Combining Machine Learning and Numerical Simulation for High-Resolution PM2.5 Concentration Forecast

Plant diseases can cause a considerable reduction in the quality and number of agricultural products. Guava, well known to be the tropics’ apple, is one significant fruit cultivated in tropical regions. It is attacked by 177 pathogens, including 167 fungal and others such as bacterial, algal, and nematodes. In addition, postharvest diseases may cause crucial production loss. Due to minor variations in various guava disease symptoms, an expert opinion is required for disease analysis. Improper diagnosis may cause economic losses to farmers’ improper use of pesticides. Automatic detection of diseases in plants once they emerge on the plants’ leaves and fruit is required to maintain high crop fields. In this paper, an artificial intelligence (AI) driven framework is presented to detect and classify the most common guava plant diseases. The proposed framework employs the ΔE color difference image segmentation to segregate the areas infected by the disease. Furthermore, color (RGB, HSV) histogram and textural (LBP) features are applied to extract rich, informative feature vectors. The combination of color and textural features are used to identify and attain similar outcomes compared to individual channels, while disease recognition is performed by employing advanced machine-learning classifiers (Fine KNN, Complex Tree, Boosted Tree, Bagged Tree, Cubic SVM). The proposed framework is evaluated on a high-resolution (18 MP) image dataset of guava leaves and fruit. The best recognition results were obtained by Bagged Tree classifier on a set of RGB, HSV, and LBP features (99% accuracy in recognizing four guava fruit diseases (Canker, Mummification, Dot, and Rust) against healthy fruit). The proposed framework may help the farmers to avoid possible production loss by taking early precautions.

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Identifying Urban Poverty Using High-Resolution Satellite Imagery and Machine Learning Approaches: Implications for Housing Inequality

Land ◽

10.3390/land10060648 ◽

2021 ◽

Vol 10 (6) ◽

pp. 648

Author(s):

Guie Li ◽

Zhongliang Cai ◽

Yun Qian ◽

Fei Chen

Keyword(s):

Machine Learning ◽

High Resolution ◽

Satellite Imagery ◽

Low Income ◽

Urban Poverty ◽

Image Features ◽

Housing Affordability ◽

Learning Approaches ◽

Housing Inequality ◽

High Resolution Satellite Imagery

Enriching Asian perspectives on the rapid identification of urban poverty and its implications for housing inequality, this paper contributes empirical evidence about the utility of image features derived from high-resolution satellite imagery and machine learning approaches for identifying urban poverty in China at the community level. For the case of the Jiangxia District and Huangpi District of Wuhan, image features, including perimeter, line segment detector (LSD), Hough transform, gray-level cooccurrence matrix (GLCM), histogram of oriented gradients (HoG), and local binary patterns (LBP), are calculated, and four machine learning approaches and 25 variables are applied to identify urban poverty and relatively important variables. The results show that image features and machine learning approaches can be used to identify urban poverty with the best model performance with a coefficient of determination, R2, of 0.5341 and 0.5324 for Jiangxia and Huangpi, respectively, although some differences exist among the approaches and study areas. The importance of each variable differs for each approach and study area; however, the relatively important variables are similar. In particular, four variables achieved relatively satisfactory prediction results for all models and presented obvious differences in varying communities with different poverty levels. Housing inequality within low-income neighborhoods, which is a response to gaps in wealth, income, and housing affordability among social groups, is an important manifestation of urban poverty. Policy makers can implement these findings to rapidly identify urban poverty, and the findings have potential applications for addressing housing inequality and proving the rationality of urban planning for building a sustainable society.

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Using U-Net-Like Deep Convolutional Neural Networks for Precise Tree Recognition in Very High Resolution RGB (Red, Green, Blue) Satellite Images

Forests ◽

10.3390/f12010066 ◽

2021 ◽

Vol 12 (1) ◽

pp. 66

Author(s):

Kirill A. Korznikov ◽

Dmitry E. Kislov ◽

Jan Altman ◽

Jiří Doležal ◽

Anna S. Vozmishcheva ◽

...

Keyword(s):

Machine Learning ◽

High Resolution ◽

Satellite Images ◽

Russian Far East ◽

Pinus Koraiensis ◽

Accuracy Score ◽

Learning Approaches ◽

Individual Tree ◽

Populus Suaveolens ◽

Very High

Very high resolution satellite imageries provide an excellent foundation for precise mapping of plant communities and even single plants. We aim to perform individual tree recognition on the basis of very high resolution RGB (red, green, blue) satellite images using deep learning approaches for northern temperate mixed forests in the Primorsky Region of the Russian Far East. We used a pansharpened satellite RGB image by GeoEye-1 with a spatial resolution of 0.46 m/pixel, obtained in late April 2019. We parametrized the standard U-Net convolutional neural network (CNN) and trained it in manually delineated satellite images to solve the satellite image segmentation problem. For comparison purposes, we also applied standard pixel-based classification algorithms, such as random forest, k-nearest neighbor classifier, naive Bayes classifier, and quadratic discrimination. Pattern-specific features based on grey level co-occurrence matrices (GLCM) were computed to improve the recognition ability of standard machine learning methods. The U-Net-like CNN allowed us to obtain precise recognition of Mongolian poplar (Populus suaveolens Fisch. ex Loudon s.l.) and evergreen coniferous trees (Abies holophylla Maxim., Pinus koraiensis Siebold & Zucc.). We were able to distinguish species belonging to either poplar or coniferous groups but were unable to separate species within the same group (i.e. A. holophylla and P. koraiensis were not distinguishable). The accuracy of recognition was estimated by several metrics and exceeded values obtained for standard machine learning approaches. In contrast to pixel-based recognition algorithms, the U-Net-like CNN does not lead to an increase in false-positive decisions when facing green-colored objects that are similar to trees. By means of U-Net-like CNN, we obtained a mean accuracy score of up to 0.96 in our computational experiments. The U-Net-like CNN recognizes tree crowns not as a set of pixels with known RGB intensities but as spatial objects with a specific geometry and pattern. This CNN’s specific feature excludes misclassifications related to objects of similar colors as objects of interest. We highlight that utilization of satellite images obtained within the suitable phenological season is of high importance for successful tree recognition. The suitability of the phenological season is conceptualized as a group of conditions providing highlighting objects of interest over other components of vegetation cover. In our case, the use of satellite images captured in mid-spring allowed us to recognize evergreen fir and pine trees as the first class of objects (“conifers”) and poplars as the second class, which were in a leafless state among other deciduous tree species.

