Risks to Fish Populations in Dryland Rivers From the Combined Threats of Drought and Instream Barriers

In dryland rivers, flow intermittency means fish populations are often subjected to drought disturbance. The viability of these fish populations depends on the availability of waterhole refuges for individuals to survive drought (resistance) and the ability of surviving fish to repopulate the rivers by recruitment and dispersal once flow returns (resilience). In this study we combined remote-sensed mapping of the locations of waterholes that lasted through an extreme drought in the northern Murray Darling Basin, Australia, with an assessment of the impacts of in-stream barriers on limiting the opportunities for fish to move and repopulate after drought. We found that at the peak of this 2018–2020 drought, the worst on record for some rivers and the most spatially synchronous recorded across the region, waterholes were few and generally small – representing only 11% of the total river channel network. All the fish in the region that survived the drought were concentrated into this limited waterhole refuge habitat. Even small instream structures, such as minor weirs, caused large reductions in the opportunities for fish to move between river segments when there is flow. Almost all the 104 instream structures assessed reduced long-term fish movement opportunities, measured as days with discharge greater than calculated barrier drown out thresholds, by more than 70% and up to 100%, when compared to opportunities for movement if the barrier was not present. This large impact from small instream barriers is a consequence of flow intermittency and is likely to reduce fish population resilience and impact the capacity of fish populations to recover after drought. Combining information on the risks posed by limited refuge habitat availability during drought and from reduced movement opportunity following drought allowed us to identify river segments where these combined threats are the greatest risk to viability of local fish populations. Considering the spatial arrangements of these risks provides a means to systematically prioritize mitigation measures such as weir removal to improve fish movement opportunities and local management of key waterholes to increase drought resistance. The approach used here provides a guide for assessing and prioritizing the management of fish population viability risks from drought and fragmentation by barriers in any non-perennial river setting.

Evaluating a landscape-scale daily water balance model to support spatially continuous representation of flow intermittency throughout stream networks

There is a growing interest globally in the spatial distribution and temporal dynamics of intermittently flowing streams and rivers, and how this varies in relation to climatic and other environmental factors. However, biases in the distribution of stream gauges may give a misleading impression of spatial-temporal variations in streamflow intermittency within river networks. Here, we developed an approach to quantify catchment-wide streamflow intermittency over long time frames and in a spatially explicit manner, using readily accessible and spatially contiguous daily runoff data from a national-scale water balance model. We examined the ability of the water balance model to simulate streamflow in two hydro-climatically distinctive (subtropical and temperate) regions in Australia, with a particular focus on low-flow simulations. We also evaluated the effect of model time step (daily vs. monthly) on flow intermittency estimation to inform future model selection. The water balance model showed better performance in the temperate region characterised by steady baseflow than in the subtropical region with flashy hydrographs and frequent cease-to-flow periods. The model tended to overestimate low-flow magnitude mainly due to overestimation of gains (e.g. groundwater release to baseflow) during low-flow periods. Modelled patterns of flow intermittency revealed highly dynamic behaviour in space and time, with cease-to-flow events affecting between 29 and 80 % of the river network over the period of 1911–2016, using a daily streamflow model. The daily flow model did not perform better than the monthly flow model in quantifying flow intermittency at a monthly time step, and model selection should depend on the intended application of the model outputs. Our general approach to quantifying spatio-temporal patterns of flow intermittency is transferable to other parts of the world, and it can inform hydro-ecological understanding and management of intermittent streams where limited gauging data are available.

Flow intermittency negatively affects three phylogenetically related shredder stoneflies by reducing CPOM availability in recently intermittent Alpine streams in SW-Italian Alps

Several Alpine streams are currently facing recurrent summer drying events with detrimental consequences on stream detritivores, i.e., shredders, due to negative effects via changes the organic matter (CPOM) availability. We examined the ecological requirements of three phylogenetically related shredder genera belonging to the family of Nemouridae (Plecoptera), namely Nemoura, Protonemura and Amphinemura, in 14 Alpine streams recently facing recurrent summer flow intermittency events. We evaluated the overlap among their ecological niches measured in terms of hydraulic stress, substrate composition, changes in CPOM availability and competition with other shredder taxa (i.e., presence of individuals of other shredders) and we examined potential changes in their ecological niches between permanent and intermittent sites. The ecological niches of Protonemura and Amphinemura overlap broadly, but not with Nemoura, suggesting only partial potential competition. The reduced CPOM availability decreased the individual abundance of the three genera in intermittent sites, where they consistently preferred microhabitats with high CPOM availability and low competition with other shredder taxa, possibly due to food limitation. Overall, our results emphasize how the negative effect of flow intermittency on shredders in Alpine streams is mainly due to the decrease in CPOM availability, with consequent potential bottom up effects on stream ecosystem functionality.