scholarly journals Interactive regulation of root exudation and rhizosphere denitrification by plant metabolite content and soil properties

2021 ◽  
Author(s):  
Daniel Maurer ◽  
François Malique ◽  
Salah Alfarraj ◽  
Gada Albasher ◽  
Marcus A. Horn ◽  
...  
Keyword(s):  
Soil Moisture ◽  
Soil Properties ◽  
Agricultural Soils ◽  
Root Exudation ◽  
Inhibitory Effect ◽  
Interactive Effects ◽  
Grass Species ◽  
Plant Soil ◽  
Plant Metabolite ◽  
Species Specific

Abstract Aims Root exudates are known to shape microbial activities in the rhizosphere and to be of fundamental importance for plant-soil-microbe-carbon–nitrogen interactions. However, it remains unclear how and to what extent the amount and composition of root exudation affects rhizosphere denitrification. Methods In this study root exudation patterns and rhizosphere denitrification enzyme activity of three different grass species grown on two agricultural soils under two different soil water contents were investigated under controlled conditions. Results We found that root exudation of primary metabolites largely depends on plant species, soil type, soil moisture and root exudation medium. In dependence of soil properties and soil moisture levels, plants largely controlled amount and quality of root exudation. Exudates affected denitrification activity and plant–microbe competition for nitrate. Specifically, exudation of organic acids stimulated denitrifying activity while the sugar lyxose exhibited an inhibitory effect. Conclusion We show that interactive effects of physicochemical soil properties and species-specific effects of plant metabolism on root exudation act as a dominant control of rhizosphere denitrification, thereby explaining more than half of its variance.

scholarly journals Drought alters plant‐soil feedback effects on biomass allocation but not on plant performance

2021 ◽  
Author(s):  
Rutger A. Wilschut ◽  
Mark van Kleunen
Keyword(s):  
Soil Moisture ◽  
Plant Species ◽  
Biomass Allocation ◽  
Plant Performance ◽  
Control Soil ◽  
Feedback Effects ◽  
Plant Soil ◽  
Soil Feedback ◽  
Species Specific ◽  
Relative Root

Abstract Aims Drought events can alter the composition of plant and soil communities, and are becoming increasingly common and severe due to climate change. However, how droughts affect plant-soil feedbacks is still poorly understood. Plants accumulate species-specific rhizosphere communities, and droughts may have varying impacts across plant species and soil biota. We therefore tested the hypothesis that drought alters plant-soil feedbacks differently among closely related plant species that differ in their preferences for soil moisture. Methods In a two-phase greenhouse experiment, we first conditioned grassland soil with seven Geranium species and, as controls, we conditioned soil with a grass species or left soil unplanted. In the second phase, we grew the Geranium species in conspecific, grass-conditioned and unplanted soil, maintained soil moisture at 5 %, 10 % or 20 % (w/w), and determined biomass responses after 35 days. Results Independent of conditioning, plants showed a weaker performance with decreasing soil moisture. Under the driest conditions, soil conditioning by conspecifics most negatively affected relative root weight in comparison to plants growing in unplanted control soil, while the effects of conspecific conditioning on relative root weights were species-specific when compared to plants grown in grass-conditioned control soil. Conclusions We conclude that decreased soil moisture modified plant-soil feedback effects on biomass allocation, and that these modifications acted in species-specific ways. However, drought effects on plant-soil feedbacks were subtle, and did not affect overall plant performance. Therefore, plant-soil feedback effects on plant performance during a drought event may be limited in comparison with the direct effects of drought.

scholarly journals Plant–soil feedbacks promote negative frequency dependence in the coexistence of two aridland grasses

2016 ◽  
Vol 283 (1835) ◽  
pp. 20160608 ◽  
Author(s):  
Y. Anny Chung ◽  
Jennifer A. Rudgers
Keyword(s):  
Frequency Dependence ◽  
Species Coexistence ◽  
Biological Soil Crusts ◽  
Grass Species ◽  
Dry Land ◽  
Plant Soil ◽  
Soil Crusts ◽  
Coexistence Mechanisms ◽  
Species Specific ◽  
Rhizospheric Microbes

