Estimates of genetic parameters for growth traits of Gobra cattle

1998 ◽  
Vol 66 (2) ◽  
pp. 349-355 ◽  
Author(s):  
M. Diop ◽  
L. D. Van Vleck
Keyword(s):  
Animal Models ◽  
Maternal Effects ◽  
Genetic Parameters ◽  
Growth Traits ◽  
Random Effect ◽  
Random Effect Model ◽  
Genetic Effects ◽  
Breeding Value ◽  
Effect Model ◽  
Additive Genetic Effects

AbstractEstimates of (co)variance components and genetic parameters were obtained for birth (no. = 3909), weaning (no. = 3425), yearling (no. = 2763), and final weight (no. = 2142) for Gobra cattle at the Centre de Recherches Zootechniques de Dahra (Senegal), using single trait animal models. Data were analysed by restricted maximum likelihood. Four different animal models were fitted for each trait. Model 1 considered the animal as the only random effect. Model 2 included in addition to the additive direct effect of the animal, the environmental effect due to the dam. Model 3 added the maternal additive genetic effects and allowed a covariance between the direct and maternal genetic effects. Model 4 fitted both maternal genetic and permanent environmental effects. Inclusion of both types of maternal effects (genetic and environmental) provided a better fit for birth and weaning weights than models with one maternal effect only. For yearling and final weights, the improvement was not significant. Important maternal effects werefound for all traits. Estimates of direct heritabilities were substantially higher when maternal effects were ignored. Estimates of direct and maternal heritabilities with model 4 were 0·07 (s.e. 0·03) and 0·04 (s.e. 0·02), 0·20 (s.e. 0·05) and 0·21 (s.e. 0.05), 0·24 (s.e. 0·07) and 0·21 (s.e. 0·06), and 0·14 (s.e. 0·06) and 0.16 (s.e. 0·06) for birth, weaning, yearling and final weights, respectively. Correlations between direct and maternal genetic effects were negative for all traits, and large for weaning and yearling weights with estimates of -0·61 (s.e. 0·33) and -0·50 (s.e. 0·31), respectively. There was a significant positive linear phenotypic trend for weaning and yearling weights. Linear trends for additive direct and maternal breeding values were not significant for any trait except maternal breeding value for yearling weight.

scholarly journals Estimates of direct, maternal and grandmaternal genetic effects for growth traits in Gobra cattle

1999 ◽  
Vol 22 (3) ◽  
pp. 363-367 ◽  
Author(s):  
M. Diop ◽  
J. Dodenhoff ◽  
L.D. Van Vleck
Keyword(s):  
Animal Models ◽  
Genetic Correlation ◽  
Random Effects ◽  
Maternal Effects ◽  
Environmental Effects ◽  
Genetic Parameters ◽  
Growth Traits ◽  
Genetic Effects ◽  
Average Information

Estimates of genetic parameters for birth (N = 3909), weaning (N = 3425), yearling (N = 2764) and final (N = 2144) weights were obtained from the records of Gobra cattle collected at the Centre de Recherches Zootechniques de Dahra, Senegal. Three animal models were fitted to obtain estimates by REML using an average information (AI) approach. Model 1 considered random direct, maternal genetic and maternal permanent environmental effects. In model 2, a general grandmaternal effect was added to the random effects considered in model 1, and in model 3, the general grandmaternal effect was divided into grandmaternal genetic and grandmaternal permanent environmental effects. All models allowed covariances among genetic effects. The inclusion of grandmaternal effects in models 2 and 3 did not change the estimates of the genetic parameters compared to model 1. Variances attributable to grandmaternal effects became negative and were set close to zero, except for yearling weight for which grandmaternal heritability was 0.03 ± 0.03. The estimates for direct and maternal heritabilities were, respectively, 0.08 ± 0.03 and 0.03 ± 0.02 for birth, 0.20 ± 0.05 and 0.21 ± 0.05 for weaning, 0.26 ± 0.07 and 0.16 ± 0.07 for yearling and 0.14 ± 0.06 and 0.16 ± 0.06 for final weights. The estimates of the genetic correlation between direct and maternal effects for birth, weaning, yearling and final weights were -0.17 ± 0.40, -0.58 ± 0.32, -0.52 ± 0.34 and -0.34 ± 0.37, respectively. For yearling weight with grandmaternal heritability estimated to be only 0.03, model 3 gave estimates of the genetic correlation between direct and grandmaternal effects and between maternal and grandmaternal effects of 0.28 ± 0.48 and -0.33 ± 0.67, respectively. Estimates of direct and maternal heritabilities were unchanged when grandmaternal effects were not included in the model.

