed. The expression patterns of nirBD (the gene that controls nitrate assimilation and DNRA) in strain Y-9 were similar to ammonium patterns of the tested incubation conditions. In summary, the following conditions facilitated nitrate assimilation and DNRA by strain Y-9, while reducing the denitrification: glucose as the carbon source, a C/N ratio of 9, a pH of 7, and a shaking speed of 150 rpm. Under these conditions, nitrate removal was substantial, and nitrogen loss from the system was minimal.

Potential Nitrate Reduction Rates in Marine Mangrove Sediments in the Lesser Antilles

Mangrove sediments are generally nitrogen limited, with nitrate reduction to ammonium instead of denitrification in these sediments, resulting in nitrogen retention rather than nitrogen elimination. The goal of this work was to investigate the potential for nitrate reduction in marine mangrove sediments along a canal impacted by anthropogenic activity (Guadeloupe, West Indies) as a function of increased nitrogen load and how this would change nitrate transformation rates. In addition to that, the impact of the organic carbon load and the hydraulic retention time was assessed as factors affecting nitrate reduction rates. Potential nitrate reduction rates in the sediments along the canal, in the presence of indigenous organic carbon, ranged from 126 to 379 nmol cm‑3 h-1 generally increasing upon increasing supplied nitrate. The potential for nitrate reduction increased significantly with the addition of mangrove leaves, whereas the addition of simple, easily degradable carbon (acetate), resulted in an almost five-fold increase in nitrate reduction rates. The hydraulic retention time also had an impact on the nitrate reducing capacity due to an increased contact time between nitrate and the benthic microbial community. Marine mangrove sediments have a high potential to mitigate nitrogen pollution, mainly governed by the presence of large amounts of degradable carbon in the form of litter. The hydraulic retention time as tested experimentally that can be extrapolated to the time of inundation of the mangrove sediments may increase the potential for nitrate reduction. Whereas the sediments are daily exposed to a small tidal effect, increased water retention could increase the nitrogen elimination potential in these mangrove sediments.

The Impact of Genotype and Age on Energy and Protein Utilization in Individually Housed Brown Laying Hens

Responses to dietary energy and protein levels were compared between two egg-laying genotypes. Individually housed hens of a historic strain (HS) and a modern strain (MS) were compared. In Experiment 1 (Exp.1), four levels of true metabolizable energy, corrected for zero nitrogen retention (TMEn) and four levels of total lysine, were offered from 30 to 40 weeks of age. In Experiment 2 (Exp.2), three levels of apparent metabolizable energy, corrected for zero nitrogen retention (AMEn) and four levels of standardized ileal digestible lysine (SID Lys), were fed from 20 to 30 weeks of age. A randomized factorial block design (4 × 4 Exp.1 and 3 × 4 Exp.2) was applied. Energy utilization for egg output (EO) did not differ (NS), and both strains maintained a constant kJ intake (NS). The efficiency of SID Lys utilization for EO differed, with the MS being the more efficient (p < 0.034). A single model could be used to predict feed intake, using BW, EO, AMEn and SID Lys (r = 0.716). In conclusion, it is unlikely that the requirements of modern layer strains have increased. However, feeding programs should be adjusted for economic reasons and are dependent upon achievable feed intake under particular circumstances.

Nature's nitrite-to-ammonia expressway, with no stop at dinitrogen

Since the characterization of cytochrome c552 as a multiheme nitrite reductase, research on this enzyme has gained major interest. Today, it is known as pentaheme cytochrome c nitrite reductase (NrfA). Part of the NH4+ produced from NO2− is released as NH3 leading to nitrogen loss, similar to denitrification which generates NO, N2O, and N2. NH4+ can also be used for assimilatory purposes, thus NrfA contributes to nitrogen retention. It catalyses the six-electron reduction of NO2− to NH4+, hosting four His/His ligated c-type hemes for electron transfer and one structurally differentiated active site heme. Catalysis occurs at the distal side of a Fe(III) heme c proximally coordinated by lysine of a unique CXXCK motif (Sulfurospirillum deleyianum, Wolinella succinogenes) or, presumably, by the canonical histidine in Campylobacter jejeuni. Replacement of Lys by His in NrfA of W. succinogenes led to a significant loss of enzyme activity. NrfA forms homodimers as shown by high resolution X-ray crystallography, and there exist at least two distinct electron transfer systems to the enzyme. In γ-proteobacteria (Escherichia coli) NrfA is linked to the menaquinol pool in the cytoplasmic membrane through a pentaheme electron carrier (NrfB), in δ- and ε-proteobacteria (S. deleyianum, W. succinogenes), the NrfA dimer interacts with a tetraheme cytochrome c (NrfH). Both form a membrane-associated respiratory complex on the extracellular side of the cytoplasmic membrane to optimize electron transfer efficiency. This minireview traces important steps in understanding the nature of pentaheme cytochrome c nitrite reductases, and discusses their structural and functional features. Graphical abstract

Environmental Implications of Municipal Dump Site on Soil Nitrogen in Calabar Metropolis, Nigeria

