Detection of Influenza in the Epidemic Season 2016/2017 Based on I–MOVE+ Project

Author(s):  
E. Hallmann-Szelińska ◽  
K. Cieślak ◽  
K. Szymański ◽  
D. Kowalczyk ◽  
M. R. Korczyńska ◽  
...  
Keyword(s):  
2016 ◽  
Vol 18 (3) ◽  
pp. 8-11 ◽  
Author(s):  
A.Yu. Popova ◽  
◽  
E.B. Ezhlova ◽  
A.A. Melnikova ◽  
N.V. Frolova ◽  
...  

Viruses ◽  
2021 ◽  
Vol 13 (4) ◽  
pp. 619
Author(s):  
Lirong Cao ◽  
Shi Zhao ◽  
Jingzhi Lou ◽  
Hong Zheng ◽  
Renee W. Y. Chan ◽  
...  

Assessment of influenza vaccine effectiveness (VE) and identification of relevant influencing factors are the current priorities for optimizing vaccines to reduce the impacts of influenza. To date, how the difference between epidemic strains and vaccine strains at genetic scale affects age-specific vaccine performance remains ambiguous. This study investigated the association between genetic mismatch on hemagglutinin and neuraminidase genes and A(H1N1)pdm09 VE in different age groups with a novel computational approach. We found significant linear relationships between VE and genetic mismatch in children, young adults, and middle-aged adults. In the children’s group, each 3-key amino acid mutation was associated with an average of 10% decrease in vaccine effectiveness in a given epidemic season, and genetic mismatch exerted no influence on VE for the elderly group. We demonstrated that present vaccines were most effective for children, while protection for the elderly was reduced and indifferent to vaccine component updates. Modeling such relationships is practical to inform timely evaluation of VE in different groups of populations during mass vaccination and may inform age-specific vaccination regimens.


2015 ◽  
Vol 3 (2) ◽  
Author(s):  
Petri Jalovaara ◽  
Polina Mishel ◽  
Hannimari Kallio-Kokko ◽  
Miia Valkonen ◽  
Anu Kantele ◽  
...  

2021 ◽  
Author(s):  
Kosuke Soda ◽  
Yukiko Tomioka ◽  
Chiharu Hidaka ◽  
Mayu Matsushita ◽  
Tatsufumi Usui ◽  
...  

Abstract Background: There were large outbreaks of high pathogenicity avian influenza (HPAI) caused by clade 2.3.4.4e H5N6 viruses in the winter of 2016–2017 in Japan, which caused large numbers of deaths among several endangered bird species including cranes, raptors, and birds in Family Anatidae. In this study, susceptibility of common Anatidae to a clade 2.3.4.4e H5N6 HPAI virus was assessed to evaluate their potential to be a source of infection for other birds. Eurasian wigeons (Mareca penelope), mallards (Anas platyrhynchos), and Northern pintails (Anas acuta) were intranasally inoculated with 106, 104, or 102 50% egg infectious dose (EID50) of clade 2.3.4.4e A/teal/Tottori/1/2016 (H5N6). Results: All birds survived for 10 days without showing any clinical signs of infection. Most ducks inoculated with ≥104 EID50 of virus seroconverted within 10 days post-inoculation (dpi). Virus was mainly shed via the oral route for a maximum of 10 days, followed by cloacal route in late phase of infection. Virus remained in the pancreas of some ducks at 10 dpi. Viremia was observed in some ducks euthanized at 3 dpi, and ≤106.3 EID50 of virus was recovered from systemic tissues and swab samples including eyeballs and conjunctival swabs. Conclusions: These results indicate that the subject duck species have a potential to be a source of infection of clade 2.3.4.4e HPAI virus to the environment and other birds sharing their habitats. Captive ducks should be reared under isolated or separated circumstances during the HPAI epidemic season to prevent infection and further viral dissemination.


Author(s):  
O. Smutko ◽  
L. Radchenko ◽  
A. Mironenko

The aim of the present study was identifying of molecular and genetic changes in hemaglutinin (HA), neuraminidase (NA) and non-structure protein (NS1) genes of pandemic influenza A(H1N1)pdm09 strains, that circulated in Ukraine during 2015-2016 epidemic season. Samples (nasopharyngeal swabs from patients) were analyzed using real-time polymerase chain reaction (RTPCR). Phylogenetic trees were constructed using MEGA 7 software. 3D structures were constructed in Chimera 1.11.2rc software. Viruses were collected in 2015-2016 season fell into genetic group 6B and in two emerging subgroups, 6B.1 and 6B.2 by gene of HA and NA. Subgroups 6B.1 and 6B.2 are defined by the following amino acid substitutions. In the NS1 protein were identified new amino acid substitutions D2E, N48S, and E125D in 2015-2016 epidemic season. Specific changes were observed in HA protein antigenic sites, but viruses saved similarity to vaccine strain. NS1 protein acquired substitution associated with increased virulence of the influenza virus.


2001 ◽  
Vol 75 (7) ◽  
pp. 576-577
Author(s):  
Keiji SAHARA ◽  
Masaaki SUGIEDA ◽  
Hiromi NAGAOKA ◽  
Masato AKIYAMA ◽  
Hiromi UENOYAMA ◽  
...  

2020 ◽  
Author(s):  
Lei Zhang ◽  
Xunmin Ji ◽  
Tuohua Peng ◽  
Chiming He ◽  
Xiaoling Zheng ◽  
...  

Abstract Background: In the summer of 2019 an outbreak of Nosocomial infections in a newborn nursery occurred in a Shunde hospital near Foshan, resulting in five babies deaths. Echovirus-11 was proven to be the responsible agent. Echovirus-11 infections are a significant health threat in the hospitals and occasionally cause severe neurological complications and even death in children. Although good hand hygiene is important for controlling infection, relevant data regarding the efficacy of widely used hand disinfectants against Echovirus-11 are still lacking. Aim: To investigate the virucidal activity of widely used hand disinfectants against Echovirus-11. Methods: The 13 widely used hand disinfectants from Guangdong hospitals were tested for virucidal activity against Echovirus-11 with the identification test of residual disinfectants removal and the suspension test with a 60 s exposure time based on Technical Standard For Disinfection (2002). Findings: Both Disinfectant A and Disinfectant C achieved a mean log10 reduction factor in Echovirus-11 titre of ≥ 5.00, respectively, within 60 s. Disinfectant B, Disinfectant D, Disinfectant H and Disinfectant M had an effect on Echovirus-11 in a mean log10 reduction factor of ≥ 4.00.By contrast, Disinfectant E, Disinfectant F, Disinfectant G, Disinfectant I, Disinfectant J, Disinfectant K and Disinfectant L didn't improved the mean log10 reduction factor in Echovirus-11 titre with producing a factor of <4 after a 60 s exposure time.Conclusions: 46.2% (6/13 products) of widely used hand disinfectants have effectiveness against Echovirus-11. In general, it is risky to rely too much on hand disinfectants. In case of epidemic season or definite enterovirus contamination, washing hands with soap and water is recommended for reducing viral contamination of enterovirus 11 in clinical practice, rather than hand hygiene with alcohol-based hand disinfectants alone.


Author(s):  
K. Łuniewska ◽  
K. Szymański ◽  
E. Hallmann-Szelińska ◽  
D. Kowalczyk ◽  
R. Sałamatin ◽  
...  

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