KARAKTERISTIK TEPUNG KULIT KENTANG (Solanum tuberosum) SEBAGAI BAHAN PANGAN SUMBER KALIUM

Potato peel flour (Solanum tuberosum) is a flour that has a potential to be developed as a food source of potassium. This research was conducted to determine the chemical properties of potato peel flour. Potato peel flour is carried out in several stages: peeling potatoes; soaking in 0.3% sodium bisulfite (NaHSO3) solution for 60, 90 and 120 minutes; drying; milling; and sifting. Parameters observed were water content, ash content, protein, fat, carbohydrates and potassium (K). Potato peel flour with various immersions produced has the characteristics of water content (7.84 – 9.03%), ash content (4.15 – 4.67%), protein (11.35 – 11.60 %), fat ( 0.74 – 0.87%), carbohydrates (74.63 – 75.26%), and potassium (1231.32 – 1671.86 mg/100 g). Based on the potassium content, potato skin flour with the highest potassium content was soaked for 120 minutes.

Sulfite preservatives effects on the mouth microbiome: changes in viability, diversity and composition of microbiota

Processed foods make up about 70 percent of the American diet. Sulfites and other food preservatives are added to these foods largely to limit bacterial contamination. The mouth microbiota and its associated enzymes are the first to encounter food and therefore likely to be the most affected. Eight saliva samples from ten individuals were exposed to two sulfite preservatives, sodium sulfite and sodium bisulfite. One sample set was evaluated for bacteria composition utilizing 16s rRNA sequencing, and the number of viable cells in all sample sets was determined utilizing ATP assays at 10 and 40-minute exposure times. All untreated samples were analyzed for baseline lysozyme activity, and possible correlations between the number of viable cells and lysozyme activity. Sequencing results indicated significant increases in alpha diversity with sodium bisulfite exposure and changes in relative abundance of 3 amplicon sequence variants (ASV). Sodium sulfite treated samples showed a significant decrease in the Firmicutes/Bacteroidetes ratio, a marginally significant change in alpha diversity, and a significant change in the relative abundance for Proteobacteria, Firmicutes, Bacteroidetes, and for 6 ASVs. Beta diversity did not show any separation between groups, however, all but one sample set was observed to be moving in the same direction under sodium sulfite treatment in a principal component analysis. ATP assays indicated a significant and consistent average decrease in activity ranging from 24 - 46% at both exposure times with both sulfites. Average initial rates of lysozyme activity between all individuals ranged from ± 76% compared to individual variations of 10 - ± 34%. No consistent, significant correlation was found between ATP and lysozyme activity in any sample sets. Conclusions: Sulfite preservatives, at concentrations regarded as safe by the FDA, alter the relative abundance and richness of the microbiota found in saliva, and decrease the number of viable cells, within 10 minutes of exposure.

Improving the Analysis of DNA Sanger Sequencing Results: SeqBase Computer Program

