Functional significance of preserved color patterns of mollusks from the Gosport Sand (Eocene) of Alabama

1988 ◽  
Vol 62 (01) ◽  
pp. 83-87 ◽  
Author(s):  
Patricia H. Kelley ◽  
Charles T. Swann
Keyword(s):  
Functional Morphology ◽  
Functional Significance ◽  
Intraspecific Variability ◽  
Color Pattern ◽  
Color Patterns ◽  
Historical Factors ◽  
Life Mode ◽  
Molluscan Fauna ◽  
Excellent Preservation ◽  
Architectural Constraints

The excellent preservation of the molluscan fauna from the Gosport Sand (Eocene) at Little Stave Creek, Alabama, has made it possible to describe the preserved color patterns of 15 species. In this study the functional significance of these color patterns is tested in the context of the current adaptationist controversy. The pigment of the color pattern is thought to be a result of metabolic waste disposal. Therefore, the presence of the pigment is functional, although the patterns formed by the pigment may or may not have been adaptive. In this investigation the criteria proposed by Seilacher (1972) for testing the functionality of color patterns were applied to the Gosport fauna and the results compared with life mode as interpreted from knowledge of extant relatives and functional morphology. Using Seilacher's criteria of little ontogenetic and intraspecific variability, the color patterns appear to have been functional. However, the functional morphology studies indicate an infaunal life mode which would preclude functional color patterns. Particular color patterns are instead interpreted to be the result of historical factors, such as multiple adaptive peaks or random fixation of alleles, or of architectural constraints including possibly pleiotropy or allometry. The low variability of color patterns, which was noted within species and genera, suggests that color patterns may also serve a useful taxonomic purpose.

Functional significance of preserved color patterns of mollusks from the Gosport Sand (Eocene) of Alabama

1988 ◽  
Vol 62 (1) ◽  
pp. 83-87 ◽  
Author(s):  
Patricia H. Kelley ◽  
Charles T. Swann
Keyword(s):  
Functional Morphology ◽  
Functional Significance ◽  
Intraspecific Variability ◽  
Color Pattern ◽  
Color Patterns ◽  
Historical Factors ◽  
Life Mode ◽  
Molluscan Fauna ◽  
Excellent Preservation ◽  
Architectural Constraints

The excellent preservation of the molluscan fauna from the Gosport Sand (Eocene) at Little Stave Creek, Alabama, has made it possible to describe the preserved color patterns of 15 species. In this study the functional significance of these color patterns is tested in the context of the current adaptationist controversy. The pigment of the color pattern is thought to be a result of metabolic waste disposal. Therefore, the presence of the pigment is functional, although the patterns formed by the pigment may or may not have been adaptive. In this investigation the criteria proposed by Seilacher (1972) for testing the functionality of color patterns were applied to the Gosport fauna and the results compared with life mode as interpreted from knowledge of extant relatives and functional morphology. Using Seilacher's criteria of little ontogenetic and intraspecific variability, the color patterns appear to have been functional. However, the functional morphology studies indicate an infaunal life mode which would preclude functional color patterns. Particular color patterns are instead interpreted to be the result of historical factors, such as multiple adaptive peaks or random fixation of alleles, or of architectural constraints including possibly pleiotropy or allometry. The low variability of color patterns, which was noted within species and genera, suggests that color patterns may also serve a useful taxonomic purpose.

scholarly journals Butterfly Mimicry Polymorphisms Highlight Phylogenetic Limits of Gene Reuse in the Evolution of Diverse Adaptations

2019 ◽  
Vol 36 (12) ◽  
pp. 2842-2853 ◽  
Author(s):  
Nicholas W VanKuren ◽  
Darli Massardo ◽  
Sumitha Nallu ◽  
Marcus R Kronforst
Keyword(s):  
Phylogenetic Relationship ◽  
Gene Networks ◽  
Genetic Basis ◽  
Color Pattern ◽  
Butterfly Wing ◽  
Color Patterns ◽  
Developmental Gene ◽  
Genome Region ◽  
Correlated Factors ◽  
Unique Genes

