Color pattern on the Carboniferous bivalve Streblochondria? Newell

1988 ◽  
Vol 62 (3) ◽  
pp. 439-441 ◽  
Author(s):  
Royal H. Mapes ◽  
E. J. Benstock
Keyword(s):  
Group Analysis ◽  
Color Pattern ◽  
Color Patterns ◽  
Evolutionary Selection ◽  
Pattern Distribution ◽  
Selection For

This report describes a previously unknown chevron color pattern preserved on the Carboniferous bivalve Streblochondria? and discusses the significance of color patterns on Paleozoic bivalves as a group. Analysis of Paleozoic color pattern distribution suggests that the appearance of predators in the Devonian may have influenced preferential evolutionary selection for the development of color patterns in bivalves.

Functional significance of preserved color patterns of mollusks from the Gosport Sand (Eocene) of Alabama

1988 ◽  
Vol 62 (01) ◽  
pp. 83-87 ◽  
Author(s):  
Patricia H. Kelley ◽  
Charles T. Swann
Keyword(s):  
Functional Morphology ◽  
Functional Significance ◽  
Intraspecific Variability ◽  
Color Pattern ◽  
Color Patterns ◽  
Historical Factors ◽  
Life Mode ◽  
Molluscan Fauna ◽  
Excellent Preservation ◽  
Architectural Constraints

The excellent preservation of the molluscan fauna from the Gosport Sand (Eocene) at Little Stave Creek, Alabama, has made it possible to describe the preserved color patterns of 15 species. In this study the functional significance of these color patterns is tested in the context of the current adaptationist controversy. The pigment of the color pattern is thought to be a result of metabolic waste disposal. Therefore, the presence of the pigment is functional, although the patterns formed by the pigment may or may not have been adaptive. In this investigation the criteria proposed by Seilacher (1972) for testing the functionality of color patterns were applied to the Gosport fauna and the results compared with life mode as interpreted from knowledge of extant relatives and functional morphology. Using Seilacher's criteria of little ontogenetic and intraspecific variability, the color patterns appear to have been functional. However, the functional morphology studies indicate an infaunal life mode which would preclude functional color patterns. Particular color patterns are instead interpreted to be the result of historical factors, such as multiple adaptive peaks or random fixation of alleles, or of architectural constraints including possibly pleiotropy or allometry. The low variability of color patterns, which was noted within species and genera, suggests that color patterns may also serve a useful taxonomic purpose.

Evolutionary selection for travel agencies under COVID-19 adversity through the lens of life history theory

2021 ◽  
Vol 38 (9) ◽  
pp. 917-934
Author(s):  
GuoQiongIvanka Huang ◽  
Shuru Zhong ◽  
IpKin Anthony Wong ◽  
Zhiwei (CJ) Lin
Keyword(s):  
Life History ◽  
Life History Theory ◽  
Evolutionary Selection ◽  
Travel Agencies ◽  
Selection For

scholarly journals Butterfly Mimicry Polymorphisms Highlight Phylogenetic Limits of Gene Reuse in the Evolution of Diverse Adaptations

2019 ◽  
Vol 36 (12) ◽  
pp. 2842-2853 ◽  
Author(s):  
Nicholas W VanKuren ◽  
Darli Massardo ◽  
Sumitha Nallu ◽  
Marcus R Kronforst
Keyword(s):  
Phylogenetic Relationship ◽  
Gene Networks ◽  
Genetic Basis ◽  
Color Pattern ◽  
Butterfly Wing ◽  
Color Patterns ◽  
Developmental Gene ◽  
Genome Region ◽  
Correlated Factors ◽  
Unique Genes

Abstract Some genes have repeatedly been found to control diverse adaptations in a wide variety of organisms. Such gene reuse reveals not only the diversity of phenotypes these unique genes control but also the composition of developmental gene networks and the genetic routes available to and taken by organisms during adaptation. However, the causes of gene reuse remain unclear. A small number of large-effect Mendelian loci control a huge diversity of mimetic butterfly wing color patterns, but reasons for their reuse are difficult to identify because the genetic basis of mimicry has primarily been studied in two systems with correlated factors: female-limited Batesian mimicry in Papilio swallowtails (Papilionidae) and non-sex-limited Müllerian mimicry in Heliconius longwings (Nymphalidae). Here, we break the correlation between phylogenetic relationship and sex-limited mimicry by identifying loci controlling female-limited mimicry polymorphism Hypolimnas misippus (Nymphalidae) and non-sex-limited mimicry polymorphism in Papilio clytia (Papilionidae). The Papilio clytia polymorphism is controlled by the genome region containing the gene cortex, the classic P supergene in Heliconius numata, and loci controlling color pattern variation across Lepidoptera. In contrast, female-limited mimicry polymorphism in Hypolimnas misippus is associated with a locus not previously implicated in color patterning. Thus, although many species repeatedly converged on cortex and its neighboring genes over 120 My of evolution of diverse color patterns, female-limited mimicry polymorphisms each evolved using a different gene. Our results support conclusions that gene reuse occurs mainly within ∼10 My and highlight the puzzling diversity of genes controlling seemingly complex female-limited mimicry polymorphisms.