Estimates of genetic parameters for growth and skeletal measurements in Thai swamp buffalo

2000 ◽  
Vol 70 (3) ◽  
pp. 399-406
Author(s):  
K. Meyer ◽  
H. -U. Graser ◽  
A. Na-Chiangmai
Keyword(s):  
Total Variation ◽  
Genetic Association ◽  
Maternal Effects ◽  
Genetic Parameters ◽  
Genetic Effects ◽  
Environmental Correlations ◽  
Length Measurements ◽  
Swamp Buffalo ◽  
Heritability Estimates ◽  
Additive Genetic Effects

AbstractEstimates of genetic parameters were obtained for weight, hip height, heart girth and shoulder to pin length measurements on Thai swamp buffalo, recorded at birth and weaning. Direct heritability estimates were 0·26 for weights at both ages and were low for skeletal measurements, ranging from 0·11 to 0·19. Low values could, in part at least, be caused by inaccuracies in recording. All traits were subject to maternal effects, permanent environmental maternal effects on traits recorded at weaning explaining proportionately up to 0·14 of the total variation. Estimates of genetic (direct and maternal) and permanent environmental correlations between traits recorded at the same time were high throughout, ranging from 0·83 to 0·97 for additive genetic effects and being close to unity otherwise. Except for heart girth measured at weaning, there appeared to be comparatively little genetic association between traits recorded at different times, direct additive correlation estimates ranging from 0·18 to 0·55 in contrast to estimates of 0·38 to 0·65 for correlations with heart girth at weaning.

PSI-17 Genetic analysis of weaning weight in Hungarian Simmental cattle

2021 ◽  
Vol 99 (Supplement_3) ◽  
pp. 274-275
Author(s):  
Afees Ajasa ◽  
Barnabás Vágó ◽  
Imre Füller ◽  
István Komlósi ◽  
János Posta
Keyword(s):  
Variance Components ◽  
Random Effect ◽  
Random Effect Model ◽  
Genetic Effect ◽  
Genetic Effects ◽  
Covariance Model ◽  
Genetic Covariance ◽  
Weaning Weight ◽  
Effect Model ◽  
Maternal Heritability

Abstract The aim of the study was to partition the total phenotypic variation in the weaning weight of Hungarian Simmental calves into their various causal components. The data used was provided by the Association of Hungarian Simmental Breeders. The dataset comprised of the weaning weight records of 44,278 calves (sire = 879, dam = 14,811) born from 1975 to 2020. A total of six models were fitted to the weaning weight data. Herd, birth year, calving order and sex were included as fixed effects in the models. Model 1 had direct genetic effect as the only random effect. Model 2 had a permanent maternal environment as an additional random effect. Model 3 had both direct and maternal genetic effects, with their covariance is being zero. Model 4 was similar to Model 3 but with non-zero direct-maternal genetic covariance. Model 5 had direct, maternal genetic and permanent environmental effects and a zero direct-maternal genetic covariance. Model 6 was similar to model 5 but the direct-maternal genetic effect was assumed to be correlated. Variance components and genetic parameters were estimated using restricted maximum likelihood method with the Wombat software. The best fit model was determined using the Log likelihood ratio test. Inclusion of direct maternal genetic covariance increased the variance components estimates dramatically which resulted in a corresponding increase in the direct and maternal heritability estimates. The best fitted model (Model 4) had direct and maternal genetic effects as the only random effects with a non-zero direct-maternal genetic covariance. The direct heritability, maternal heritability and direct-maternal genetic correlation estimate of the best model was 0.57, 0.16 and -0.78, respectively. Our result suggests the problem of (co)sampling variation in the partitioning of additive genetic effect into direct and maternal components.

