Profiling signalling pathways in formalin-fixed and paraffin-embedded breast cancer tissues reveals cross-talk between EGFR, HER2, HER3 and uPAR

Cross-Talk Between Cell Mechanics and Biochemical Signalling Pathways via Modulation of Nucleocytoplasmic Shuttling of Transcription Factors: A Novel Approach to Study Fibroblasts in Breast Cancer Environments

IRC-SET 2018 ◽

10.1007/978-981-32-9828-6_14 ◽

2019 ◽

pp. 153-171

Author(s):

Kia Hui Lim

Keyword(s):

Breast Cancer ◽

Transcription Factors ◽

Cross Talk ◽

Cell Mechanics ◽

Signalling Pathways ◽

Nucleocytoplasmic Shuttling ◽

Novel Approach

Abstract 3833: Systematic evaluation of transcriptome sequencing shows comparable profiles for an exome-capture method for formalin-fixed, paraffin-embedded (FFPE) breast cancer tissues and the standard poly-A method for matched fresh frozen (FF) tissues

10.1158/1538-7445.am2017-3833 ◽

2017 ◽

Author(s):

Xi Zhao ◽

Marianna Zavodovskaya ◽

Luting Zhuo ◽

Kevin Kwei ◽

Xin Guo ◽

...

Keyword(s):

Breast Cancer ◽

Transcriptome Sequencing ◽

Systematic Evaluation ◽

Exome Capture ◽

Formalin Fixed Paraffin ◽

Fresh Frozen ◽

Capture Method ◽

Cancer Tissues ◽

Fusion Transcript Discovery in Formalin-Fixed Paraffin-Embedded Human Breast Cancer Tissues Reveals a Link to Tumor Progression

PLoS ONE ◽

10.1371/journal.pone.0094202 ◽

2014 ◽

Vol 9 (4) ◽

pp. e94202 ◽

Cited By ~ 12

Author(s):

Yan Ma ◽

Ranjana Ambannavar ◽

James Stephans ◽

Jennie Jeong ◽

Andrew Dei Rossi ◽

...

Keyword(s):

Breast Cancer ◽

Tumor Progression ◽

Human Breast Cancer ◽

Fusion Transcript ◽

Human Breast ◽

Formalin Fixed Paraffin ◽

Cancer Tissues ◽

Transcript Discovery ◽

Abstract C10: Quantitative proteomics of formalin-fixed paraffin-embedded, primary triple-negative breast cancer tissues of patients who experienced distant metastasis or no recurrence

10.1158/1535-7163.targ-15-c10 ◽

2015 ◽

Author(s):

Martin H. Pedersen ◽

Brian L. Hood ◽

Thomas P. Conrads ◽

Henrik J. Ditzel ◽

Rikke Leth-Larsen

Keyword(s):

Breast Cancer ◽

Triple Negative Breast Cancer ◽

Distant Metastasis ◽

Quantitative Proteomics ◽

Triple Negative ◽

Formalin Fixed Paraffin ◽

Cancer Tissues ◽

Comparison of gene expression profiling by reverse transcription quantitative PCR between fresh frozen and formalin-fixed, paraffin-embedded breast cancer tissues

BioTechniques ◽

10.2144/000113388 ◽

2010 ◽

Vol 48 (5) ◽

pp. 389-397 ◽

Cited By ~ 39

Author(s):

Iker Sánchez-Navarro* ◽

Angelo Gámez-Pozo* ◽

Manuel González-Barón ◽

Álvaro Pinto-Marín ◽

David Hardisson ◽

...

Keyword(s):

Breast Cancer ◽

Gene Expression ◽

Reverse Transcription ◽

Expression Profiling ◽

Formalin Fixed Paraffin ◽

Reverse Transcription Quantitative Pcr ◽

Fresh Frozen ◽

Cancer Tissues ◽

Analyses and interpretation of whole-genome gene expression from formalin-fixed paraffin-embedded tissue: an illustration with breast cancer tissues

BMC Genomics ◽

10.1186/1471-2164-11-622 ◽

2010 ◽

Vol 11 (1) ◽

Cited By ~ 20

Author(s):

Muhammad G Kibriya ◽

Farzana Jasmine ◽

Shantanu Roy ◽

Rachelle M Paul-Brutus ◽

Maria Argos ◽

...

Keyword(s):

Breast Cancer ◽

Gene Expression ◽

Whole Genome ◽

Formalin Fixed Paraffin ◽

Cancer Tissues ◽

Gene expression analysis of formalin-fixed, paraffin-embedded breast cancer tissues using the multiplex branched DNA assay

European Journal of Cancer Supplements ◽

10.1016/s1359-6349(08)71349-1 ◽

2008 ◽

Vol 6 (9) ◽

pp. 46

Author(s):

H. Landmark-Hoyvik ◽

V. Dumeaux ◽

H.G. Russnes ◽

L. Jansen ◽

J. Davies ◽

...

Keyword(s):

Breast Cancer ◽

Gene Expression ◽

Expression Analysis ◽

Gene Expression Analysis ◽

Dna Assay ◽

Branched Dna ◽

Formalin Fixed Paraffin ◽

Cancer Tissues ◽

Nucleic acid sequence-based amplification in formalin-fixed and paraffin-embedded breast-cancer tissues

Journal of Clinical Pathology ◽

10.1136/jcp.2010.078766 ◽

2010 ◽

Vol 63 (12) ◽

pp. 1071-1076 ◽

Cited By ~ 2

Author(s):

U. Riehle ◽

A. Mader ◽

T. Brandstetter ◽

J. Ruhe ◽

A. zur Hausen ◽

...

Keyword(s):

Breast Cancer ◽

Nucleic Acid ◽

Nucleic Acid Sequence ◽

Cancer Tissues ◽

Erratum: Robust global micro-RNA profiling with formalin-fixed paraffin-embedded breast cancer tissues

Laboratory Investigation ◽

10.1038/labinvest.2009.46 ◽

2009 ◽

Vol 89 (6) ◽

pp. 726-726

Author(s):

Angela B Y Hui ◽

Wei Shi ◽

Paul C Boutros ◽

Naomi Miller ◽

Melania Pintilie ◽

...

Keyword(s):

Breast Cancer ◽

Micro Rna ◽

Rna Profiling ◽

Formalin Fixed Paraffin ◽

Cancer Tissues ◽

Oligonucleotide Probe Array for p53 Gene Alteration Analysis in DNA from Formalin-Fixed Paraffin-Embedded Breast Cancer Tissues

Annals of the New York Academy of Sciences ◽

10.1111/j.1749-6632.2009.04969.x ◽

2009 ◽

Vol 1175 (1) ◽

pp. 89-92 ◽

Cited By ~ 2

Author(s):

Franco Lumachi ◽

Filippo Marino ◽

Sergio Varotto ◽

Umberto Basso

Keyword(s):

Breast Cancer ◽

Oligonucleotide Probe ◽

P53 Gene ◽

Gene Alteration ◽

Formalin Fixed Paraffin ◽

Cancer Tissues ◽

Formalin Fixed ◽

Probe Array