Abstract Some genes have repeatedly been found to control diverse adaptations in a wide variety of organisms. Such gene reuse reveals not only the diversity of phenotypes these unique genes control but also the composition of developmental gene networks and the genetic routes available to and taken by organisms during adaptation. However, the causes of gene reuse remain unclear. A small number of large-effect Mendelian loci control a huge diversity of mimetic butterfly wing color patterns, but reasons for their reuse are difficult to identify because the genetic basis of mimicry has primarily been studied in two systems with correlated factors: female-limited Batesian mimicry in Papilio swallowtails (Papilionidae) and non-sex-limited Müllerian mimicry in Heliconius longwings (Nymphalidae). Here, we break the correlation between phylogenetic relationship and sex-limited mimicry by identifying loci controlling female-limited mimicry polymorphism Hypolimnas misippus (Nymphalidae) and non-sex-limited mimicry polymorphism in Papilio clytia (Papilionidae). The Papilio clytia polymorphism is controlled by the genome region containing the gene cortex, the classic P supergene in Heliconius numata, and loci controlling color pattern variation across Lepidoptera. In contrast, female-limited mimicry polymorphism in Hypolimnas misippus is associated with a locus not previously implicated in color patterning. Thus, although many species repeatedly converged on cortex and its neighboring genes over 120 My of evolution of diverse color patterns, female-limited mimicry polymorphisms each evolved using a different gene. Our results support conclusions that gene reuse occurs mainly within ∼10 My and highlight the puzzling diversity of genes controlling seemingly complex female-limited mimicry polymorphisms.

Measuring Perceptual Distance of Organismal Color Pattern using the Features of Deep Neural Networks

2019 ◽  
Author(s):  
Drew C. Wham ◽  
Briana Ezray ◽  
Heather M. Hines
Keyword(s):  
Deep Neural Networks ◽  
Color Pattern ◽  
Color Contrast ◽  
Biological Processes ◽  
Color Patterns ◽  
Biologically Relevant ◽  
Perceptual Distance ◽  
Data Formats ◽  
Wide Range ◽  
Study Designs

ABSTRACTA wide range of research relies upon the accurate and repeatable measurement of the degree to which organisms resemble one another. Here, we present an unsupervised workflow for analyzing the relationships between organismal color patterns. This workflow utilizes several recent advancements in deep learning based computer vision techniques to calculate perceptual distance. We validate this approach using previously published datasets surrounding diverse applications of color pattern analysis including mimicry, population differentiation, heritability, and development. We demonstrate that our approach is able to reproduce the biologically relevant color pattern relationships originally reported in these studies. Importantly, these results are achieved without any task-specific training. In many cases, we were able to reproduce findings directly from original photographs or plates with minimum standardization, avoiding the need for intermediate representations such as a cartoonized images or trait matrices. We then present two artificial datasets designed to highlight how this approach handles aspects of color patterns, such as changes in pattern location and the perception of color contrast. These results suggest that this approach will generalize well to support the study of a wide range of biological processes in a diverse set of taxa while also accommodating a variety of data formats, preprocessing techniques, and study designs.

scholarly journals Long-Range Effects of Wing Physical Damage and Distortion on Eyespot Color Patterns in the Hindwing of the Blue Pansy Butterfly Junonia orithya

Insects ◽  
2018 ◽  
Vol 9 (4) ◽  
pp. 195 ◽  
Author(s):  
Joji Otaki
Keyword(s):  
Long Range ◽  
Color Pattern ◽  
Color Patterns ◽  
Physical Damage ◽  
Damage Site ◽  
Disk Size ◽  
Close Proximity ◽  
Butterfly Wings ◽  
Pattern Determination ◽  
Background Area

Butterfly eyespot color patterns have been studied using several different approaches, including applications of physical damage to the forewing. Here, damage and distortion experiments were performed, focusing on the hindwing eyespots of the blue pansy butterfly Junonia orithya. Physical puncture damage with a needle at the center of the eyespot reduced the eyespot size. Damage at the eyespot outer rings not only deformed the entire eyespot, but also diminished the eyespot core disk size, despite the distance from the damage site to the core disk. When damage was inflicted near the eyespot, the eyespot was drawn toward the damage site. The induction of an ectopic eyespot-like structure and its fusion with the innate eyespots were observed when damage was inflicted in the background area. When a small stainless ball was placed in close proximity to the eyespot using the forewing-lift method, the eyespot deformed toward the ball. Taken together, physical damage and distortion elicited long-range inhibitory, drawing (attracting), and inducing effects, suggesting that the innate and induced morphogenic signals travel long distances and interact with each other. These results are consistent with the distortion hypothesis, positing that physical distortions of wing tissue contribute to color pattern determination in butterfly wings.