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Interpretable machine learning model to detect chemically adulterated urine samples analyzed by high resolution mass spectrometry

Clinical Chemistry and Laboratory Medicine (CCLM) ◽

10.1515/cclm-2021-0010 ◽

2021 ◽

Vol 0 (0) ◽

Author(s):

Gabriel L. Streun ◽

Andrea E. Steuer ◽

Lars C. Ebert ◽

Akos Dobay ◽

Thomas Kraemer

Keyword(s):

Machine Learning ◽

Mass Spectrometry ◽

Liquid Chromatography ◽

High Resolution ◽

Retention Time ◽

Drug Testing ◽

High Resolution Mass Spectrometry ◽

Urine Samples ◽

Machine Learning Model ◽

Resolution Mass

Abstract Objectives Urine sample manipulation including substitution, dilution, and chemical adulteration is a continuing challenge for workplace drug testing, abstinence control, and doping control laboratories. The simultaneous detection of sample manipulation and prohibited drugs within one single analytical measurement would be highly advantageous. Machine learning algorithms are able to learn from existing datasets and predict outcomes of new data, which are unknown to the model. Methods Authentic human urine samples were treated with pyridinium chlorochromate, potassium nitrite, hydrogen peroxide, iodine, sodium hypochlorite, and water as control. In total, 702 samples, measured with liquid chromatography coupled to quadrupole time-of-flight mass spectrometry, were used. After retention time alignment within Progenesis QI, an artificial neural network was trained with 500 samples, each featuring 33,448 values. The feature importance was analyzed with the local interpretable model-agnostic explanations approach. Results Following 10-fold cross-validation, the mean sensitivity, specificity, positive predictive value, and negative predictive value was 88.9, 92.0, 91.9, and 89.2%, respectively. A diverse test set (n=202) containing treated and untreated urine samples could be correctly classified with an accuracy of 95.4%. In addition, 14 important features and four potential biomarkers were extracted. Conclusions With interpretable retention time aligned liquid chromatography high-resolution mass spectrometry data, a reliable machine learning model could be established that rapidly uncovers chemical urine manipulation. The incorporation of our model into routine clinical or forensic analysis allows simultaneous LC-MS analysis and sample integrity testing in one run, thus revolutionizing this field of drug testing.

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High-Resolution Atomic Absorption Spectrometry Combined With Machine Learning Data Processing for Isotope Amount Ratio Analysis of Lithium

Analytical Chemistry ◽

10.1021/acs.analchem.1c00206 ◽

2021 ◽

Author(s):

Alexander Winckelmann ◽

Sascha Nowak ◽

Silke Richter ◽

Sebastian Recknagel ◽

Jens Riedel ◽

...

Keyword(s):

Machine Learning ◽

High Resolution ◽

Data Processing ◽

Atomic Absorption Spectrometry ◽

Atomic Absorption ◽

Absorption Spectrometry ◽

Ratio Analysis ◽

Learning Data ◽

Isotope Amount Ratio

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Drill-Core Mineral Abundance Estimation Using Hyperspectral and High-Resolution Mineralogical Data

Remote Sensing ◽

10.3390/rs12071218 ◽

2020 ◽

Vol 12 (7) ◽

pp. 1218

Author(s):

Laura Tuşa ◽

Mahdi Khodadadzadeh ◽

Cecilia Contreras ◽

Kasra Rafiezadeh Shahi ◽

Margret Fuchs ◽

...

Keyword(s):

Machine Learning ◽

High Resolution ◽

Ore Deposits ◽

Machine Learning Algorithms ◽

Training Data ◽

Support Vector ◽

Drill Core ◽

Data Types ◽

Mineralogical Characterization ◽

Core Samples

Due to the extensive drilling performed every year in exploration campaigns for the discovery and evaluation of ore deposits, drill-core mapping is becoming an essential step. While valuable mineralogical information is extracted during core logging by on-site geologists, the process is time consuming and dependent on the observer and individual background. Hyperspectral short-wave infrared (SWIR) data is used in the mining industry as a tool to complement traditional logging techniques and to provide a rapid and non-invasive analytical method for mineralogical characterization. Additionally, Scanning Electron Microscopy-based image analyses using a Mineral Liberation Analyser (SEM-MLA) provide exhaustive high-resolution mineralogical maps, but can only be performed on small areas of the drill-cores. We propose to use machine learning algorithms to combine the two data types and upscale the quantitative SEM-MLA mineralogical data to drill-core scale. This way, quasi-quantitative maps over entire drill-core samples are obtained. Our upscaling approach increases result transparency and reproducibility by employing physical-based data acquisition (hyperspectral imaging) combined with mathematical models (machine learning). The procedure is tested on 5 drill-core samples with varying training data using random forests, support vector machines and neural network regression models. The obtained mineral abundance maps are further used for the extraction of mineralogical parameters such as mineral association.

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