Characterization of de novo transcriptome for waterhemp (Amaranthus tuberculatus) using GS-FLX 454 pyrosequencing and its application for studies of herbicide target-site genes

Chance W Riggins; Yanhui Peng; C Neal Stewart; Patrick J Tranel

doi:10.1002/ps.2006

Characterization of de novo transcriptome for waterhemp (Amaranthus tuberculatus) using GS-FLX 454 pyrosequencing and its application for studies of herbicide target-site genes

Pest Management Science ◽

10.1002/ps.2006 ◽

2010 ◽

Vol 66 (10) ◽

pp. 1042-1052 ◽

Cited By ~ 61

Author(s):

Chance W Riggins ◽

Yanhui Peng ◽

C Neal Stewart ◽

Patrick J Tranel

Keyword(s):

454 Pyrosequencing ◽

De Novo ◽

Target Site ◽

De Novo Transcriptome ◽

Amaranthus Tuberculatus

Download Full-text

Identification and characterization of expressed TIR- and non-TIR-NBS-LRR resistance gene analogous sequences from radish (Raphanus sativus L.) de novo transcriptome

Scientia Horticulturae ◽

10.1016/j.scienta.2016.12.019 ◽

2017 ◽

Vol 216 ◽

pp. 284-292 ◽

Cited By ~ 1

Author(s):

Yan Wang ◽

Zhaohui Song ◽

Wei Zhang ◽

Liang Xu ◽

Xiaojun Su ◽

...

Keyword(s):

Resistance Gene ◽

Raphanus Sativus ◽

De Novo ◽

De Novo Transcriptome ◽

Raphanus Sativus L ◽

Identification And Characterization

Download Full-text

De novo transcriptome characterization of Vitis vinifera cv. Corvina unveils varietal diversity

BMC Genomics ◽

10.1186/1471-2164-14-41 ◽

2013 ◽

Vol 14 (1) ◽

pp. 41 ◽

Cited By ~ 66

Author(s):

Luca Venturini ◽

Alberto Ferrarini ◽

Sara Zenoni ◽

Giovanni Battista Tornielli ◽

Marianna Fasoli ◽

...

Keyword(s):

Vitis Vinifera ◽

De Novo ◽

De Novo Transcriptome ◽

Varietal Diversity

Download Full-text

De Novo transcriptome characterization of Dracaena cambodiana and analysis of genes involved in flavonoid accumulation during formation of dragon’s blood

Scientific Reports ◽

10.1038/srep38315 ◽

2016 ◽

Vol 6 (1) ◽

Cited By ~ 12

Author(s):

Jia-Hong Zhu ◽

Tian-Jun Cao ◽

Hao-Fu Dai ◽

Hui-Liang Li ◽

Dong Guo ◽

...

Keyword(s):

De Novo ◽

De Novo Transcriptome ◽

Dragon’S Blood ◽

Dracaena Cambodiana ◽

Flavonoid Accumulation

Download Full-text

Characterization of ovary genes of beet webworm,Loxostege sticticalis, through de novo transcriptome analysis and its potential application in ovary grading

Entomologia Experimentalis et Applicata ◽

10.1111/eea.12512 ◽

2016 ◽

Vol 161 (3) ◽

pp. 193-202

Author(s):

Xinda Lin ◽

Juan Zeng ◽

Bo Wang ◽

Yun Yao ◽

Yongjun Du

Keyword(s):

Transcriptome Analysis ◽

Potential Application ◽

De Novo ◽

De Novo Transcriptome

Download Full-text

De novo transcriptome assembly for the lobster Homarus americanus and characterization of differential gene expression across nervous system tissues

BMC Genomics ◽

10.1186/s12864-016-2373-3 ◽

2016 ◽

Vol 17 (1) ◽

Cited By ~ 19

Author(s):

Lara Lewis McGrath ◽

Steven V. Vollmer ◽

Stefan T. Kaluziak ◽

Joseph Ayers

Keyword(s):

