Abstract. Setyastuti A, Purbiantoro W, Hadiyanto. 2018. Spatial distribution of echinoderms in littoral area of Ambon Island, EasternIndonesia. Biodiversitas 19: 1919-1925. Echinoderms samples were collected in Ambon Island as part of the marine resourceinventories designed to study the biodiversity of Maluku Archipelago. The purpose of this works was to investigate the abundance andgenus richness of echinoderms within the five sampling sites using single transect orthogonal to the coast consisted of 10-quadrat plot of5x5m, the distance between plots was 10m at each site. Furthermore, this study also aimed to understand the relation of substrate typeand community composition within those five sites. The substrate was classified into four types (sea-grass, macro-algae, sand, rocksand/or dead coral) noted by presence/absence mark at each plot. The differences in total abundance and genus richness among thosesites were analyzed using an Analysis of Deviance following a Generalized Linear Models (GLMs) fitted by Poisson and log link.However, in term of genus composition, the data were visualized using a Principal Coordination Analysis (PCoA) plots calculated fromBray-Curtis dissimilarity based on the log (x+1) transformed abundance data. A total of 910 individuals of echinoderms belonging to 19genera was successfully recorded. Total abundance of echinoderms was different significantly among sites (p<0.05). The most abundantechinoderms were collected from Tanjung Tiram, approximately 68.71 individuals/quadrat, which was almost 1.4 times than those inLiang and even 4 times than those in Suli. The genus composition between sites was significantly different (p<0.05). The composition ofsubstrate types among sites was not significantly different (p>0.05), however the composition of substrates correlated significantly withthe composition of echinoderms genus (p<0.05, rho=0.36). In conclusion, more complex the substrate variation in an area will affect thediversity and abundance of Echinoderms community therein.