alkyl tail
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2021 ◽  
Vol 7 (24) ◽  
pp. eabf5325
Author(s):  
Shintaro Maeda ◽  
Yuki Shiimura ◽  
Hidetsugu Asada ◽  
Kunio Hirata ◽  
Fangjia Luo ◽  
...  

Sphingosine-1-phosphate (S1P) regulates numerous important physiological functions, including immune response and vascular integrity, via its cognate receptors (S1PR1 to S1PR5); however, it remains unclear how S1P activates S1PRs upon binding. Here, we determined the crystal structure of the active human S1PR3 in complex with its natural agonist S1P at 3.2-Å resolution. S1P exhibits an unbent conformation in the long tunnel, which penetrates through the receptor obliquely. Compared with the inactive S1PR1 structure, four residues surrounding the alkyl tail of S1P (the “quartet core”) exhibit orchestrating rotamer changes that accommodate the moiety, thereby inducing an active conformation. In addition, we reveal that the quartet core determines G protein selectivity of S1PR3. These results offer insight into the structural basis of activation and biased signaling in G protein–coupled receptors and will help the design of biased ligands for optimized therapeutics.


Author(s):  
Alessandro Mariani ◽  
Alessandro Innocenti ◽  
Alberto Varzi ◽  
Stefano Passerini

Herein we report the first in-dept structural characterization of simple linear carboxylic acids with alkyl tail length ranging from one to six carbon atoms. By means of SWAXS technique, a...


2020 ◽  
Author(s):  
Benson T. Jung ◽  
Marc Lim ◽  
Katherine Jung ◽  
Michael Li ◽  
He Dong ◽  
...  

AbstractBiological constraints in diseased tissues have motivated the need for small nanocarriers (10-30 nm) to achieve sufficient vascular extravasation and pervasive tumor penetration. This particle size limit is only an order of magnitude larger than small molecules, such that cargo loading is better described by co-assembly processes rather than simple encapsulation. Understanding the structural, kinetic, and energetic contributions of carrier-cargo co-assembly is thus critical to achieve molecular-level control and predictable in vivo behavior. These interconnected set of properties were systematically examined using sub-20 nm self-assembled nanocarriers known as three-helix micelles (3HM). Both hydrophobicity and the “geometric packing parameter” dictate small molecule compatibility with 3HM’s alkyl tail core. Planar obelisk-like apomorphine and doxorubicin (DOX) molecules intercalated well within the 3HM core and near the core-shell interface, forming an integral component to the co-assembly, as corroborated by small angle X-ray and neutron-scattering structural studies. DOX promoted crystalline alkyl tail ordering, which significantly increased (+63%) the activation energy of 3HM subunit exchange. Subsequently, 3HM-DOX displayed slow-release kinetics (t1/2=40 h) at physiological temperatures, with ~50x greater cargo preference for the micelle core as described by two drug partitioning coefficients (micellar core/shell Kp1 ~24, and shell/bulk solvent Kp2 ~2). The geometric and energetic insights between nanocarrier and their small molecule cargos developed here will aid in broader efforts to deconvolute the interconnected properties of carrier-drug co-assemblies, and to understand nanomedicine behavior throughout all the physical and in vivo processes they are intended to encounter.


2020 ◽  
Vol 7 (10) ◽  
pp. 2050-2059
Author(s):  
Sriram Sundaresan ◽  
Jonathan A. Kitchen ◽  
Sally Brooker

Linear correlation of the hydrophobic alkyl tail length R employed in [FeII(LH-OR)(NCBH3)2] with the spin crossover switching temperature is a very convenient method of predictably tuning the iron(ii) spin state.


2020 ◽  
Vol 22 (27) ◽  
pp. 15197-15207
Author(s):  
Poornima Kalyanram ◽  
Huilin Ma ◽  
Shena Marshall ◽  
Christina Goudreau ◽  
Ana Cartaya ◽  
...  

The interaction of novel amphiphilic aminomethylcoumarin molecules with liposomal lipid bilayer is dependent on tail chain length and concentration.


The reaction between substituted 4-hydroxybenzaldehyde, active methylene compounds iminochromene derivatives. Structures of the sewere established upon the basis of IR,1HNMR,13CNMR,and MASS data. Invitro, antioxidants activities oft hese compounds against superoxide anion radical, nitric oxide radical, DPPH radical and hydrogen peroxide were evaluated and compared with standard natural antioxidants ascorbicacid.


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