An Ecological Context Toward Understanding Dengue Disease Dynamics in Urban Cities: A Case Study in Metropolitan Manila, Philippines

Author(s):  
Thaddeus M. Carvajal ◽  
Howell T. Ho ◽  
Lara Fides T. Hernandez ◽  
Katherine M. Viacrusis ◽  
Divina M. Amalin ◽  
...  
2020 ◽  
Vol 7 (4) ◽  
pp. 181843 ◽  
Author(s):  
Thomas Rawson ◽  
Kym E. Wilkins ◽  
Michael B. Bonsall

Dengue is a debilitating and devastating viral infection spread by mosquito vectors, and over half the world’s population currently live at risk of dengue (and other flavivirus) infections. Here, we use an integrated epidemiological and vector ecology framework to predict optimal approaches for tackling dengue. Our aim is to investigate how vector control and/or vaccination strategies can be best combined and implemented for dengue disease control on small networks, and whether these optimal strategies differ under different circumstances. We show that a combination of vaccination programmes and the release of genetically modified self-limiting mosquitoes (comparable to sterile insect approaches) is always considered the most beneficial strategy for reducing the number of infected individuals, owing to both methods having differing impacts on the underlying disease dynamics. Additionally, depending on the impact of human movement on the disease dynamics, the optimal way to combat the spread of dengue is to focus prevention efforts on large population centres. Using mathematical frameworks, such as optimal control, are essential in developing predictive management and mitigation strategies for dengue disease control.


2020 ◽  
Author(s):  
Micanaldo Ernesto Francisco ◽  
Thaddeus M. Carvajal ◽  
Masahiro Ryo ◽  
Kei Nukazawa ◽  
Divina M. Amalin ◽  
...  

ABSTRACTBackgroundDengue is an endemic vector-borne disease influenced by environmental factors such as landscape and climate. Previous studies separately assessed the effects of landscape and climate factors on mosquito occurrence and dengue incidence. However, both factors interact in time and space to affect mosquito development and dengue disease transmission. For example, eggs laid in a suitable environment can hatch after being submerged in rain or flood water.ObjectivesThis study aimed to investigate the combined influences of landscape and climate factors on mosquito occurrence and dengue incidence.MethodsEntomological, epidemiological, and landscape data from the rainy season (July-December) were obtained from respective government agencies in Metro Manila, Philippines, from 2012 to 2014. Temperature, precipitation, and vegetation data were obtained through remote sensing. A random forest algorithm was used to select the landscape and climate variables. Afterwards, using the identified key variables, a model-based (MOB) recursive partitioning was implemented to test the combinatory influences of landscape and climate factors on the ovitrap index and dengue incidence.ResultsThe MOB recursive partitioning for the ovitrap index indicated that mosquito occurrence was higher in high residential density areas, where industrial areas also exist and are well connected with roads. Precipitation was another key covariate modulating the effects of landscape factors, possibly by expanding breeding sites and activating mosquito reproduction. Moreover, the MOB recursive partitioning indicated that precipitation was the main predictor of dengue incidence, with a stronger effect in high residential density and commercial areas.DiscussionPrecipitation with floods has epidemiologically important implications by damaging shelters and causing population displacement, thus increasing exposure to dengue vectors. Our findings suggest that the intensification of vector control during the rainy season can be prioritized in residential and commercial areas to better control dengue disease dynamics.


2020 ◽  
Vol 2020 (1) ◽  
Author(s):  
Nauman Ahmed ◽  
Muhammad Rafiq ◽  
Dumitru Baleanu ◽  
Ali Saleh Alshomrani ◽  
Muhammad Aziz-ur Rehman

Author(s):  
Micanaldo Ernesto Francisco ◽  
Thaddeus M. Carvajal ◽  
Masahiro Ryo ◽  
Kei Nukazawa ◽  
Divina M. Amalin ◽  
...  

2019 ◽  
Author(s):  
Folashade Agusto ◽  
Amy Goldberg ◽  
Omayra Ortega ◽  
Joan Ponce ◽  
Sofya Zaytseva ◽  
...  

AbstractMalaria is a vector-borne disease that is responsible for over 400,000 deaths per year. Although countries around the world have taken measures to decrease the incidence of malaria, many regions remain endemic. Indeed, progress towards elimination has stalled in multiple countries. While control efforts are largely focused at the national level, the movement of individuals between countries may complicate the efficacy of elimination efforts. Here, we consider the case of neighboring countries Botswana and Zimbabwe, connected by human mobility. Both have improved malaria rates in recent years with differing success. We use a two-patch Ross-MacDonald Model with Lagrangian human mobility to examine the coupled disease dynamics between these two countries. In particular, we are interested in the impact that interventions for controlling malaria applied in one country can have on the incidence of malaria in the other country. We find that dynamics and interventions in Zimbabwe can dramatically influence pathways to elimination in Botswana, largely driven by Zimbabwe’s population size and larger basic reproduction number.