scholarly journals Estimates of (co)variance components and genetic parameters for growth traits in Suffolk lambs

2013 ◽  
Vol 43 (12) ◽  
pp. 2215-2220 ◽  
Author(s):  
Priscilla Regina Tamioso ◽  
Jaime Luiz Alberti Filho ◽  
Laila Talarico Dias ◽  
Rodrigo de Almeida Teixeira
Keyword(s):  
Maternal Effects ◽  
Variance Components ◽  
Genetic Parameters ◽  
Growth Traits ◽  
Genetic Effect ◽  
Additive Genetic Effect ◽  
Ratio Test ◽  
Effect Model ◽  
Estimate Heritability ◽  
Heritability Estimates

The study aimed to estimate the components of (co)variance and heritability for weights at birth (BW), weaning (WW) and 180 days of age (W180), as well as the average daily gains from birth to weaning (ADG1), birth to 180 days of age (ADG2) and weaning to 180 days of age (ADG3) in Suffolk sheep. Thus, three different single-trait animal models were fitted, considering the direct additive genetic effect (Model 1), the direct additive genetic and maternal permanent environmental effects (Model 2), and in Model 3, in addition to those in Model 2, the maternal additive genetic effect was included. After comparing models through the likelihood ratio test (LRT), model 3 was chosen as the most appropriate to estimate heritability for BW, WW and ADG1. Model 2 was considered as the best to estimate the coefficient of heritability for W180 and ADG2, and model 1 for ADG3. Direct heritability estimates were inflated when maternal effects were ignored. According to the most suitable models, the heritability estimates for BW, WW, W180, ADG1, ADG2 and ADG3 were 0.06, 0.08, 0.09, 0.07, 0.08 and 0.07, respectively, indicating low possibility of genetic gain through individual selection. The results show the importance of including maternal effects in the models to properly estimate genetic parameters even at post-weaning ages.

scholarly journals Maternal and direct genetic parameters for tail length, tail lesions and growth traits in pigs

2020 ◽  
Author(s):  
Sheila Aikins-Wilson ◽  
Mehdi Bohlouly ◽  
Sven König
Keyword(s):  
Maternal Effects ◽  
Genetic Parameters ◽  
Growth Traits ◽  
Tail Length ◽  
Breeding Value ◽  
Research Station ◽  
Weaning Weight ◽  
Tail Biting ◽  
Breeding Goal ◽  
Positive Direct

Abstract Tail length and tail lesions are major trigger for tail biting in pigs. Against this background, two datasets were analyzed to estimate genetic parameters for tail characteristics and growth traits. Dataset 1 considered measurements for trait tail length (T-LEN) and for the growth traits birth weight (BW), weaning weight (WW), post weaning weight (PWW) and average daily gain (ADG) from 9,348 piglets. Piglets were born in the period from 2015 to 2018, and kept on the university Gießen research station. Dataset 2 included 4,943 binary observations from 1,648 pigs from the birth years 2016 to 2019 for tail lesions (T-LES) as indicators for nail necrosis, tail abnormalities or tail biting. Tail lesions were recorded at 30 ± 7 days after entry for rearing (T-Les-1), at 50 ± 7 days after entry for rearing (end of rearing period, T-LES-2), and 130 ± 20 days after entry for rearing (end of fattening period, T-LES-3). Genetic statistical model evaluation for dataset 1 based on Akaike’s information criterion and likelihood ration tests suggested multiple-trait animal models considering covariances between direct and maternal genetic effects. The direct heritability for T-LEN was 0.42 (±0.03), indicating the potential for genetic selection on short tails. The maternal genetic heritability for T-LEN was 0.05 (±0.04), indicating influence of uterine characteristics on morphological traits. The negative correlation between direct and maternal effects for T-LEN of -0.35 (±0.13), as well as the antagonistic relationships (i.e., positive direct genetic correlations in the range from 0.03 to 0.40) between T-LEN with the growth traits BW, WW, PWW and ADG, complicate selection strategies and breeding goal definitions. The correlations between direct effects for T-LEN and maternal effects for breeding goal traits, and vice versa, were positive, but associated with quite large SE. The heritability for T-LES when considering the three repeated measurements was 0.23 (±0.04) from the linear (repeatability of 0.30) and 0.21 (±0.06) (repeatability of 0.29) from the threshold model. The breeding value correlations between T-LES-3 with breeding values from the repeatability models were quite large (0.74 – 0.90), suggesting trait lesion recording at the end of the rearing period. To understand all genetic mechanisms in detail, ongoing studies are focusing on association analyses between T-LEN and T-LES, and the identification of tail biting from an actor’s perspective.

