Molecular phylogenomic study and the role of exogenous spermidine in the metabolic adjustment of endogenous polyamine in two rice cultivars under salt stress

Gene ◽  
2017 ◽  
Vol 609 ◽  
pp. 88-103 ◽  
Author(s):  
Jayita Saha ◽  
Kalyan Giri
AMB Express ◽  
2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Chunmiao Jiang ◽  
Gongbo Lv ◽  
Jinxin Ge ◽  
Bin He ◽  
Zhe Zhang ◽  
...  

AbstractGATA transcription factors (TFs) are involved in the regulation of growth processes and various environmental stresses. Although GATA TFs involved in abiotic stress in plants and some fungi have been analyzed, information regarding GATA TFs in Aspergillusoryzae is extremely poor. In this study, we identified and functionally characterized seven GATA proteins from A.oryzae 3.042 genome, including a novel AoSnf5 GATA TF with 20-residue between the Cys-X2-Cys motifs which was found in Aspergillus GATA TFs for the first time. Phylogenetic analysis indicated that these seven A. oryzae GATA TFs could be classified into six subgroups. Analysis of conserved motifs demonstrated that Aspergillus GATA TFs with similar motif compositions clustered in one subgroup, suggesting that they might possess similar genetic functions, further confirming the accuracy of the phylogenetic relationship. Furthermore, the expression patterns of seven A.oryzae GATA TFs under temperature and salt stresses indicated that A. oryzae GATA TFs were mainly responsive to high temperature and high salt stress. The protein–protein interaction network of A.oryzae GATA TFs revealed certain potentially interacting proteins. The comprehensive analysis of A. oryzae GATA TFs will be beneficial for understanding their biological function and evolutionary features and provide an important starting point to further understand the role of GATA TFs in the regulation of distinct environmental conditions in A.oryzae.


Author(s):  
Suhas Balasaheb Karle ◽  
Akankhya Guru ◽  
Padmanabh Dwivedi ◽  
Kundan Kumar
Keyword(s):  

Author(s):  
Yang Yu ◽  
Yanli Li ◽  
Zhenwei Yan ◽  
Xiangbo Duan
Keyword(s):  

2021 ◽  
Author(s):  
Ashok Saddhe Ankush ◽  
Ajay Kumar Mishra ◽  
Kumar Kundan

PLoS ONE ◽  
2018 ◽  
Vol 13 (7) ◽  
pp. e0200566 ◽  
Author(s):  
Chantal Ebel ◽  
Asma BenFeki ◽  
Moez Hanin ◽  
Roberto Solano ◽  
Andrea Chini

Author(s):  
Dinesh Kumar ◽  
Mohamad Al Hassan ◽  
Oscar Vicente ◽  
Veena Agrawal ◽  
Monica Boscaiu

Elucidating the mechanisms of abiotic stress tolerance in different species will help to develop more resistant plant varieties, contributing to improve agricultural production in a climate change scenario. Basic responses to salt stress, dependent on osmolyte accumulation and activation of antioxidant systems, have been studied in Nerium oleander, a xerophytic species widely used as ornamental. Salt strongly inhibited growth, but the plants survived one-month treatments with quite high NaCl concentrations, up to 800 mM, indicating the the species is relatively resistant to salt stress, in addition to drought. Levels of proline, glycine betaine and soluble sugars increased only slightly in the presence of salt; however, soluble sugar absolute contents were much higher than those of the other osmolytes, suggesting a functional role of these compounds in osmotic adjustment, and the presence of constitutive mechanisms of response to salt stress. High salinity generated oxidative stress in the plants, as shown by the increase of malondialdehyde levels. Antioxidant systems, enzymatic and non-enzymatic, are generally activated in response to salt stress; in oleander, they do not seem to include total phenolics or flavonoids, antioxidant compounds which did not accumulate significantly in salt-trated plants


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