Gene Expression ◽

Nervous System ◽

Differential Gene Expression ◽

De Novo ◽

Transcriptome Assembly ◽

Homarus Americanus ◽

De Novo Transcriptome Assembly ◽

De Novo Transcriptome ◽

Differential Gene

Download Full-text

De novo transcriptome characterization of Lilium ‘Sorbonne’ and key enzymes related to the flavonoid biosynthesis

Molecular Genetics and Genomics ◽

10.1007/s00438-014-0919-0 ◽

2014 ◽

Vol 290 (1) ◽

pp. 399-412 ◽

Cited By ~ 26

Author(s):

Ming-fang Zhang ◽

Ling-min Jiang ◽

Dong-mei Zhang ◽

Gui-xia Jia

Keyword(s):

De Novo ◽

Flavonoid Biosynthesis ◽

De Novo Transcriptome ◽

Key Enzymes

Download Full-text

De novo transcriptome assembly and characterization of the 10-hydroxycamptothecin-producing Xylaria sp. M71 following salicylic acid treatment

The Journal of Microbiology ◽

10.1007/s12275-017-7173-1 ◽

2017 ◽

Vol 55 (11) ◽

pp. 871-876 ◽

Cited By ~ 1

Author(s):

Xiaowei Ding ◽

Kaihui Liu ◽

Yonggui Zhang ◽

Feihu Liu

Keyword(s):

Salicylic Acid ◽

Acid Treatment ◽

De Novo ◽

Transcriptome Assembly ◽

De Novo Transcriptome Assembly ◽

De Novo Transcriptome ◽

Salicylic Acid Treatment

Download Full-text

De novo transcriptome assembly and characterization of nine tissues of Lonicera japonica to identify potential candidate genes involved in chlorogenic acid, luteolosides, and secoiridoid biosynthesis pathways

Journal of Natural Medicines ◽

10.1007/s11418-016-1041-x ◽

2016 ◽

Vol 71 (1) ◽

pp. 1-15 ◽

Cited By ~ 28

Author(s):

Amit Rai ◽

Hidetaka Kamochi ◽

Hideyuki Suzuki ◽

Michimi Nakamura ◽

Hiroki Takahashi ◽

...

Keyword(s):

Chlorogenic Acid ◽

Candidate Genes ◽

De Novo ◽

Transcriptome Assembly ◽

Lonicera Japonica ◽

Potential Candidate ◽

De Novo Transcriptome Assembly ◽

De Novo Transcriptome

Download Full-text

De novo Transcriptome Characterization of Rhodomyrtus tomentosa Leaves and Identification of Genes Involved in α/β-Pinene and β-Caryophyllene Biosynthesis

Frontiers in Plant Science ◽

10.3389/fpls.2018.01231 ◽

2018 ◽

Vol 9 ◽

Cited By ~ 4

Author(s):

Si-Mei He ◽

Xiao Wang ◽

Sheng-Chao Yang ◽

Yang Dong ◽

Qi-Ming Zhao ◽

...

Keyword(s):

De Novo ◽

De Novo Transcriptome ◽

Rhodomyrtus Tomentosa

Download Full-text

De novo Sequence Assembly and Characterization of Lycoris aurea Transcriptome Using GS FLX Titanium Platform of 454 Pyrosequencing

PLoS ONE ◽

10.1371/journal.pone.0060449 ◽

2013 ◽

Vol 8 (4) ◽

pp. e60449 ◽

Cited By ~ 27

Author(s):

Ren Wang ◽

Sheng Xu ◽

Yumei Jiang ◽

Jingwei Jiang ◽

Xiaodan Li ◽

...

Keyword(s):

454 Pyrosequencing ◽

De Novo ◽

Sequence Assembly ◽

Lycoris Aurea ◽

De Novo Sequence Assembly

Download Full-text