Serotype distribution and antimicrobial resistance of Streptococcus pneumoniae causing noninvasive diseases in a Children's Hospital, Shanghai

Purpose. To investigate the serotype distribution, clonal structure and antimicrobial resistance of pneumococci isolated from schoolchildren.Materials and methods. During the period from 2012 to 2018 we examined 498 healthy school children aged 6 to 17 years. Oropharyngeal swab was taken from each child for culture, after that all S. pneumoniae strains were genotyped for serotype and ST-type deduction (PCR and sequencing, respectively). Antimicrobial resistance was also determined.Results. Pneumococcal culture was positive in 10.6 % of children. S. pneumoniae isolates belonged to seven serogroups and seven serotypes. Serogroup 6 and serotype 19F strains (15.1% each), and serogroup 9 strains (13.2%) were the most prevalent. S. pneumoniae33FA/37 and 3 (9.4 and 5.7%), serogroups 15 and 18 (7.6 and 5.7%), and 10A serotype (3.8%) were determined at a lower frequency. 20 detected ST-types belonged to 14 clonal complexes (CCs); CC156, CC447, and CC320 were predominant. 1.9% of isolates were penicillin-resistant; 13.2% – macrolide-, clindamycin-, and tetracycline-resistant. S. pneumoniae antibiotic resistant strains belonged to multidrug-resistant CCs 320, 315, and 156.Conclusion. S. pneumoniae prevalence in school children is not high. Pneumococcal population is characterized by serotype and clonal diversity including ‘invasive’ serotypes and genotypes. Most of strains are susceptible to antimicrobials.

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Molecular epidemiology and antimicrobial resistance of group A streptococcus recovered from patients in Beijing, China

10.21203/rs.2.22135/v4 ◽

2020 ◽

Author(s):

Hongxin Li ◽

Lin Zhou ◽

Yong Zhao ◽

Lijuan Ma ◽

Xiaoyan Liu ◽

...

Keyword(s):

Antimicrobial Resistance ◽

Group A Streptococcus ◽

Resistance Rate ◽

Gene Profiling ◽

Epidemiological Surveillance ◽

Erythromycin Resistance ◽

Children's Hospital ◽

Children’S Hospital ◽

Group A ◽

Epidemiological Characteristics

Abstract Background: Group A streptococcus (GAS) is an important human pathogen responsible for a broad range of infections. Epidemiological surveillance has been crucial to detect changes in the geographical and temporal variation of the disease pattern. The objective of this study was to investigate the molecular epidemiological characteristics and antimicrobial resistance of GAS isolates from patients in Children’s Hospital in Beijing. Methods: From 2016 to 2017, pharyngeal swab samples were collected from the outpatients in Children’s Hospital, Capital Institute of Pediatrics, who were diagnosed with scarlet fever. Antimicrobial susceptibility test was performed according to the distribution of conventional antibiotics and Clinical and Laboratory Standards Institute (CLSI) recommendations. The distribution of the macrolide-resistance genes ( ermB, ermA, mefA ), emm (M protein-coding gene) typing, and superantigens (SAg) gene profiling were examined by polymerase chain reaction (PCR). Results: A total of 297 GAS isolates were collected. The susceptibility of the isolates to penicillin, ceftriaxone, and levofloxacin was 100%. The resistance rate to erythromycin and clindamycin was 98.3% and 96.6%, respectively. The dominant emm types were emm12 (65.32%), emm1 (27.61%), emm75 (2.69%), and emm89 (1.35%). Of the 297 isolates, 290 (97.64%) carried the ermB gene, and 5 (1.68%) carried the mefA gene, while none carried the ermA gene. The most common superantigen genes identified from GAS isolates were smeZ (96.97%) , speC (92.59%), speG (91.58%), ssa (85.52%), speI (54.55%), speH (52.19%), and speA (34.34%). Isolates with the genotype emm1 possessed speA , speC , speG , speJ , speM , ssa , and smeZ , while emm12 possessed speC , speG , speH , speI , speM , ssa , and smeZ superantigens. Conclusions: The prevalent strain of GAS isolates in Beijing has a high resistance rate to macrolides; however, penicillin can still be the preferred antibiotic for treatment. Erythromycin resistance was predominantly mediated by ermB. The common emm types were emm12 and emm1. There was a correlation between emm and the superantigen gene. Thus, long-term monitoring and investigation of the emm types and superantigen genes of GAS prevalence are imperative.