Stability indicatrices of nonnegative matrices and some of their applications in problems of biology and epidemiology

2019 ◽  
Vol 34 (5) ◽  
pp. 269-275
Author(s):  
Valery N. Razzhevaikin
Keyword(s):  
Nonnegative Matrix ◽  
Host Population ◽  
Nonnegative Matrices ◽  
Biological Communities ◽  
Evolutionary Selection ◽  
Evolutionary Optimality ◽  
Selection For ◽  
The Stability ◽  
Series Of Functions

Abstract The method of constructing a stability indicatrix of a nonnegative matrix having the form of a polynomial of its coefficients is presented. The algorithm of construction and conditions of its applicability are specified. The applicability of the algorithm is illustrated on examples of constructing the stability indicatrix for a series of functions widely used in simulation of the dynamics of discrete biological communities, for solving evolutionary optimality problems arising in biological problems of evolutionary selection, for identification of the conditions of the pandemic in a distributed host population.

scholarly journals Evidence of evolutionary selection for cotranslational folding

2017 ◽  
Vol 114 (43) ◽  
pp. 11434-11439 ◽  
Author(s):  
William M. Jacobs ◽  
Eugene I. Shakhnovich
Keyword(s):  
Self Assembly ◽  
Evolutionary Selection ◽  
Fitness Effects ◽  
Open Questions ◽  
Genome Wide ◽  
A Genome ◽  
Evolutionarily Conserved ◽  
Domain Boundaries ◽  
Cotranslational Folding ◽  
Selection For

Recent experiments and simulations have demonstrated that proteins can fold on the ribosome. However, the extent and generality of fitness effects resulting from cotranslational folding remain open questions. Here we report a genome-wide analysis that uncovers evidence of evolutionary selection for cotranslational folding. We describe a robust statistical approach to identify loci within genes that are both significantly enriched in slowly translated codons and evolutionarily conserved. Surprisingly, we find that domain boundaries can explain only a small fraction of these conserved loci. Instead, we propose that regions enriched in slowly translated codons are associated with cotranslational folding intermediates, which may be smaller than a single domain. We show that the intermediates predicted by a native-centric model of cotranslational folding account for the majority of these loci across more than 500 Escherichia coli proteins. By making a direct connection to protein folding, this analysis provides strong evidence that many synonymous substitutions have been selected to optimize translation rates at specific locations within genes. More generally, our results indicate that kinetics, and not just thermodynamics, can significantly alter the efficiency of self-assembly in a biological context.

Measuring Perceptual Distance of Organismal Color Pattern using the Features of Deep Neural Networks

2019 ◽  
Author(s):  
Drew C. Wham ◽  
Briana Ezray ◽  
Heather M. Hines
Keyword(s):  
Deep Neural Networks ◽  
Color Pattern ◽  
Color Contrast ◽  
Biological Processes ◽  
Color Patterns ◽  
Biologically Relevant ◽  
Perceptual Distance ◽  
Data Formats ◽  
Wide Range ◽  
Study Designs

ABSTRACTA wide range of research relies upon the accurate and repeatable measurement of the degree to which organisms resemble one another. Here, we present an unsupervised workflow for analyzing the relationships between organismal color patterns. This workflow utilizes several recent advancements in deep learning based computer vision techniques to calculate perceptual distance. We validate this approach using previously published datasets surrounding diverse applications of color pattern analysis including mimicry, population differentiation, heritability, and development. We demonstrate that our approach is able to reproduce the biologically relevant color pattern relationships originally reported in these studies. Importantly, these results are achieved without any task-specific training. In many cases, we were able to reproduce findings directly from original photographs or plates with minimum standardization, avoiding the need for intermediate representations such as a cartoonized images or trait matrices. We then present two artificial datasets designed to highlight how this approach handles aspects of color patterns, such as changes in pattern location and the perception of color contrast. These results suggest that this approach will generalize well to support the study of a wide range of biological processes in a diverse set of taxa while also accommodating a variety of data formats, preprocessing techniques, and study designs.

scholarly journals Long-Range Effects of Wing Physical Damage and Distortion on Eyespot Color Patterns in the Hindwing of the Blue Pansy Butterfly Junonia orithya

Insects ◽  
2018 ◽  
Vol 9 (4) ◽  
pp. 195 ◽  
Author(s):  
Joji Otaki
Keyword(s):  
Long Range ◽  
Color Pattern ◽  
Color Patterns ◽  
Physical Damage ◽  
Damage Site ◽  
Disk Size ◽  
Close Proximity ◽  
Butterfly Wings ◽  
Pattern Determination ◽  
Background Area

Butterfly eyespot color patterns have been studied using several different approaches, including applications of physical damage to the forewing. Here, damage and distortion experiments were performed, focusing on the hindwing eyespots of the blue pansy butterfly Junonia orithya. Physical puncture damage with a needle at the center of the eyespot reduced the eyespot size. Damage at the eyespot outer rings not only deformed the entire eyespot, but also diminished the eyespot core disk size, despite the distance from the damage site to the core disk. When damage was inflicted near the eyespot, the eyespot was drawn toward the damage site. The induction of an ectopic eyespot-like structure and its fusion with the innate eyespots were observed when damage was inflicted in the background area. When a small stainless ball was placed in close proximity to the eyespot using the forewing-lift method, the eyespot deformed toward the ball. Taken together, physical damage and distortion elicited long-range inhibitory, drawing (attracting), and inducing effects, suggesting that the innate and induced morphogenic signals travel long distances and interact with each other. These results are consistent with the distortion hypothesis, positing that physical distortions of wing tissue contribute to color pattern determination in butterfly wings.

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