Amino acids in exudates of healthy and fungus-affected pea roots

1970 ◽  
Vol 70 (3) ◽  
pp. 240-242 ◽  
Author(s):  
L. Lynn Sherrod ◽  
Klaus H. Domsch
Keyword(s):  
1971 ◽  
Vol 49 (1) ◽  
pp. 127-138 ◽  
Author(s):  
E. Pahlich ◽  
K. W. Joy

Glutamate dehydrogenase (L-glutamate: NAD+ oxidoreductase (deaminating), EC 1.4.1.2) has been purified 1250-fold from pea roots. The preparation contains only a single protein, and the molecular weight was estimated to be 208 000 ± 10 000. The enzyme shows NADH (aminating) and NAD+ (deaminating) activities, but the ratio of these activities is not constant and can be changed experimentally. NADPH activity is also present and shows a relatively constant ratio to NAD+ activity. EDTA inhibits NADH activity in intermediate concentrations, but reactivates at higher concentrations. NAD+ (and NADPH) activity is only slightly changed by EDTA. The effects of dioxane and the coenzymes on the enzyme are also reported. Mechanisms which could explain the different activity ratios, in terms of two interconvertible enzyme forms, are discussed.The pH optimum for NADH and NAD+ activities is about pH 8.0. Michaelis constants were found to be: α-ketoglutarate, 3.3 × 10−3 M; ammonium (sulfate), 3.8 × 10−2 M; glutamate, 7.3 × 10−3 M; NADH, 8.6 × 10−4 M; NAD+, 6.5 × 10−4 M. The enzyme is highly specific for the substrates glutamate and α-ketoglutarate, showing no alanine or aspartate dehydrogenase activity, and no deamination with a range of amino acids.


Pea roots have been cultured in sterile media in the presence and in the absence of added iron, and the effects of deficiency have been studied in three series of experiments. In the first, roots grown in deficient and full nutrient media were taken at intervals and on each sample growth and metabolic measurements were made. In the second, roots in which the earliest growth effects of deficiency had been observed were dissected into successive centimetre segments and metabolic and growth measurements were made on the separate fragments. In the third series of experiments the effects have been analyzed of transferring a root from a deficient medium in which growth had ceased to a full medium. It has been shown that after culture for 7 days in the deficient medium, increases in length and number of cells virtually cease; after this stage also the increase in respiration is relatively small. On the other hand protein continues to increase throughout the whole cultured period of 11 days. Oxygen absorption has been analyzed into a cyanide insensitive and a cyanide sensitive fraction, and it has been found that in the absence of iron, whereas the cyanide insensitive fraction increases continuously from the third to the eleventh day, the sensitive fraction ceases to increase after the seventh day. When roots in which growth has ceased were transferred to a full medium growth was resumed. The deficient roots were therefore not moribund. The arrest in growth is due to an abrupt cessation in division that occurs at about 7 days, and all the evidence indicates that this is the result of a disturbance confined to the meristem. The arrest in division cannot be attributed to an inhibition in the synthesis of protein. Evidence is presented which shows that in normal circumstances amino acids are probably synthesized in expanding or mature zones of the root, that they are carried forward in a polar translocation stream, and that they condense with the formation of proteins in cells that are being formed by meristematic activity. In the absence of iron division ceases, but the synthesis of amino acids continues. The sumps into which these acids are normally discharged are no longer provided, and they therefore tend to condense to proteins in the more mature cells adjacent to the apex. The cyanide-sensitive fraction of respiration is attributed to the activity of a cytochrome oxidase system. There is little or no further increase in this system after the time at which division ceases, and the coincidence may indicate a causal relation between the two events. But at the time when division ceases the cytochrome system is apparently normal in the apex and adjacent regions of the root. Therefore, if the cessation of division is due to arrest in the synthesis of cytochrome the position would be that a minimal quantity of cytochrome is required in the formation of a cell, and that when the supply of labile iron has been reduced to the level at which this minimal quantity cannot be provided then division ceases. This interpretation is consistent with the observation that the cessation of division is abrupt. The evidence, however, is not sufficiently extensive to warrant this conclusion, and the data do not exclude the alternative hypothesis that the depression in cytochrome synthesis is a consequence of the arrest in division.


1997 ◽  
Vol 161 ◽  
pp. 505-510
Author(s):  
Alexandra J. MacDermott ◽  
Laurence D. Barron ◽  
Andrè Brack ◽  
Thomas Buhse ◽  
John R. Cronin ◽  
...  

