Nuclear DNA content of three Eucalyptus species estimated by flow and image cytometry

2009 ◽  
Vol 57 (6) ◽  
pp. 524 ◽  
Author(s):  
Milene Miranda Praça ◽  
Carlos Roberto Carvalho ◽  
Carolina Ribeiro Diniz Boaventura Novaes
Keyword(s):  
Dna Content ◽  
Nuclear Dna ◽  
Methodological Approach ◽  
Nuclear Dna Content ◽  
Image Cytometry ◽  
Eucalyptus Species ◽  
International Consensus ◽  
Mean Values ◽  
Dna Contents ◽  
Nuclear Dna Contents

Previous flow cytometry (FCM) analyses delivered nearly equal mean values of nuclear 2C DNA content for Eucalyptus grandis Hill ex Maiden and E. urophylla S. T. Blake (1.33 pg and 1.34 pg, respectively), whereas E. globulus Labill. presented distinct mean values (1.09, 1.13 and 1.40). These differences have been attributed to the different methodological approach, utilised plant cultivar and presence of intrinsic metabolic compounds that affect fluorochrome fluorescence. In the present study, a FCM and image cytometry (ICM) design, following international consensus criteria, were adopted to reassess the nuclear DNA contents of the above-mentioned Eucalyptus species. Statistical analyses revealed either similar or discrepant nuclear DNA contents, depending on the standard species used and whether FCM or ICM was employed. Our results demonstrated that 2C DNA values obtained by FCM and ICM were most uniform when Solanum lycopersicum was used as a standard. Moreover, the values obtained for E. grandis and E. urophylla were close, but differed as much as 24.63% in relation to previous data, and E. globulus proportionally varied up to 25%. New DNA content values are suggested for these eucalypt species.

scholarly journals Genome Sizes in Hepatica Mill: (Ranunculaceae) Show a Loss of DNA, Not a Gain, in Polyploids

2010 ◽  
Vol 2010 ◽  
pp. 1-7 ◽  
Author(s):  
B. J. M. Zonneveld
Keyword(s):  
Flow Cytometry ◽  
Genome Size ◽  
Dna Content ◽  
Close Relationships ◽  
Nuclear Dna ◽  
Nuclear Dna Content ◽  
Dna Contents ◽  
Asiatic Species ◽  
Nuclear Dna Contents ◽  
Allotetraploid Species

Genome size (C-value) was applied anew to investigate the relationships within the genus Hepatica (Ranunculaceae). More than 50 samples representing all species (except H. falconeri), from wild and cultivated material, were investigated. Species of Hepatica turn out to be diploid (), tetraploid ( ), and a possible pentaploid. The somatic nuclear DNA contents (2C-value), as measured by flow cytometry with propidium iodide, were shown to range from 33 to 80 pg. The Asiatic and American species, often considered subspecies of H. nobilis, could be clearly distinguished from European H. nobilis. DNA content confirmed the close relationships in the Asiatic species, and these are here considered as subspecies of H. asiatica. Parents for the allotetraploid species could be suggested based on their nuclear DNA content. Contrary to the increase in genome size suggested earlier for Hepatica, a significant (6%–14%) loss of nuclear DNA in the natural allopolyploids was found.

THE 4C NUCLEAR DNA CONTENT OF SEVERAL HORDEUM GENOTYPES

1971 ◽  
Vol 13 (3) ◽  
pp. 607-611 ◽  
Author(s):  
Michael D. Bennett ◽  
J. B. Smith
Keyword(s):  
Dna Content ◽  
Nuclear Dna ◽  
Geographical Origin ◽  
Diploid Species ◽  
Nuclear Dna Content ◽  
Root Tip ◽  
Dna Contents ◽  
Hordeum Species ◽  
Nuclear Dna Contents ◽  
Physiological Characters

