scholarly journals First genome sequence of Aeromonas hydrophilia novel sequence type 658 strain isolated from livestock in South Africa

2021 ◽  
Vol 24 ◽  
pp. 175-177
Author(s):  
Yogandree Ramsamy ◽  
Daniel G. Amoako ◽  
Akebe Luther King Abia ◽  
Mushal Allam ◽  
Arshad Ismail ◽  
...  
Keyword(s):  
South Africa ◽  
Genome Sequence ◽  
Sequence Type ◽  
Aeromonas Hydrophilia

Genome sequence of a clinical Salmonella Enteritidis sequence type 11 strain from South Africa

2019 ◽  
Vol 19 ◽  
pp. 164-166 ◽  
Author(s):  
Roxanne Rule ◽  
Mohamed Said ◽  
Nontombi Mbelle ◽  
John Osei Sekyere
Keyword(s):  
South Africa ◽  
Genome Sequence ◽  
Salmonella Enteritidis ◽  
Sequence Type

scholarly journals Whole-Genome Sequence of a Novel Sequence Type 3136 Carbapenem-Resistant Klebsiella pneumoniae Strain Isolated from a Hospitalized Patient in Durban, South Africa

2018 ◽  
Vol 7 (23) ◽  
Author(s):  
Yogandree Ramsamy ◽  
Koleka P. Mlisana ◽  
Mushal Allam ◽  
Arshad Ismail ◽  
Ravesh Singh ◽  
...  
Keyword(s):  
South Africa ◽  
Klebsiella Pneumoniae ◽  
Virulence Factors ◽  
Genome Sequence ◽  
Sequence Type ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Content Type ◽  
Resistance Determinants ◽  
Carbapenem Resistant

Here, we describe the genome sequence of a novel sequence type 3136 (ST3136) Klebsiella pneumoniae strain isolated in South Africa. The 5,574,236-bp genome harbored 23 resistance determinants and 12 virulence factors that are of cardinal importance to infections.

scholarly journals Genome Sequence of a Novel Enterococcus faecalis Sequence Type 922 Strain Isolated from a Door Handle in the Intensive Care Unit of a District Hospital in Durban, South Africa

2019 ◽  
Vol 8 (35) ◽  
Author(s):  
Christiana O. Shobo ◽  
Daniel G. Amoako ◽  
Mushal Allam ◽  
Arshad Ismail ◽  
Sabiha Y. Essack ◽  
...  
Keyword(s):  
South Africa ◽  
Intensive Care Unit ◽  
Enterococcus Faecalis ◽  
Genome Sequence ◽  
District Hospital ◽  
Sequence Type ◽  
Content Type ◽  
Hospital Acquired Infections ◽  
Defense Systems ◽  
Hospital Acquired

Herein, we highlight the genome sequence of a novel Enterococcus faecalis sequence type 922 (ST922) strain isolated in South Africa. The 3,564,442-bp genome harbored defense systems, a resistome, a virulome, and genetic support, which is of importance to the control of hospital-acquired infections. The genomics of Enterococcus faecalis yields greater understanding into its pathogenesis.

scholarly journals Draft Genome Sequence of Neisseria gonorrhoeae Sequence Type 1407, a Multidrug-Resistant Clinical Isolate

2015 ◽  
Vol 3 (4) ◽  
Author(s):  
A. Anselmo ◽  
A. Ciammaruconi ◽  
A. Carannante ◽  
A. Neri ◽  
C. Fazio ◽  
...  
Keyword(s):  
Neisseria Gonorrhoeae ◽  
Clinical Isolate ◽  
Genome Sequence ◽  
Draft Genome ◽  
Multidrug Resistant ◽  
Sequence Type ◽  
Draft Genome Sequence

scholarly journals Draft Genome Sequence of the Earliest Cronobacter sakazakii Sequence Type 4 Strain, NCIMB 8272

2013 ◽  
Vol 1 (5) ◽  
Author(s):  
N. Masood ◽  
K. Moore ◽  
A. Farbos ◽  
S. Hariri ◽  
K. Paszkiewicz ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Sequence Type ◽  
Draft Genome Sequence ◽  
Cronobacter Sakazakii

scholarly journals Complete Genome Sequence of a Multidrug-Resistant Acinetobacter baumannii Isolate Obtained from a Mexican Hospital (Sequence Type 422)