Understanding the mechanisms of species coexistence is key to predicting patterns of species diversity. Historically, the ecological paradigm has been that species coexist by partitioning resources: as a species increases in abundance, self-limitation kicks in, because species-specific resources decline. However, determining coexistence mechanisms has been a particular puzzle for sedentary organisms with high overlap in their resource requirements, such as plants. Recent evidence suggests that plant-associated microbes could generate the stabilizing self-limitation (negative frequency dependence) that is required for species coexistence. Here, we test the key assumption that plant–microbe feedbacks cause such self-limitation. We used competition experiments and modelling to evaluate how two common groups of soil microbes (rhizospheric microbes and biological soil crusts) influenced the self-limitation of two competing desert grass species. Negative feedbacks between the dominant plant competitor and its rhizospheric microbes magnified self-limitation, whereas beneficial interactions between both plant species and biological soil crusts partly counteracted this stabilizing effect. Plant–microbe interactions have received relatively little attention as drivers of vegetation dynamics in dry land ecosystems. Our results suggest that microbial mechanisms can contribute to patterns of plant coexistence in arid grasslands.

scholarly journals Effects of Monoculture, Crop Rotation, and Soil Moisture Content on Selected Soil Physicochemical and Microbial Parameters in Wheat Fields

2012 ◽  
Vol 2012 ◽  
pp. 1-13 ◽  
Author(s):  
A. Marais ◽  
M. Hardy ◽  
M. Booyse ◽  
A. Botha
Keyword(s):  
Soil Moisture ◽  
Microbial Communities ◽  
Crop Rotation ◽  
Management Practices ◽  
Agricultural Soils ◽  
Soil Microbial Communities ◽  
Soil Microbial Activity ◽  
Most Probable Number ◽  
Probable Number ◽  
Soil Microbial

Different plants are known to have different soil microbial communities associated with them. Agricultural management practices such as fertiliser and pesticide addition, crop rotation, and grazing animals can lead to different microbial communities in the associated agricultural soils. Soil dilution plates, most-probable-number (MPN), community level physiological profiling (CLPP), and buried slide technique as well as some measured soil physicochemical parameters were used to determine changes during the growing season in the ecosystem profile in wheat fields subjected to wheat monoculture or wheat in annual rotation with medic/clover pasture. Statistical analyses showed that soil moisture had an over-riding effect on seasonal fluctuations in soil physicochemical and microbial populations. While within season soil microbial activity could be differentiated between wheat fields under rotational and monoculture management, these differences were not significant.

Status of trace elements in agricultural soils of Bangladesh and relationship with soil properties

2000 ◽  
Vol 46 (4) ◽  
pp. 963-968 ◽  
Author(s):  
M. Jahiruddin ◽  
H. Harada ◽  
T. Hatanaka ◽  
M.R. Islam
Keyword(s):  
Trace Elements ◽  
Soil Properties ◽  
Agricultural Soils

scholarly journals Soil moisture modifies the response of soil respiration to temperature in a desert shrub ecosystem

2014 ◽  
Vol 11 (2) ◽  
pp. 259-268 ◽  
Author(s):  
B. Wang ◽  
T. S. Zha ◽  
X. Jia ◽  
B. Wu ◽  
Y. Q. Zhang ◽  
...  
Keyword(s):  
Soil Moisture ◽  
Soil Respiration ◽  
Seasonal Cycle ◽  
Northwest China ◽  
Interactive Effects ◽  
Co2 Efflux ◽  
Diel Variation ◽  
Desert Ecosystems ◽  
Volumetric Soil Water Content ◽  
Desert Shrub

Abstract. The current understanding of the responses of soil respiration (Rs) to soil temperature (Ts) and soil moisture is limited for desert ecosystems. Soil CO2 efflux from a desert shrub ecosystem was measured continuously with automated chambers in Ningxia, northwest China, from June to October 2012. The diurnal responses of Rs to Ts were affected by soil moisture. The diel variation in Rs was strongly related to Ts at 10 cm depth under moderate and high volumetric soil water content (VWC), unlike under low VWC. Ts typically lagged Rs by 3–4 h. However, the lag time varied in relation to VWC, showing increased lag times under low VWC. Over the seasonal cycle, daily mean Rs was correlated positively with Ts, if VWC was higher than 0.08 m3 m−3. Under lower VWC, it became decoupled from Ts. The annual temperature sensitivity of Rs (Q10) was 1.5. The short-term sensitivity of Rs to Ts varied significantly over the seasonal cycle, and correlated negatively with Ts and positively with VWC. Our results highlight the biological causes of diel hysteresis between Rs and Ts, and that the response of Rs to soil moisture may result in negative feedback to climate warming in desert ecosystems. Thus, global carbon cycle models should account the interactive effects of Ts and VWC on Rs in desert ecosystems.

scholarly journals Lipoprotein-associated phospholipase A2 (Lp-PLA2) as a therapeutic target to prevent retinal vasopermeability during diabetes