The 4C nuclear DNA content was estimated for 17 wild Hordeum species and five cultivated Hordeum vulgare varieties which were chosen to include examples varying greatly in geographical origin and in morphological and physiological characters. Nuclear DNA was measured on an integrating microdensitometer using prophase nuclei in Feulgen stained root-tip squashes. There were no significant differences in DNA content between any or the 15 diploid genotypes measured, and the seven polyploid genotypes all had nuclear DNA contents which were simple multiples of the diploid genotypes. This result, namely that the DNA content of diploid Hordeum species is invariable, differs from results obtained from diploid species in several other plant genera which differed greatly in nuclear DNA content.

scholarly journals Nuclear DNA endoreplication and plastid index in mesophyll of some dicotyledonous species

2014 ◽  
Vol 57 (3) ◽  
pp. 303-316 ◽  
Author(s):  
Barbara Damsz ◽  
Piotr Łuchniak
Keyword(s):  
Negative Correlation ◽  
Dna Content ◽  
Leaf Blade ◽  
Nuclear Dna ◽  
Nuclear Dna Content ◽  
Chloroplast Number ◽  
Dna Contents ◽  
R Value ◽  
Dna Endoreplication ◽  
Nuclear Dna Contents

Cytophotometric studies of nuclear DNA content after Feulgen procedure indicate that in mesophyll of all the seven studied species the highest nuclear DNA endoreplication level occurs in II or III leaf and it varies for particular species. No differences were found in nuclear DNA endoreplication dynamics between the basal and apical parts of the leaf blade. Chloroplast number per cell generally decreases in the successive leaves, and the plastid index is the smallest in the first (oldest) leaves, being similar in both zones. In four species chloroplast number and plastid index show relatively low negative correlation with nuclear DNA contents (expressed as endoreplication index), in two species this correlation is positive, and one species displays very low r value.

Nuclear DNA content of benomyl-induced segregants of diploid strains of the phytopathogenic fungus Armillaria mellea

1985 ◽  
Vol 27 (1) ◽  
pp. 47-50 ◽  
Author(s):  
J. B. Anderson ◽  
D. M. Petsche ◽  
A. L. Franklin
Keyword(s):  
Dna Content ◽  
Nuclear Dna ◽  
Nuclear Dna Content ◽  
Marker Locus ◽  
Phytopathogenic Fungus ◽  
Armillaria Mellea ◽  
Auxotrophic Marker ◽  
Dna Contents ◽  
Marker Loci ◽  
Nuclear Dna Contents

The relative nuclear DNA contents of haploid, diploid, and benomyl-induced segregants of diploid strains of the phytopathogenic fungus Armillaria mellea were measured by mithramycin staining and fluorescence photometry. The diploid strains, originally recovered from sexually compatible matings of haploid strains, were heterozygous at mating-type and auxotrophic marker loci. The somatic segregants examined here were derived by treatment of the diploid strains with the fungicide benomyl in previous studies. As expected, the diploid strains had approximately twice as much nuclear DNA as the haploid strains. Most segregants had near-haploid DNA contents and no detectable heterozygosity at the marker loci; these strains were most likely true haploids. Other segregants with near-haploid DNA contents were heterozygous at a marker locus indicating that they were aneuploid. A minority of segregants had near-diploid DNA contents and may have been either aneuploid or diploid.Key words: basidiomycetes, mithramycin, parasexuality.

scholarly journals Nuclear DNA Contents of Phalaenopsis sp. and Doritis pulcherrima

2001 ◽  
Vol 126 (2) ◽  
pp. 195-199 ◽  
Author(s):  
Sandy Lin ◽  
Hsiao-Ching Lee ◽  
Wen-Huei Chen ◽  
Chi-Chang Chen ◽  
Yen-Yu Kao ◽  
...  
Keyword(s):  
Flow Cytometry ◽  
Genome Analysis ◽  
Dna Content ◽  
Chromosome Numbers ◽  
Nuclear Dna ◽  
Nuclear Dna Content ◽  
Dna Contents ◽  
Nuclear Dna Contents ◽  
Different Levels ◽  
Dna Amounts