Author(s):  
Edward L. Ionides ◽  
Carles Bret ◽  
Aaron A. King
Keyword(s):  

2021 ◽  
Author(s):  
Fleur Hierink ◽  
Jacopo Margutti ◽  
Marc van den Homberg ◽  
Nicolas Ray

AbstractEpidemics are among the most costly and destructive natural hazards globally. To reduce the impacts of infectious disease outbreaks, the development of a risk index for infectious diseases can be effective, by shifting infectious disease control from emergency response to early detection and prevention.In this study, we introduce a methodology to construct and validate an epidemic risk index using only open data, with a specific focus on scalability. The external validation of our risk index makes use of distance sampling to correct for underreporting of infections, which is often a major source of biases, based on geographical accessibility to health facilities. We apply this methodology to assess the risk of dengue in the Philippines.The results show that the computed dengue risk correlates well with standard epidemiological metrics, i.e. dengue incidence (p = 0.002). Here, dengue risk constitutes of the two dimensions susceptibility and exposure. Susceptibility was particularly associated with dengue incidence (p = 0.047) and dengue case fatality rate (CFR) (p = 0.029). Exposure had lower correlations to dengue incidence (p = 0.211) and CFR (p = 0.163). Highest risk indices were seen in the south of the country, mainly among regions with relatively high susceptibility to dengue outbreaks.Our findings reflect that the modelled epidemic risk index is a strong indication of sub-national dengue disease patterns and has therefore proven suitability for disease risk assessments in the absence of timely epidemiological data. The presented methodology enables the construction of a practical, evidence-based tool to support public health and humanitarian decision-making processes with simple, understandable metrics. The index overcomes the main limitations of existing indices in terms of construction and actionability.Author summaryWhy Was This Study Done?– Epidemics are among the most costly and destructive natural hazards occurring globally; currently, the response to epidemics is still focused on reaction rather than prevention or preparedness.– The development of an epidemic risk index can support identifying high-risk areas and can guide prioritization of preventive action and humanitarian response.– While several frameworks for epidemic risk assessment exist, they suffer from several limitations, which resulted in limited uptake by local health actors - such as governments and humanitarian relief workers - in their decision-making processesWhat Did the Researchers Do and Find?– In this study, we present a methodology to develop epidemic risk indices, which overcomes the major limitations of previous work: strict data requirements, insufficient geographical granularity, validation against epidemiological data.– We take as a case study dengue in the Philippines and develop an epidemic risk index; we correct dengue incidence for underreporting based on accessibility to healthcare and show that it correlates well with the risk index (Pearson correlation coefficient 0.69, p-value 0.002).What Do These Findings Mean?– Our methodology enables the development of disease-specific epidemic risk indices at a sub-national level, even in countries with limited data availability; these indices can guide local actors in programming prevention and response activities.– Our findings on the case study show that the epidemic risk index is a strong indicator of sub-national dengue disease patterns and is therefore suitable for disease risk assessments in the absence of timely and complete epidemiological data.


Plants ◽  
2021 ◽  
Vol 10 (3) ◽  
pp. 574
Author(s):  
Enrico V. Perrino ◽  
Francesca Valerio ◽  
Ahmed Gannouchi ◽  
Antonio Trani ◽  
Giuseppe Mezzapesa

The study focused on the effects of ecology (plant communities and topographical data) on composition of essential oils (EOs) of some officinal wild plant species (Lamiales): Clinopodium suaveolens, Salvia fruticosa subsp. thomasii, Satureja montana subsp. montana, and Thymbra capitata, in different environments of Apulia (Italy). C. suaveolens and S. fruticosa subsp. thomasii are rare species of conservation interest, while S. montana subsp. montana and T. capitata, have a wide distribution and are used in traditional medicine or as spices. Results showed that the ecological context (phytosociological and ecological features) may influence the composition of EOs of the studied species. High differences in the compound composition have been found in S. montana subsp. montana, whereas minor effects were observed in C. suaveolens, S. fruticosa subsp. thomasii, and T. capitata accessions. The understanding of such aspects is necessary for providing optimal conditions to produce EOs rich in compounds known for their biological activities. The results are of great interest also for EOs producers and at the same time to improve our knowledge and valorize wild officinal plants.


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