Organic matter exhibit strong variations in nitrogen retention and transformation cycle in soil. However, nitrogen could be altered by seasonal variations, leading us to hypothesize that the open municipal waste dump site in Calabar exposed to dry and wet season could alter nitrogen dynamics in that soil. A total of sixty (60) composite soil samples were collected at different landscape positions (summit crest, shoulder slope, toe slope, interfluve slope, valley floor) of a municipal dump site and a control (no refuse area) during the dry and wet seasons in Calabar and analyzed to ascertain the effects on forms and status of soil nitrogen. The soils were loamy sand across the study location with pH values of 4.50, 7.00, 6.70, 7.30, 5.00, 7.30 (dry season) and 5.00. 7.30, 7.00, 7.40, 5.90, 7.40 (wet season) for the control, summit crest, shoulder slope, toe slope, interfluve slope and valley floor accordingly. Values obtained for total nitrogen (N) from the study site were generally low (<0.21 %), with values for dry season slightly higher than the wet season. NH4+ recorded higher content in wet than in dry season with values ranging between 12.11-14.11 mg/kg (control), 14.60 - 15.90 mg/kg (Summit crest); 18.25 - 20.05 mg/kg (Shoulder slope), 18.30 - 20.20 mg/kg (Toe slope), 12.30 - 14.00 mg/kg (Interfluve slope) and 9.24 -11.07 mg/kg (Valley floor). The Shoulder and toe slopes recorded the highest NH4+ concentration in the wet season. N02- contents documented for the control site were within the ranges of 2.78- 3.20 and 3.22-3.62 mg/kg while the dumpsite had values between 2.49-3.45 and 2.98 -3.22 mg/kg was observed for the shoulder position, the toe slope contained between 2.30-2.75 and 2.70 -2.82 mg/kg, the inter fluve slope had similar ranges of 2.32-2.90 and 2.70-3.08 mg/kg, and the valley floor 2.45-2.60 and 2.78-2.98 mg/kg. N02- values were higher for the wet than dry season. NO3- nitrogen was observed to be excessive across the dumpsite with the highest values > 80 mg/kg obtained at the valley floor. The NO3- values were higher in dry season across the all the landscape positions than in the wet season. The values were equally higher for the dumpsite than the control. It was observed that the dumpsite soils contend excessive NO3- which could be converted to nitrous oxide (N2O) thus contributing to green house (GHG) emissions. It was also noted that seasonal variation did not significantly affect the N content at the different landscape positions of the municipal dumpsite in Calabar. It is highly recommended that municipal waste be sorted and the organic materials composted to harness the rich NO3- content as observed in this research. Received: 22 September 2021 / Accepted: 25 October 2021 / Published: 5 November 2021

Digestibility and nitrogen and water balance in horses fed rhizoma peanut hay

Rhizoma peanut (RP, Arachis glabrata) hay has the potential to meet horses’ crude protein requirements with less nitrogen excretion than other legumes. This study aimed to evaluate nutrient intake, apparent digestibility, and nitrogen balance of RP ‘Florigraze’ hay compared to alfalfa (ALF, Medicago sativa L. ‘Legendary XHD’) and bermudagrass (BG, Cynodon dactylon L. ‘Coastal’) hays when fed to maintenance horses at 2% BW/d on a dry matter (DM) basis. We hypothesized that nutrient intake would be comparable between the legume hays and lesser for BG, and that RP would result in reduced nitrogen excretion compared to alfalfa. Six mature Quarter Horse geldings (593 ± 40 kg; mean ± SD) were randomly assigned to one of the hays in a replicated 3 x 3 Latin square with 21-d periods. A 14-d adaptation phase was followed by a 3-d total fecal and urine collection. Days 18 to 21 were used for a companion study. Intake of nutrients is reported on a DM basis. Digestible energy (DE) intakes from ALF (29.91 Mcal/d) and RP (29.37 Mcal/d) were greater (P &lt; 0.0001) than BG (20.78 Mcal/d). Crude protein (CP) intake was greater (P &lt; 0.0001) for ALF (2.5 kg/d), followed by RP (1.9 kg/d), and BG (1.5 kg/d). All hays exceeded maintenance requirements for DE, CP, Ca, and P. Apparent digestibility of DM and CP were greatest (P &lt; 0.0001) for ALF (69 and 84%), intermediate for RP (61 and 72%), and least for BG (46 and 64%). Apparent digestibility of neutral detergent fiber did not differ (P = 0.2228) among hays, while digestibility of acid detergent fiber (P = 0.0054) was least for RP but similar for ALF and BG. Water intake (kg/d) for ALF (57) was greater (P=0.0068) than RP (45) and BG (41). Greater (P = 0.0271) water retention (kg/d) was observed for ALF (13.5), followed by RP (10.8) and BG (7.5). There was a difference in nitrogen excretion, with greatest urinary nitrogen excretion for ALF (P &lt; 0.0001) and greatest fecal nitrogen excretion for BG (P = 0.0001). Total nitrogen excretion was greater (P &lt; 0.0001) for ALF (278 g/d), followed by RP (211 g/d), and BG (179 g/d). Nitrogen retention was greater (P = 0.0005) for ALF when represented as g/d (ALF: 129, RP: 86, and BG: 57 g/d), but similar (P = 0.0377) to RP when presented as percent of nitrogen intake (ALF: 32, RP: 29, and BG: 24%). Results indicate that rhizoma peanut hay is a suitable legume for horses by meeting DE and CP requirements and having a significant reduction in nitrogen compared to alfalfa.