Nuclear DNA contents were estimated by flow cytometry in 18 Phalaenopsis Blume species and Doritis pulcherrima Lindl. DNA amounts differed 6.07-fold, from 2.74 pg/diploid nuclear DNA content (2C) in P. sanderiana Rchb.f. to 16.61 pg/2C in P. parishii Rchb.f. Nuclear DNA contents of P. aphrodite Rchb.f. clones, W01-38 (2n = 2x = 38), W01-41 (2n = 3x = 57), and W01-22 (2n = 4x = 76), displayed a linear relationship with their chromosome numbers, indicating the accuracy of flow cytometry. Our results also suggest that the 2C-values of the Phalaenopsis sp. correlate with their chromosome sizes. The comparative analyses of DNA contents may provide information to molecular geneticists and systematists for genome analysis in Phalaenopsis. Endoreduplication was found in various tissues of P. equestris at different levels. The highest degree of endoreduplication in P. equestris was detected in leaves.

Assessment of the cellular DNA content of whole mounted mouse and human oocytes and of blastomeres containing single or multiple nuclei

Zygote ◽  
1993 ◽  
Vol 1 (1) ◽  
pp. 17-25 ◽  
Author(s):  
Nicola J. Winston ◽  
Martin H. Johnson ◽  
Peter R. Braude
Keyword(s):  
Dna Content ◽  
Nuclear Dna ◽  
Nuclear Dna Content ◽  
Structural Features ◽  
Chromosomal Dna ◽  
Individual Values ◽  
Mean Values ◽  
Mouse Oocytes ◽  
Cellular Dna

SummaryThe nuclear DNA content of intact, live or fixed, human and mouse oocytes and blastomeres has been measured rapidly and reliably. Chromosomal DNA has been stained with DAPI, the fluorescent emission from which has been measured photocytometrically.In vitrofertilised mouse oocytes and embryos at various stages of development were assessed for their DNA content. The mean values of 1C, 2C and 4C DNA content were clearly different, and it was possible to assign correctly individual values for DNA content to each class with 92%, 61% and 81% confidence respectively. Maintaining the cells as whole mounts allowed other morphological and structural features to be examined. When formation of multiple micronuclei was induced in mouse oocytes by their insemination in the presence of nocodazole, the additive signal from all the micronuclei in one zygote was equivalent to the expected DNA content. Application to early human blastomeres of this photocytometric technique for measurement of the total cellular DNA content revealed that multinucleated blastomeres contained 2C to 4C DNA levels, consistent with a diploid DNA content.

The duration of meiosis

1971 ◽  
Vol 178 (1052) ◽  
pp. 277-299 ◽  
Keyword(s):  
Plant Species ◽  
Dna Content ◽  
Mitotic Cycle ◽  
Animal Species ◽  
Nuclear Dna ◽  
Nuclear Dna Content ◽  
Informational Content ◽  
Diploid Plant ◽  
Factors Affecting ◽  
Dna Contents

A survey of work on meiotic duration in diploid plants shows that the duration is positively correlated with the DNA content per nucleus and with the mitotic cycle time. However, meiotic duration is not solely determined by the DNA content per nucleus but is also affected by chromosomal organization, DNA structure and the developmental pattern of the organism. Thus, in three polyploid plant species meiosis is much shorter and in three animal species it is much longer than would be expected in diploid plant species having corresponding DNA contents. Differences in meiotic duration in plant species are usually the result of proportional differences in all the stages of meiosis. Factors affecting the initiation, control and duration of meiosis are discussed. The consequences of changes in nuclear DNA content on developmental processes and the life cycle in plants are considered. It is suggested that DNA influences development in two ways, first directly through its informational content, and second indirectly by the physical mechanical effects of its mass independent of its informational content.

scholarly journals Nuclear DNA Content and Chromatin Pattern of Rat Rhabdomyosarcoma Cell Sublines with Different Metastatic Potentials