Preserved color pattern of a phylloceratid ammonoid from the Jurassic Chari Formation, Kutch, India, and its functional significance

1993 ◽  
Vol 67 (1) ◽  
pp. 140-143 ◽  
Author(s):  
Subhendu Bardhan ◽  
Sudipta K. Jana ◽  
Kalyanbrata Datta
Keyword(s):  
Functional Significance ◽  
Color Pattern ◽  
Middle Cambrian ◽  
Primary Color ◽  
Rare Phenomenon

Preservation of pristine pigmentation in fossil shells is a rare phenomenon (Teichert, 1964) and fossilization accompanied by recrystallization often renders the primary color bands indiscernible (Shrock and Twenhofel, 1953). Nevertheless, there are reports on color markings in fossil shells ranging from the Middle Cambrian to Holocene (Hoare, 1978; Mapes and Hoare, 1987; Kobluk and Mapes, 1989).

scholarly journals A conserved paint box underlies color pattern diversity in Estrildid finches

2021 ◽  
Author(s):  
Magdalena Hidalgo ◽  
Camille Curantz ◽  
Nicole Quenech’Du ◽  
Thanh-Lan Gluckman ◽  
Julia Neguer ◽  
...  
Keyword(s):  
Color Pattern ◽  
Color Patterns ◽  
Color Distribution ◽  
Comparative Analyses ◽  
Developmental Mechanisms ◽  
Pattern Diversity ◽  
Molecular Map ◽  
Small Set ◽  
Molecular Landscape

AbstractMany animals exhibit typical color patterns that have been linked to key adaptive functions, yet the developmental mechanisms establishing these crucial designs remain unclear. Here, we surveyed color distribution in the plumage across a large number of passerine finches. Despite extreme apparent pattern diversity, we identified a small set of conserved color regions whose combinatory association can explain all observed patterns. We found these domains are instructed by early embryonic landmarks, and through profiling and comparative analyses produced a molecular map marking putative color domains in the developing skin. This revealed cryptic pre-patterning common to differently colored species, uncovering a simple molecular landscape underlying extensive color pattern variation.

scholarly journals Patternize: An R Package For Quantifying Color Pattern Variation

2017 ◽  
Author(s):  
Steven M. Van Belleghem ◽  
Riccardo Papa ◽  
Humberto Ortiz-Zuazaga ◽  
Frederik Hendrickx ◽  
Chris Jiggins ◽  
...  
Keyword(s):  
Association Studies ◽  
Genetic Association Studies ◽  
Image Data ◽  
Principal Component ◽  
R Package ◽  
Color Pattern ◽  
Color Patterns ◽  
Wide Range ◽  
Potential Applications ◽  
Population Comparisons

The use of image data to quantify, study and compare variation in the colors and patterns of organisms requires the alignment of images to establish homology, followed by color-based segmentation of images. Here we describe an R package for image alignment and segmentation that has applications to quantify color patterns in a wide range of organisms. patternize is an R package that quantifies variation in color patterns obtained from image data. patternize first defines homology between pattern positions across specimens either through manually placed homologous landmarks or automated image registration. Pattern identification is performed by categorizing the distribution of colors using an RGB threshold, k-means clustering or watershed transformation. We demonstrate that patternize can be used for quantification of the color patterns in a variety of organisms by analyzing image data for butterflies, guppies, spiders and salamanders. Image data can be compared between sets of specimens, visualized as heatmaps and analyzed using principal component analysis (PCA). patternize has potential applications for fine scale quantification of color pattern phenotypes in population comparisons, genetic association studies and investigating the basis of color pattern variation across a wide range of organisms.

scholarly journals Estimates of selection and gene flow from measures of cline width and linkage disequilibrium in heliconius hybrid zones.

Genetics ◽  
1990 ◽  
Vol 124 (4) ◽  
pp. 921-936 ◽  
Author(s):  
J Mallet ◽  
N Barton ◽  
G Lamas ◽  
J Santisteban ◽  
M Muedas ◽  
...  
Keyword(s):  
Gene Flow ◽  
Hybrid Zone ◽  
Color Pattern ◽  
Butterfly Species ◽  
Hybrid Zones ◽  
Square Root ◽  
Color Patterns ◽  
Long Distance ◽  
Locus Selection ◽  
Cline Width

