A novel approach for precisely controlled multiple cell patterning in microfluidic chips by inkjet printing and the detection of drug metabolism and diffusion

The Analyst ◽  
2016 ◽  
Vol 141 (10) ◽  
pp. 2940-2947 ◽  
Author(s):  
Jie Zhang ◽  
Fengming Chen ◽  
Ziyi He ◽  
Yuan Ma ◽  
Katsumi Uchiyama ◽  
...  

A novel platform for precise cell patterning and analysis in microchips was developed by combining inkjet cell-printing and microfluidic chips.

2012 ◽  
Vol 20 (5) ◽  
pp. 528-533
Author(s):  
Hwa In Yoon ◽  
Ji Suk Choi ◽  
Byung Kook Lee ◽  
Je Hoon Oh ◽  
Yong Woo Cho

2020 ◽  
Vol 18 (01) ◽  
pp. 2040003 ◽  
Author(s):  
Nazmus Salehin ◽  
Patrick P. L. Tam ◽  
Pierre Osteil

Assays for transposase-accessible chromatin sequencing (ATAC-seq) provides an innovative approach to study chromatin status in multiple cell types. Moreover, it is also possible to efficiently extract differentially accessible chromatin (DACs) regions by using state-of-the-art algorithms (e.g. DESeq2) to predict gene activity in specific samples. Furthermore, it has recently been shown that small dips in sequencing peaks can be attributed to the binding of transcription factors. These dips, also known as footprints, can be used to identify trans-regulating interactions leading to gene expression. Current protocols used to identify footprints (e.g. pyDNAse and HINT-ATAC) have shown limitations resulting in the discovery of many false positive footprints. We generated a novel approach to identify genuine footprints within any given ATAC-seq dataset. Herein, we developed a new pipeline embedding DACs together with bona fide footprints resulting in the generation of a Predictive gene regulatory Network (PreNet) simply from ATAC-seq data. We further demonstrated that PreNet can be used to unveil meaningful molecular regulatory pathways in a given cell type.


Author(s):  
S. Murakami ◽  
Y. Morita ◽  
E. Nakamachi

Recently, the investigation of cell-activation and tissue regeneration process has shown the great progress in the biomedical and biomechanical research fields. In this study fabricated Biomedical-Micro Electric Mechanical System (Bio-MEMS) to examine accurately the cell activation by introducing the cell patterning assignment technique, which consists of the photolithograph method to generate the MEMS device and the cell patterning technique by using the dielectrophoresis (DEP) method. In the development of Bio-MEMS devices for cell culture and micro-bioreactor system, unresolved subjects, 1) the fundamental mechanism of cell activation, 2) the flow control of culture medium 3) the accurate cell pattern technique and 4) the implementation of positive DEP methods, are remained. In this study, we fabricate 2-D patterns of point by using the DEP method introducing the positive effects and the trap method by employing the gravity effect and the adhesion technique, to reveal the fundamental mechanism of cell activations, such as the nerve cell axon extension. We succeed to establish the cell patterning technique by using a novel electrode design technique, such as 2-D patterns of point. The results is shown that our novel approach using comprehensive designed electrodes is superior to cell patterning. Therefore, our device able to produce neural network consists of a large number of cells.


Materials ◽  
2020 ◽  
Vol 13 (7) ◽  
pp. 1514
Author(s):  
Reihaneh Jamshidi ◽  
Yuanfen Chen ◽  
Reza Montazami

Transient materials/electronics is an emerging class of technology concerned with materials and devices that are designed to operate over a pre-defined period of time, then undergo controlled degradation when exposed to stimuli. Degradation/transiency rate in solvent-triggered devices is strongly dependent on the chemical composition of the constituents, as well as their interactions with the solvent upon exposure. Such interactions are typically slow, passive, and diffusion-driven. In this study, we are introducing and exploring the integration of gas-forming reactions into transient materials/electronics to achieve expedited and active transiency. The integration of more complex chemical reaction paths to transiency not only expedites the dissolution mechanism but also maintains the pre-transiency stability of the system while under operation. A proof-of-concept transient electronic device, utilizing sodium-bicarbonate/citric-acid pair as gas-forming agents, is demonstrated and studied vs. control devices in the absence of gas-forming agents. While exhibiting enhanced transiency behavior, substrates with gas-forming agents also demonstrated sufficient mechanical properties and physical stability to be used as platforms for electronics.


Polymer ◽  
2010 ◽  
Vol 51 (10) ◽  
pp. 2147-2154 ◽  
Author(s):  
Jae Dong Kim ◽  
Ji Suk Choi ◽  
Beob Soo Kim ◽  
Young Chan Choi ◽  
Yong Woo Cho

Lab on a Chip ◽  
2012 ◽  
Vol 12 (17) ◽  
pp. 3089 ◽  
Author(s):  
Weizhi Shen ◽  
Mingzhu Li ◽  
Changqing Ye ◽  
Lei Jiang ◽  
Yanlin Song

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