2016 ◽  
Vol 113 (26) ◽  
pp. 7213-7218 ◽  
Author(s):  
Paul Canning ◽  
Bridget-Ann Kenny ◽  
Vivien Prise ◽  
Josephine Glenn ◽  
Mosharraf H. Sarker ◽  
...  
Keyword(s):  
Therapeutic Target ◽  
Vascular Function ◽  
Specific Inhibitor ◽  
Inhibitory Effect ◽  
Diabetic Rats ◽  
Brown Norway ◽  
Vegf Receptor ◽  
Blood Retinal Barrier ◽  
Species Specific ◽  
Brb Breakdown

Lipoprotein-associated phospholipase A2 (Lp-PLA2) hydrolyses oxidized low-density lipoproteins into proinflammatory products, which can have detrimental effects on vascular function. As a specific inhibitor of Lp-PLA2, darapladib has been shown to be protective against atherogenesis and vascular leakage in diabetic and hypercholesterolemic animal models. This study has investigated whether Lp-PLA2 and its major enzymatic product, lysophosphatidylcholine (LPC), are involved in blood–retinal barrier (BRB) damage during diabetic retinopathy. We assessed BRB protection in diabetic rats through use of species-specific analogs of darapladib. Systemic Lp-PLA2 inhibition using SB-435495 at 10 mg/kg (i.p.) effectively suppressed BRB breakdown in streptozotocin-diabetic Brown Norway rats. This inhibitory effect was comparable to intravitreal VEGF neutralization, and the protection against BRB dysfunction was additive when both targets were inhibited simultaneously. Mechanistic studies in primary brain and retinal microvascular endothelial cells, as well as occluded rat pial microvessels, showed that luminal but not abluminal LPC potently induced permeability, and that this required signaling by the VEGF receptor 2 (VEGFR2). Taken together, this study demonstrates that Lp-PLA2 inhibition can effectively prevent diabetes-mediated BRB dysfunction and that LPC impacts on the retinal vascular endothelium to induce vasopermeability via VEGFR2. Thus, Lp-PLA2 may be a useful therapeutic target for patients with diabetic macular edema (DME), perhaps in combination with currently administered anti-VEGF agents.

scholarly journals Satellite evidence of substantial rain-induced soil emissions of ammonia across the Sahel

2018 ◽  
Vol 18 (22) ◽  
pp. 16713-16727 ◽  
Author(s):  
Jonathan E. Hickman ◽  
Enrico Dammers ◽  
Corinne Galy-Lacaux ◽  
Guido R. van der Werf
Keyword(s):  
Soil Moisture ◽  
Rainy Season ◽  
Agricultural Soils ◽  
Fine Particulate Matter ◽  
Primary Source ◽  
N Deposition ◽  
Box Model ◽  
Ozone Monitoring Instrument ◽  
Animal Excreta ◽  
Birch Effect

Abstract. Atmospheric ammonia (NH3) is a precursor to fine particulate matter formation and contributes to nitrogen (N) deposition, with potential implications for the health of humans and ecosystems. Agricultural soils and animal excreta are the primary source of atmospheric NH3, but natural soils can also be an important emitter. In regions with distinct dry and wet seasons such as the Sahel, the start of the rainy season triggers a pulse of biogeochemical activity in surface soils known as the Birch effect, which is often accompanied by emissions of microbially produced gases such as carbon dioxide and nitric oxide. Field and lab studies have sometimes, but not always, observed pulses of NH3 after the wetting of dry soils; however, the potential regional importance of these emissions remains poorly constrained. Here we use satellite retrievals of atmospheric NH3 using the Infrared Atmospheric Sounding Interferometer (IASI) regridded at 0.25∘ resolution, in combination with satellite-based observations of precipitation, surface soil moisture, and nitrogen dioxide concentrations, to reveal substantial precipitation-induced pulses of NH3 across the Sahel at the onset of the rainy season in 2008. The highest concentrations of NH3 occur in pulses during March and April when NH3 biomass burning emissions estimated for the region are low. For the region of the Sahel spanning 10 to 16∘ N and 0 to 30∘ E, changes in NH3 concentrations are weakly but significantly correlated with changes in soil moisture during the period from mid-March through April when the peak NH3 concentrations occur (r=0.28, p=0.02). The correlation is also present when evaluated on an individual pixel basis during April (r=0.16, p<0.001). Average emissions for the entire Sahel from a simple box model are estimated to be between 2 and 6 mg NH3 m−2 d−1 during peaks of the observed pulses, depending on the assumed effective NH3 lifetime. These early season pulses are consistent with surface observations of monthly concentrations, which show an uptick in NH3 concentration at the start of the rainy season for sites in the Sahel. The NH3 concentrations in April are also correlated with increasing tropospheric NO2 concentrations observed by the Ozone Monitoring Instrument (r=0.78, p<0.0001), which have previously been attributed to the Birch effect. Box model results suggest that pulses occurring over a 35-day period in March and April are responsible for roughly one-fifth of annual emissions of NH3-N from the Sahel. We conclude that precipitation early in the rainy season is responsible for substantial NH3 emissions in the Sahel, likely representing the largest instantaneous fluxes of gas-phase N from the region during the year.