AbstractThe most characteristic hallmark of life is its homochirality: all biomolecules are usually of one hand, e.g. on Earth life uses only L-amino acids for protein synthesis and not their D mirror images. We therefore suggest that a search for extra-terrestrial life can be approached as a Search for Extra- Terrestrial Homochirality (SETH). The natural choice for a SETH instrument is optical rotation, and we describe a novel miniaturized space polarimeter, called the SETH Cigar, which could be used to detect optical rotation as the homochiral signature of life on other planets. Moving parts are avoided by replacing the normal rotating polarizer by multiple fixed polarizers at different angles as in the eye of the bee. We believe that homochirality may be found in the subsurface layers on Mars as a relic of extinct life, and on other solar system bodies as a sign of advanced pre-biotic chemistry. We discuss the chiral GC-MS planned for the Roland lander of the Rosetta mission to a comet and conclude with theories of the physical origin of homochirality.


1997 ◽  
Vol 161 ◽  
pp. 179-187
Author(s):  
Clifford N. Matthews ◽  
Rose A. Pesce-Rodriguez ◽  
Shirley A. Liebman

AbstractHydrogen cyanide polymers – heterogeneous solids ranging in color from yellow to orange to brown to black – may be among the organic macromolecules most readily formed within the Solar System. The non-volatile black crust of comet Halley, for example, as well as the extensive orangebrown streaks in the atmosphere of Jupiter, might consist largely of such polymers synthesized from HCN formed by photolysis of methane and ammonia, the color observed depending on the concentration of HCN involved. Laboratory studies of these ubiquitous compounds point to the presence of polyamidine structures synthesized directly from hydrogen cyanide. These would be converted by water to polypeptides which can be further hydrolyzed to α-amino acids. Black polymers and multimers with conjugated ladder structures derived from HCN could also be formed and might well be the source of the many nitrogen heterocycles, adenine included, observed after pyrolysis. The dark brown color arising from the impacts of comet P/Shoemaker-Levy 9 on Jupiter might therefore be mainly caused by the presence of HCN polymers, whether originally present, deposited by the impactor or synthesized directly from HCN. Spectroscopic detection of these predicted macromolecules and their hydrolytic and pyrolytic by-products would strengthen significantly the hypothesis that cyanide polymerization is a preferred pathway for prebiotic and extraterrestrial chemistry.


Author(s):  
E.M. Kuhn ◽  
K.D. Marenus ◽  
M. Beer

Fibers composed of different types of collagen cannot be differentiated by conventional electron microscopic stains. We are developing staining procedures aimed at identifying collagen fibers of different types.Pt(Gly-L-Met)Cl binds specifically to sulfur-containing amino acids. Different collagens have methionine (met) residues at somewhat different positions. A good correspondence has been reported between known met positions and Pt(GLM) bands in rat Type I SLS (collagen aggregates in which molecules lie adjacent to each other in exact register). We have confirmed this relationship in Type III collagen SLS (Fig. 1).


Author(s):  
R. W. Yaklich ◽  
E. L. Vigil ◽  
W. P. Wergin

The legume seed coat is the site of sucrose unloading and the metabolism of imported ureides and synthesis of amino acids for the developing embryo. The cell types directly responsible for these functions in the seed coat are not known. We recently described a convex layer of tissue on the inside surface of the soybean (Glycine max L. Merr.) seed coat that was termed “antipit” because it was in direct opposition to the concave pit on the abaxial surface of the cotyledon. Cone cells of the antipit contained numerous hypertrophied Golgi apparatus and laminated rough endoplasmic reticulum common to actively secreting cells. The initial report by Dzikowski (1936) described the morphology of the pit and antipit in G. max and found these structures in only 68 of the 169 seed accessions examined.


Author(s):  
S.A.C. Gould ◽  
B. Drake ◽  
C.B. Prater ◽  
A.L. Weisenhorn ◽  
S.M. Lindsay ◽  
...  

The atomic force microscope (AFM) is an instrument that can be used to image many samples of interest in biology and medicine. Images of polymerized amino acids, polyalanine and polyphenylalanine demonstrate the potential of the AFM for revealing the structure of molecules. Images of the protein fibrinogen which agree with TEM images demonstrate that the AFM can provide topographical data on larger molecules. Finally, images of DNA suggest the AFM may soon provide an easier and faster technique for DNA sequencing.The AFM consists of a microfabricated SiO2 triangular shaped cantilever with a diamond tip affixed at the elbow to act as a probe. The sample is mounted on a electronically driven piezoelectric crystal. It is then placed in contact with the tip and scanned. The topography of the surface causes minute deflections in the 100 μm long cantilever which are detected using an optical lever.


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