Analisis Pengaruh Kepemilikan Blockholder, Kepemilikan Manajerial, Kepemilikan Institusional, dan Komite Audit terhadap Nilai Perusahaan

2018 ◽  
Vol 2 (1) ◽  
pp. 96-121
Author(s):  
Iwan Wirawardhana ◽  
Meco Sitardja
Keyword(s):  
Firm Value ◽  
Audit Committee ◽  
Stock Exchange ◽  
Random Effect ◽  
Random Effect Model ◽  
Institutional Ownership ◽  
Managerial Ownership ◽  
Estimation Model ◽  
Effect Model ◽  
Positive Effect

The aim of this study is to analyse the effect of Blockholder Ownership, Managerial Ownership,Institutional Ownership, and Audit Committee towards Firm Value. The background of this research isthe agency theory and ownership theory. The population in this study are 46 property companies listedon the Indonesia Stock Exchange (IDX) for the period 2012-2016. By using purposive samplingtechnique, 35 companies are qualified as data samples. This research uses the random effect model asthe estimation model and multiple regression as the method of analysis. The results of this study showsthat Institutional Ownership has a positive effect on Firm Value. Meanwhile, Blockholder Ownership,Managerial Ownership, and Audit Committee have no effect on Firm Value. Moreover, the F-testimplies that the variables, blockholder ownership, managerial ownership, institutional ownership, andaudit committee, simultaneously influence firm value.

scholarly journals Alteration of Postural Balance in Patients with Fibromyalgia Syndrome—A Systematic Review and Meta-Analysis

Diagnostics ◽  
2021 ◽  
Vol 11 (1) ◽  
pp. 127
Author(s):  
David Núñez-Fuentes ◽  
Esteban Obrero-Gaitán ◽  
Noelia Zagalaz-Anula ◽  
Alfonso Javier Ibáñez-Vera ◽  
Alexander Achalandabaso-Ochoa ◽  
...  
Keyword(s):  
Systematic Review ◽  
Postural Balance ◽  
Fibromyalgia Syndrome ◽  
Meta Analysis ◽  
Random Effect ◽  
Random Effect Model ◽  
Healthy Controls ◽  
Functional Balance ◽  
Sensory Organization ◽  
Effect Model

Balance problems are one of the most frequent symptoms in patients with Fibromyalgia Syndrome (FMS). However, the extent and nature of this balance disorder are not known. The objective of this work was to determine the best evidence for the alteration of postural balance in patients with FMS and analyze differences with healthy controls. To meet this objective, a systematic review with meta-analysis was performed. A bibliographical search was carried out in PubMed Medline, Scopus, Web of Science, CINAHL and SciELO. Observational studies that assessed postural balance in patients with FMS compared to healthy subjects in baseline conditions, were selected. In a random-effect model, the pooled effect was calculated with the Standardized Mean Difference (SMD) and its 95% confidence interval (CI). Nineteen studies reporting data of 2347 participants (95% female) were included. FMS patients showed poor balance with a large effect on static (SMD = 1.578; 95% CI = 1.164, 1.992), dynamic (SMD = 0.946; 95% CI = 0.598, 1.294), functional balance (SMD = 1.138; 95% CI = 0.689, 1.588) and on balance confidence (SMD = 1.194; 95% CI = 0.914, 1.473). Analysis of the Sensory Organization Test showed large alteration of vestibular (SMD = 1.631; 95% CI = 0.467, 2.795) and visual scores (SMD = 1.317; 95% CI = 0.153, 2.481) compared to healthy controls. Patients with FMS showed worse scores for different measures of postural balance compared to healthy controls. Concretely, FMS patients appear to have poor vestibular and visual scores with a possible somatosensory dependence.