scholarly journals Interactive effects of ambient ozone and climate measured on growth of mature loblolly pine trees

1996 ◽  
Vol 26 (4) ◽  
pp. 670-681 ◽  
Author(s):  
S.B. McLaughlin ◽  
D.J. Downing
Keyword(s):  
Soil Moisture ◽  
Loblolly Pine ◽  
Moisture Stress ◽  
Growth Patterns ◽  
Forest Growth ◽  
Interactive Effects ◽  
Forest Trees ◽  
Short Term ◽  
Data Set ◽  
Ambient Ozone

Seasonal growth patterns of mature loblolly pine (Pinustaeda L.) trees over the interval 1988–1993 have been analyzed to evaluate the effects of ambient ozone on growth of large forest trees. Patterns of stem expansion and contraction of 34 trees were examined using serial measurements with sensitive dendrometer band systems. Study sites, located in eastern Tennessee, varied significantly in soil moisture, soil fertility, and stand density. Levels of ozone, rainfall, and temperature varied widely over the 6-year study interval. Regression analysis identified statistically significant influences of ozone on stem growth patterns, with responses differing widely among trees and across years. Ozone interacted with both soil moisture stress and high temperatures, explaining 63% of the high frequency, climatic variance in stem expansion identified by stepwise regression of the 5-year data set. Observed responses to ozone were rapid, typically occurring within 1–3 days of exposure to ozone at ≥40 ppb and were significantly amplified by low soil moisture and high air temperatures. Both short-term responses, apparently tied to ozone-induced increases in whole-tree water stress, and longer term cumulative responses were identified. These data indicate that relatively low levels of ambient ozone can significantly reduce growth of mature forest trees and that interactions between ambient ozone and climate are likely to be important modifiers of future forest growth and function. Additional studies of mechanisms of short-term response and interspecies comparisons are clearly needed.

scholarly journals Characterizing Soil Physical Properties for Soil Moisture Monitoring with the North Carolina Environment and Climate Observing Network

2012 ◽  
Vol 29 (7) ◽  
pp. 933-943 ◽  
Author(s):  
Weinan Pan ◽  
R. P. Boyles ◽  
J. G. White ◽  
J. L. Heitman
Keyword(s):  
North Carolina ◽  
Soil Moisture ◽  
Physical Properties ◽  
Soil Properties ◽  
Water Content ◽  
Bulk Density ◽  
Soil Physical Properties ◽  
The North ◽  
Wide Range ◽  
Soil Moisture Monitoring

Abstract Soil moisture has important implications for meteorology, climatology, hydrology, and agriculture. This has led to growing interest in development of in situ soil moisture monitoring networks. Measurement interpretation is severely limited without soil property data. In North Carolina, soil moisture has been monitored since 1999 as a routine parameter in the statewide Environment and Climate Observing Network (ECONet), but with little soils information available for ECONet sites. The objective of this paper is to provide soils data for ECONet development. The authors studied soil physical properties at 27 ECONet sites and generated a database with 13 soil physical parameters, including sand, silt, and clay contents; bulk density; total porosity; saturated hydraulic conductivity; air-dried water content; and water retention at six pressures. Soil properties were highly variable among individual ECONet sites [coefficients of variation (CVs) ranging from 12% to 80%]. This wide range of properties suggests very different behavior among sites with respect to soil moisture. A principal component analysis indicated parameter groupings associated primarily with soil texture, bulk density, and air-dried water content accounted for 80% of the total variance in the dataset. These results suggested that a few specific soil properties could be measured to provide an understanding of differences in sites with respect to major soil properties. The authors also illustrate how the measured soil properties have been used to develop new soil moisture products and data screening for the North Carolina ECONet. The methods, analysis, and results presented here have applications to North Carolina and for other regions with heterogeneous soils where soil moisture monitoring is valuable.

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