2016 ◽  
Vol 4 (3) ◽  
Author(s):  
Semiramis Castro-Jaimes ◽  
Abraham David Salgado-Camargo ◽  
Lucía Graña-Miraglia ◽  
Luis Lozano ◽  
Paola Bocanegra-Ibarias ◽  
...  
Keyword(s):  
Intensive Care ◽  
Acinetobacter Baumannii ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Hematologic Malignancies ◽  
Multidrug Resistant ◽  
Sequence Type ◽  
Nosocomial Pathogen ◽  
Baumannii Isolate

Acinetobacter baumannii has emerged as a dangerous nosocomial pathogen, particularly for severely ill patients in intensive care units and patients with hematologic malignancies. Here, we present the complete genome sequence of a multidrug-resistant A. baumannii isolate, recovered from a Mexican hospital and classified as sequence type 422 according to the multilocus sequence typing Pasteur scheme.

scholarly journals Complete Genome Sequence of Serotype III Streptococcus agalactiae Sequence Type 17 Strain 874391

2017 ◽  
Vol 5 (42) ◽  
Author(s):  
Matthew J. Sullivan ◽  
Brian M. Forde ◽  
Darren W. Prince ◽  
Deepak S. Ipe ◽  
Nouri L. Ben Zakour ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Streptococcus Agalactiae ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Historical Context ◽  
Invasive Disease ◽  
Sequence Type ◽  
Content Type ◽  
Disproportionate Number

ABSTRACT Here we report the complete genome sequence of Streptococcus agalactiae strain 874391. This serotype III isolate is a member of the hypervirulent sequence type 17 (ST-17) lineage that causes a disproportionate number of cases of invasive disease in humans and mammals. A brief historical context of the strain is discussed.

scholarly journals Complete Genome Sequence of Pseudomonas aeruginosa K34-7, a Carbapenem-Resistant Isolate of the High-Risk Sequence Type 233

2018 ◽  
Vol 7 (4) ◽  
Author(s):  
George Taiaroa ◽  
Ørjan Samuelsen ◽  
Tom Kristensen ◽  
Ole Andreas Løchen Økstad ◽  
Adam Heikal
Keyword(s):  
Pseudomonas Aeruginosa ◽  
High Risk ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Sequence Type ◽  
Resistant Isolate ◽  
Content Type ◽  
Carbapenem Resistant ◽  
New Antibiotics

Carbapenem-resistant Pseudomonas aeruginosa is defined as a “critical” priority pathogen for the development of new antibiotics. Here we report the complete genome sequence of an extensively drug-resistant, Verona integron-encoded metallo-β-lactamase-expressing isolate belonging to the high-risk sequence type 233.

scholarly journals Complete Genome Sequence of Systemically Disseminated Sequence Type 8 Staphylococcal Cassette Chromosome mec Type IVl Community-Acquired Methicillin-Resistant Staphylococcus aureus

2017 ◽  
Vol 5 (35) ◽  
Author(s):  
Junzo Hisatsune ◽  
Hideharu Hagiya ◽  
Sumiko Shiota ◽  
Motoyuki Sugai
Keyword(s):  
Staphylococcus Aureus ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Methicillin Resistant Staphylococcus Aureus ◽  
Sequence Type ◽  
Methicillin Resistant ◽  
Content Type ◽  
Staphylococcal Cassette Chromosome ◽  
Epidermal Cell Differentiation

ABSTRACT Staphylococcus aureus JH4899, a community-acquired methicillin-resistant Staphylococcus aureus (CA-MRSA) isolate collected from a patient with systematically disseminated infection, is classified as sequence type 8 and carries the staphylococcal cassette chromosome mec type IVl (SCCmecIVl). It produces TSST-1, SEC, a newly discovered enterotoxin (SE1), and epidermal cell differentiation inhibitor A (EDIN-A). Here, we present the complete genome sequence of the chromosome and a plasmid harboring the se1 and ednA genes.

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