2000 ◽  
Vol 20 (1) ◽  
pp. 41-48 ◽  
Author(s):  
Jean Dufer ◽  
Marie-France Poupon ◽  
Sonia Yatouji
Keyword(s):  
Tumor Cells ◽  
Cell Lines ◽  
Dna Content ◽  
Nuclear Dna ◽  
Chromatin Condensation ◽  
Nuclear Dna Content ◽  
Image Cytometry ◽  
Chromatin Pattern ◽  
Rhabdomyosarcoma Cell

There is a constant need of features able to characterize potentially metastatic cells among the heterogeneous cell subpopulations which constitute a tumor. Image cytometry of metastatic tumor cells give rise to variable results, partly because of a heterogeneous origin of cells, or potential drug effects. The aim of this work was to characterize nuclear changes observed in metastatic cell clones issuedin vitrofrom the same parental cell population The nuclear phenotypes of 6 cell sublines isolated from a rat rhabdomyosarcoma cell line and differing in their metastatic ability were evaluated by image cytometry on Feulgen‐stained preparations. Densitometric [5], geometric [3] and textural [9] features were computed from each nuclear image. For each cell subline, a metastatic score, ranging from 0 to 10, was calculated on the basis ofin vitroinvasivity data, by measuring the number of pulmonary metastases observed after s.c. graft of tumor cells in rats. Data obtained were compared to karyotype, growth characteristics, and oncogene expressions of cell lines. The nuclear DNA content, the chromosome numbers, the cell sublines doubling times, and the distribution of cells within the cell cycle appear unrelated with this score. On the contrary, increase in metastatic ability is accompanied by changes in chromatin pattern as assessed by textural features. Progressive increase in chromatin condensation can be observed in cell sublines with increasing metastatic score. These results were confirmed by an unsupervised multivariate partitioning of rhabdomyosarcoma cells which identified two separate subsets whose distributions within the analyzed cell lines correlate with their metastatic ability. These data suggest that, in rat rhabdomyosarcoma cell sublines, metastatic ability could be associated with nuclear morphological changes at the level of chromatin texture.

scholarly journals Estimates of nuclear DNA content in 98 species of brown algae (Phaeophyta)

AoB Plants ◽  
2011 ◽  
Vol 2011 ◽  
Author(s):  
Naomi Phillips ◽  
Donald F. Kapraun ◽  
Amelia Gómez Garreta ◽  
M. Antonia Ribera Siguan ◽  
Jorde L. Rull ◽  
...  
Keyword(s):  
Genome Size ◽  
Dna Content ◽  
Brown Algae ◽  
Nuclear Dna ◽  
Higher Plants ◽  
Nuclear Dna Content ◽  
Model Organisms ◽  
Dna Contents ◽  
Critical Components ◽  
Content Range

Abstract Background and aims Brown algae are critical components of marine ecosystems around the world. However, the genome of only one species of the class has so far been sequenced. This contrasts with numerous sequences available for model organisms such as higher plants, flies or worms. The present communication expands our coverage of DNA content information to 98 species of brown algae with a view to facilitating further genomic investigations of the class. Methodology The DNA-localizing fluorochrome DAPI (4′,6-diamidino-2-phenylindole) and the red blood cell (chicken erythrocyte) standard were used to estimate 2C values by static microspectrophotometry. Principal results 2C DNA contents are reported for 98 species of brown algae, almost doubling the number of estimates available for the class. The present results also expand the reported DNA content range to 0.2–3.6 pg, with several species of Fucales and Laminariales containing apparent polyploid genomes with 2C = 1.8–3.6 pg. Conclusions The data provide DNA content values for 12 of the 19 recognized orders of brown algae spanning the breadth of the class. Despite earlier contentions concerning DNA content and the presence of oogamy, the present results do not support a correlation between phylogenetic placement and genome size. The closest sister groups to the brown algae have genome sizes on the order of 0.3 pg (e.g. Schizocladiophyceae), suggesting that this may be the ancestral genome size. However, DNA content ranges widely across the class.

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