scholarly journals Designing a Bonus-Malus system reflecting the claim size under the dependent frequency–severity model

2021 ◽  
pp. 1-25
Author(s):  
Rosy Oh ◽  
Joseph H.T. Kim ◽  
Jae Youn Ahn
Keyword(s):  
Recent Literature ◽  
Insurance Industry ◽  
Random Effect ◽  
Random Effect Model ◽  
Partial Solution ◽  
Risk Classification ◽  
Transition Rule ◽  
Auto Insurance ◽  
Dependent Frequency ◽  
Effect Model

In the auto insurance industry, a Bonus-Malus System (BMS) is commonly used as a posteriori risk classification mechanism to set the premium for the next contract period based on a policyholder's claim history. Even though the recent literature reports evidence of a significant dependence between frequency and severity, the current BMS practice is to use a frequency-based transition rule while ignoring severity information. Although Oh et al. [(2020). Bonus-Malus premiums under the dependent frequency-severity modeling. Scandinavian Actuarial Journal 2020(3): 172–195] claimed that the frequency-driven BMS transition rule can accommodate the dependence between frequency and severity, their proposal is only a partial solution, as the transition rule still completely ignores the claim severity and is unable to penalize large claims. In this study, we propose to use the BMS with a transition rule based on both frequency and size of claim, based on the bivariate random effect model, which conveniently allows dependence between frequency and severity. We analytically derive the optimal relativities under the proposed BMS framework and show that the proposed BMS outperforms the existing frequency-driven BMS. Later, numerical experiments are also provided using both hypothetical and actual datasets in order to assess the effect of various dependencies on the BMS risk classification and confirm our theoretical findings.

scholarly journals Magnitude and determinants of neural tube defect in Africa: a systematic review and meta-analysis

2021 ◽  
Vol 21 (1) ◽  
Author(s):  
Daniel Atlaw ◽  
Yohannes Tekalegn ◽  
Biniyam Sahiledengle ◽  
Kenbon Seyoum ◽  
Damtew Solomon ◽  
...  
Keyword(s):  
Systematic Review ◽  
Neural Tube ◽  
Meta Analysis ◽  
Random Effect ◽  
Random Effect Model ◽  
Folic Acid Supplementation ◽  
Maternal Exposure ◽  
X Ray ◽  
Effect Model ◽  
Pooled Prevalence

Abstract Background Neural tube defects (NTDs) are a group of disorders that arise from the failure of the neural tube close between 21 and 28 days after conception. About 90% of neural tube defects and 95% of death due to these defects occurs in low-income countries. Since these NTDs cause considerable morbidity and mortality, this study aimed to determine the prevalence and associated factors of NTDs in Africa. Methods The protocol of this study was registered in the International Prospective Register of Systematic Reviews (PROSPERO number: CRD42020149356). All major databases such as PubMed/MEDLINE, EMBASE, CINAHL, Web of Science, African Journals Online (AJOL), and Google Scholar search engine were systematically searched. A random-effect model was used to estimate the pooled prevalence of NTDs in Africa, and Cochran’s Q-statistics and I2 tests were used to assess heterogeneity between included studies. Publication bias was assessed using Begg ’s tests, and the association between determinant factors and NTDs was estimated using a random-effect model. Results Of the total 2679 articles, 37 articles fulfilled the inclusion criteria and were included in this systematic review and meta-analysis. The pooled prevalence of NTDs in Africa was 50.71 per 10,000 births (95% CI: 48.03, 53.44). Folic acid supplementation (AOR: 0.40; 95% CI: 0.19–0.85), maternal exposure to pesticide (AOR: 3.29; 95% CI: 1.04–10.39), mothers with a previous history of stillbirth (AOR: 3.35, 95% CI: 1.99–5.65) and maternal exposure to x-ray radiation (AOR 2.34; 95% CI: 1.27–4.31) were found to be determinants of NTDs. Conclusions The pooled prevalence of NTDs in Africa was found to be high. Maternal exposure to pesticides and x-ray radiation were significantly associated with NTDs. Folic acid supplementation before and within the first month of pregnancy was found to be a protective factor for NTDs.

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