Abstract Hybrid zones can yield estimates of natural selection and gene flow. The width of a cline in gene frequency is approximately proportional to gene flow (sigma) divided by the square root of per-locus selection (square root of s). Gene flow also causes gametic correlations (linkage disequilibria) between genes that differ across hybrid zones. Correlations are stronger when the hybrid zone is narrow, and rise to a maximum roughly equal to s. Thus cline width and gametic correlations combine to give estimates of gene flow and selection. These indirect measures of sigma and s are especially useful because they can be made from collections, and require no field experiments. The method was applied to hybrid zones between color pattern races in a pair of Peruvian Heliconius butterfly species. The species are Müllerian mimics of one another, and both show the same changes in warning color pattern across their respective hybrid zones. The expectations of cline width and gametic correlation were generated using simulations of clines stabilized by strong frequency-dependent selection. In the hybrid zone in Heliconius erato, clines at three major color pattern loci were between 8.5 and 10.2 km wide, and the pairwise gametic correlations peaked at R approximately 0.35. These measures suggest that s approximately 0.23 per locus, and that sigma approximately 2.6 km. In erato, the shapes of the clines agreed with that expected on the basis of dominance. Heliconius melpomene has a nearly coincident hybrid zone. In this species, cline widths at four major color pattern loci varied between 11.7 and 13.4 km. Pairwise gametic correlations peaked near R approximately 1.00 for tightly linked genes, and at R approximately 0.40 for unlinked genes, giving s approximately 0.25 per locus and sigma approximately 3.7 km. In melpomene, cline shapes did not perfectly fit theoretical shapes based on dominance; this deviation might be explained by long-distance migration and/or strong epistasis. Compared with erato, sample sizes in melpomene are lower and the genetics of its color patterns are less well understood. In spite of these problems, selection and gene flow are clearly of the same order of magnitude in the two species. The relatively high per locus selection coefficients agree with "major gene" theories for the evolution of Müllerian mimicry, but the genetic architecture of the color patterns does not. These results show that the genetics and evolution of mimicry are still only sketchily understood.

scholarly journals Redescription of Panaqolus purusiensis(LaMonte, 1935) (Siluriformes: Loricariidae) with identification key to the species of the genus

2014 ◽  
Vol 12 (1) ◽  
pp. 61-70 ◽  
Author(s):  
Christian Andreas Cramer
Keyword(s):  
Color Pattern ◽  
The Body ◽  
Similar Species ◽  
Single Specimen ◽  
Color Patterns ◽  
Body Proportions ◽  
Size Dependent ◽  
New Material ◽  
Distinct Color ◽  
Dark Body

Despite Panaqolus purusiensis being described nearly 80 years ago, very little is known about it. The taxon was described based on a single specimen. Researching collection catalogues has revealed two more specimens that were caught together along with the holotype but had subsequently been deposited in different museums. Recent collections, including one from the type locality, have made more specimens available. Examination of this new material reveals that this species has three distinct color patterns that are size dependent. Specimens with standard length (SL) less than 30 mm show a coloration common among various species of Panaqolus consisting of regular bands on the body, fins and head. Specimens from 30-90 mm SL have a specific color pattern with thinner bands and those larger than 90 mm SL have a uniformly dark body with only the fins continuing to show bands. The most similar species are P. changae, P. gnomus, P. maccus, and P. nocturnus.The first three can easily be distinguished by their coloration and by body proportions. Specimens of P. nocturnusof more than 90 mm SL however are nearly indistinguishable from P. purusiensisof the same size, making identification difficult.

scholarly journals Wing pattern diversity in Brassolini butterflies (Nymphalidae, Satyrinae)

2013 ◽  
Vol 13 (3) ◽  
pp. 154-180 ◽  
Author(s):  
Carla Maria Penz ◽  
Neda Mohammadi
Keyword(s):  
Hind Wing ◽  
Dorsal Surface ◽  
Color Pattern ◽  
Specific Pattern ◽  
Wing Pattern ◽  
Background Color ◽  
Color Patterns ◽  
Ground Plan ◽  
Pattern Diversity ◽  
Nymphalid Ground Plan

This study describes and compares the diverse dorsal and ventral wing color patterns of Brassolini butterflies. Thirty-three species are illustrated, where pattern elements of the nymphalid ground plan are labeled in color. In general, a larger number of pattern elements can be identified on the ventral than on the dorsal surface of both wings, and the forewing has a larger number of discernible pattern elements than the hind wing. The dorsal elements are broad, diffuse, and more difficult to identify against the typically brown brassoline wing background color. Species with a light colored dorsal background served as a guide for our proposal that fewer pattern elements are present dorsally, particularly on the hind wing. Colorful bands or markings generally present on the dorsal surface seem to be associated with specific pattern elements and have correspondence to the ventral pattern. We refer to these as trailing bands, and they constitute a predominant feature of the brassoline dorsal coloration. We propose a subordinate groundplan for brassolines and interpret some of the ventral pattern variation in light of their phylogeny. Dorsal color pattern variation that leads to sexual dimorphism and mimetic resemblance are also discussed.

Sign in / Sign up

Export Citation Format

Share Document