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Streptococcus pneumoniae serotype specific anti-microbial susceptibility profiles among PCV-10 vaccinated and unvaccinated children attending Gertrude’s Children’s Hospital: a cross-sectional study

F1000Research ◽

10.12688/f1000research.20486.1 ◽

2019 ◽

Vol 8 ◽

pp. 1699

Author(s):

Michael Walekhwa ◽

Margaret Muturi ◽

Eucharia Kenya ◽

Beatrice Kabera

Keyword(s):

Streptococcus Pneumoniae ◽

Pneumococcal Disease ◽

Agar Plate ◽

Significant Risk ◽

Effective Control ◽

Children's Hospital ◽

Daycare Centers ◽

Mueller Hinton ◽

Increased Risk ◽

Children’S Hospital

Background: The spread of antimicrobial resistance threatens effective control and treatment of pneumococcal disease worldwide. In Kenya, an estimated one in every five children dies from pneumococcal disease every year. Of these, ≥50% are attributable to antibiotic resistance. Consequently, the WHO has recommended that continuous regional surveillance be done to detect early resistance to available antibiotics and make necessary changes. We therefore investigated antimicrobial susceptibility patterns of Streptococcus pneumoniae among PCV-10 vaccinated and unvaccinated children ≤5 years old at Gertrude's Children’s Hospital. Methods: A 0.5 McFarland standard of freshly subcultured organisms were inoculated on Mueller–Hinton plates with 5% sheep blood agar. A standard disk dispenser was used to dispense various antibiotic disks on the Mueller–Hinton agar plate. Incubation was done overnight (20-24 hours) at 37oC in 5% CO2 and clearance zones read using a Vanier caliber. Antimicrobials tested included vancomycin (30µg, ≥17mm); erythromycin (15µg, ≥21mm); clindamycin (2µg, ≥19mm); oxacillin (1µg, ≥19mm) and ceftriaxone (1µg, ≥30mm). Results: Thirty nine (92.86%) Streptococcus pneumoniae isolates were susceptible to erythromycin; 39 (92.86%) were susceptible to vancomycin; eight (19.86%) Streptococcus pneumoniae isolates were susceptible to oxacillin, while 34 (80.95%) were non-susceptible; 40 (95.24%) isolates were susceptible to clindamycin; and 24 (57.86%) isolates were susceptible to ceftriaxone, while 18 (42.86%) were non-susceptible. Children who attended daycare centers exhibited a four-fold significant risk of being resistant to ceftriaxone. All antibiotics studied were effective against Streptococcus pneumoniae except oxacillin and ceftriaxone, which exhibited high levels of non-susceptibility. Attendance of daycare centers, consumption of antibiotics two weeks prior to collection of sample and subject age were shown to be associated with an increased risk of Streptococcus pneumoniae being resistant to penicillins and ceftriaxone. Conclusions: The law guiding use of antibiotics in Kenya should be meritoriously enforced to curb abuse of the available antibiotics.

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Serotype Distribution of Streptococcus pneumoniae causing Invasive Pneumococcal Disease at Bambino Gesù Children's Hospital in Rome: Is It Time for a New Vaccine?

Journal of Pediatric Infectious Diseases ◽

10.1055/s-0037-1615784 ◽

2018 ◽

Vol 14 (01) ◽

pp. 013-015

Author(s):

Elena Bozzola ◽

Andrzej Krzysztofiak ◽

Annausa Pantosti ◽

Laura Lancella ◽

Paola Bernaschi ◽

...

Keyword(s):

Streptococcus Pneumoniae ◽

Invasive Pneumococcal Disease ◽

Pneumococcal Disease ◽

Pediatric Age ◽

Immunization Programs ◽

Serotype Distribution ◽

Conjugate Vaccines ◽

Pneumococcal Conjugate Vaccines ◽

Children's Hospital ◽

The Impact

AbstractDiseases caused by Streptococcus pneumoniae are mostly preventable infections by current immunization programs. The objective of this study was to evaluate the impact of the introduction of the heptavalent and the 13-valent pneumococcal conjugate vaccines (PCV7 and PCV13) on the burden of pneumococcal disease and on the serotype distribution of S. pneumoniae causing invasive pneumococcal diseases (IPDs) in the pediatric age over a 5-year study (from January 2008 till December 2012). We observed a decrease in IPD rate in children after PCV13 introduction despite increases in nonvaccine serotype (NVS) rates in 2011. Nevertheless, from 2012, an increase in IPD rates due to non-PCV13 serotypes was observed.

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