Введение. Программное обеспечение, предоставляемое производителями автоматических генетических анализаторов, в большинстве случаев позволяет провести адекватный анализ результатов секвенирования ДНК по Сэнгеру для матриц с составом нуклеотидов, близким к эквивалентному. Однако для рассмотрения результатов секвенирования матриц, отличающихся неэквивалентным нуклеотидным составом, требуется проводить анализ электрофореграмм с сохранением информации об интенсивности сигналов флуоресценции. В особенности это касается секвенирования ДНК, модифицированной бисульфитом натрия. Цель: разработать и апробировать в практике научных исследований компьютерную программу для обеспечения адекватного анализа электрофореграмм секвенирования ДНК по Сэнгеру на основе бережного отношения к первичным данным и аккуратного определения базовых линий в спектральных каналах отдельных нуклеотидов. Методы. Программа SeqBase написана на языке C#, программная платформа .NET Framework 4.0, и выполняется в среде исполнения CLR (Common Language Runtime) для операционных систем семейства Windows. Адрес установочного пакета программы SeqBase: http://www.epigenetic.ru/projects/seqbase. Результаты. Разработана компьютерная программа, предназначенная для анализа первичных результатов секвенирования по Сэнгеру (хроматограмм капиллярного электрофореза), полученных на автоматических генетических анализаторах и представленных в файлах формата ABIF (*.ab1), обеспечивающая следующие возможности: 1) просмотр исходных электрофореграмм как в общем виде, так и раздельно по спектральным каналам; 2) кадрирование области анализа; 3) сглаживание сигналов; 4) ручная установка базовой линии по каждому из спектральных каналов; 5) сведение базовых линий по всем каналам; 6) ручная коррекция подвижности фрагментов ДНК в зависимости от типа флуоресцентной метки терминирующего нуклеотида. Апробация программы успешно проведена в рамках ряда исследований, результаты которых опубликованы в рецензируемых научных изданиях. Заключение. Использование программы SeqBase целесообразно для анализа результатов секвенирования по Сэнгеру матриц ДНК с неэквивалентным нуклеотидным составом, в особенности, модифицированных бисульфитом натрия, во избежание получения ложных результатов и для уточнения количественных оценок. Background. The software provided by the manufacturers of automatic genetic analyzers, in most cases, allows an adequate analysis of the results of Sanger DNA sequencing for templates with a nucleotide composition close to the equivalent. However, to consider the results of sequencing of templates with non-equivalent nucleotide composition, it is necessary to analyze electrophoregrams with preservation of primary information on the intensity of fluorescence signals. This is especially important for the sequencing of DNA modified with sodium bisulfite. Aim: to develop and validate in the practice of scientific research a computer program that ensures adequate analysis of electrophoregrams of Sanger DNA sequencing based on preservation of the primary data and on accurate determination of baselines in the spectral channels of individual nucleotides. Methods. The SeqBase program is written in C#, the programming platform .NET Framework 4.0, and runs in the CLR (Common Language Runtime) for Windows operating systems. SeqBase installation package address is http://www.epigenetic.ru/projects/seqbase. Results. A computer program has been developed designed to analyze the primary results of Sanger sequencing (chromatograms of capillary electrophoresis) obtained from automatic genetic analyzers and presented in files of the ABIF (*.ab1) format, which provides the following functions: 1) viewing the original electrophoregrams both in general form and separately by spectral channels; 2) cropping the area of analysis; 3) signal smoothing; 4) manual setting of the baseline for each of the spectral channels; 5) convergence of baselines on all channels; 6) manual correction of the mobility of DNA fragments depending on the type of fluorescent label of the terminating nucleotide. The program has been successfully tested in a number of studies, the results of which have been published in peer-reviewed scientific journals. Conclusion. The use of the SeqBase program is advisable for the analysis of the results of Sanger sequencing of DNA templates with non-equivalent nucleotide composition, especially those modified with sodium bisulfite, to avoid false results and to clarify quantitative estimates.

The Effect of Reaction Time and Temperature on the Synthesis of Methyl Ester Sulfonate Surfactant from Palm Oil as a Feedstock using Microwave-Assisted Heating

Methyl ester sulfonate is an anionic surfactant that can be synthesized from palm oil as a raw material with the addition of sodium bisulfite and calcium oxide catalyst through transesterification and sulfonation process using microwave-assisted heating. The effect of microwave-assisted heating in the transesterification-sulfonation process was investigated in this study. The transesterification process was carried out using a microwave power of 300 watts for 10 minutes with an addition of a KOH catalyst of 1%. The transesterification process gave a result of palm oil methyl ester with a yield of up to 98% and density of 0.8546 gr/ml, and kinematic viscosity of 3.19 cSt. The sulfonation process is carried out using palm oil methyl ester and sodium bisulfite with a mole ratio of 1:3 and calcium oxide catalyst of 1.5% with the microwave power of 300 watts while varying the sulfonation time and temperature. The physicochemical properties of methyl ester sulfonate were analyzed, and the sulfonate group was characterized using FTIR. The optimum condition gave a yield of up to 98.68%, the density of 0.8657 gr/ml, viscosity of 3.75 cSt, pH of 2.12, and surface tension of up to 27.34 dyne/cm at a temperature of 100oC and sulfonation time of 40 minutes.