scholarly journals HdeB chaperone activity is coupled to its intrinsic dynamic properties

2015 ◽  
Vol 5 (1) ◽  
Author(s):  
Jienv Ding ◽  
Chengfeng Yang ◽  
Xiaogang Niu ◽  
Yunfei Hu ◽  
Changwen Jin
2020 ◽  
Vol 89 (1) ◽  
pp. 389-415 ◽  
Author(s):  
Anaïs M.E. Cassaignau ◽  
Lisa D. Cabrita ◽  
John Christodoulou

Folding of polypeptides begins during their synthesis on ribosomes. This process has evolved as a means for the cell to maintain proteostasis, by mitigating the risk of protein misfolding and aggregation. The capacity to now depict this cellular feat at increasingly higher resolution is providing insight into the mechanistic determinants that promote successful folding. Emerging from these studies is the intimate interplay between protein translation and folding, and within this the ribosome particle is the key player. Its unique structural properties provide a specialized scaffold against which nascent polypeptides can begin to form structure in a highly coordinated, co-translational manner. Here, we examine how, as a macromolecular machine, the ribosome modulates the intrinsic dynamic properties of emerging nascent polypeptide chains and guides them toward their biologically active structures.


2017 ◽  
Vol 73 (10) ◽  
pp. 793-803 ◽  
Author(s):  
Yongfei Cai ◽  
Mingyang Su ◽  
Ashfaq Ahmad ◽  
Xiaojie Hu ◽  
Jiayan Sang ◽  
...  

Two-component systems (TCSs) are key elements in bacterial signal transduction in response to environmental stresses. TCSs generally consist of sensor histidine kinases (SKs) and their cognate response regulators (RRs). Many SKs exhibit autokinase, phosphoryltransferase and phosphatase activities, which regulate RR activity through a phosphorylation and dephosphorylation cycle. However, how SKs perform different enzymatic activities is poorly understood. Here, several crystal structures of the minimal catalytic region of WalK, an essential SK fromLactobacillus plantarumthat shares 60% sequence identity with its homologue VicK fromStreptococcus mutans, are presented. WalK adopts an asymmetrical closed structure in the presence of ATP or ADP, in which one of the CA domains is positioned close to the DHp domain, thus leading both the β- and γ-phosphates of ATP/ADP to form hydrogen bonds to the ∊- but not the δ-nitrogen of the phosphorylatable histidine in the DHp domain. In addition, the DHp domain in the ATP/ADP-bound state has a 25.7° asymmetrical helical bending coordinated with the repositioning of the CA domain; these processes are mutually exclusive and alternate in response to helicity changes that are possibly regulated by upstream signals. In the absence of ATP or ADP, however, WalK adopts a completely symmetric open structure with its DHp domain centred between two outward-reaching CA domains. In summary, these structures of WalK reveal the intrinsic dynamic properties of an SK structure as a molecular basis for multifunctionality.


2007 ◽  
Vol 19 (2) ◽  
pp. 106-108 ◽  
Author(s):  
Xia Zhang ◽  
James A. Gupta ◽  
Pedro J. Barrios ◽  
Greg Pakulski ◽  
Trevor J. Hall

2015 ◽  
Vol 735 ◽  
pp. 141-144 ◽  
Author(s):  
Ahad Javanmardi ◽  
Rouzbeh Abadi ◽  
Abdul Kadir Marsono ◽  
Masine Md Tap ◽  
Zulkepli Ibrahim ◽  
...  

The main objective of this study was to obtain the correlation between the severity of damage to the stiffness of the frame in the format of its intrinsic dynamic properties, the natural frequency of the structural system at damaged and undamaged state. In this research, a laboratory test was performed on the precast post-tension frame of a similar dimension and strength specification to Jabatan Kerja Raya (JKR) school buildings. The modal frame is a reduced in scale of 1 to 5 and subjected to cyclic lateral loadings and monitored its frequency through vibration test. The vibration test was performed at each end of the cycle of a lateral pushover test. The vibration data was recorded by accelerometers due to external forced vibration to assess its natural frequency, mode shapes and damping values of the system. This research found that there is a physical tangible relationship between natural frequency changes and stiffness in the frame. The results showed that as the severity of damage increases, the natural frequency of the frame decreases significantly, indicating that softening of the system that lead to a favorable ductility for earthquakes.


Author(s):  
R.F. Stump ◽  
J.R. Pfeiffer ◽  
JC. Seagrave ◽  
D. Huskisson ◽  
J.M. Oliver

In RBL-2H3 rat basophilic leukemia cells, antigen binding to cell surface IgE-receptor complexes stimulates the release of inflammatory mediators and initiates a series of membrane and cytoskeletal events including a transformation of the cell surface from a microvillous to a lamellar topography. It is likely that dynamic properties of the IgE receptor contribute to the activation of these responses. Fewtrell and Metzger have established that limited crosslinking of IgE-receptor complexes is essential to trigger secretion. In addition, Baird and colleagues have reported that antigen binding causes a rapid immobilization of IgE-receptor complexes, and we have demonstrated an apparent increase with time in the affinity of IgE-receptor complexes for antigen.


2006 ◽  
Vol 73 ◽  
pp. 109-119 ◽  
Author(s):  
Chris Stockdale ◽  
Michael Bruno ◽  
Helder Ferreira ◽  
Elisa Garcia-Wilson ◽  
Nicola Wiechens ◽  
...  

In the 30 years since the discovery of the nucleosome, our picture of it has come into sharp focus. The recent high-resolution structures have provided a wealth of insight into the function of the nucleosome, but they are inherently static. Our current knowledge of how nucleosomes can be reconfigured dynamically is at a much earlier stage. Here, recent advances in the understanding of chromatin structure and dynamics are highlighted. The ways in which different modes of nucleosome reconfiguration are likely to influence each other are discussed, and some of the factors likely to regulate the dynamic properties of nucleosomes are considered.


1980 ◽  
Vol 41 (C6) ◽  
pp. C6-404-C6-407 ◽  
Author(s):  
O. Kanert ◽  
R. Küchler ◽  
M. Mali
Keyword(s):  

1990 ◽  
Vol 51 (C1) ◽  
pp. C1-381-C1-390 ◽  
Author(s):  
M. FRIESEL ◽  
I. MANNA ◽  
W. GUST

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