scholarly journals The duration of travel impacts the spatial dynamics of infectious diseases

2020 ◽  
Vol 117 (36) ◽  
pp. 22572-22579 ◽  
Author(s):  
John R. Giles ◽  
Elisabeth zu Erbach-Schoenberg ◽  
Andrew J. Tatem ◽  
Lauren Gardner ◽  
Ottar N. Bjørnstad ◽  
...  
Keyword(s):  
Infectious Diseases ◽  
Mobile Phone ◽  
Disease Transmission ◽  
Human Mobility ◽  
Trip Duration ◽  
Disease Dynamics ◽  
Mobility Patterns ◽  
Spatial And Temporal Scales ◽  
The Impact ◽  
Spatial Transmission

Humans can impact the spatial transmission dynamics of infectious diseases by introducing pathogens into susceptible environments. The rate at which this occurs depends in part on human-mobility patterns. Increasingly, mobile-phone usage data are used to quantify human mobility and investigate the impact on disease dynamics. Although the number of trips between locations and the duration of those trips could both affect infectious-disease dynamics, there has been limited work to quantify and model the duration of travel in the context of disease transmission. Using mobility data inferred from mobile-phone calling records in Namibia, we calculated both the number of trips between districts and the duration of these trips from 2010 to 2014. We fit hierarchical Bayesian models to these data to describe both the mean trip number and duration. Results indicate that trip duration is positively related to trip distance, but negatively related to the destination population density. The highest volume of trips and shortest trip durations were among high-density districts, whereas trips among low-density districts had lower volume with longer duration. We also analyzed the impact of including trip duration in spatial-transmission models for a range of pathogens and introduction locations. We found that inclusion of trip duration generally delays the rate of introduction, regardless of pathogen, and that the variance and uncertainty around spatial spread increases proportionally with pathogen-generation time. These results enhance our understanding of disease-dispersal dynamics driven by human mobility, which has potential to elucidate optimal spatial and temporal scales for epidemic interventions.

scholarly journals Human mobility patterns predict divergent epidemic dynamics among cities

2013 ◽  
Vol 280 (1766) ◽  
pp. 20130763 ◽  
Author(s):  
Benjamin D. Dalziel ◽  
Babak Pourbohloul ◽  
Stephen P. Ellner
Keyword(s):  
Infectious Disease ◽  
Infectious Diseases ◽  
Population Size ◽  
Human Mobility ◽  
Pathogen Transmission ◽  
Full Time ◽  
Disease Dynamics ◽  
Mobility Patterns ◽  
Epidemic Dynamics ◽  
Infectious Disease Dynamics

The epidemic dynamics of infectious diseases vary among cities, but it is unclear how this is caused by patterns of infectious contact among individuals. Here, we ask whether systematic differences in human mobility patterns are sufficient to cause inter-city variation in epidemic dynamics for infectious diseases spread by casual contact between hosts. We analyse census data on the mobility patterns of every full-time worker in 48 Canadian cities, finding a power-law relationship between population size and the level of organization in mobility patterns, where in larger cities, a greater fraction of workers travel to work in a few focal locations. Similarly sized cities also vary in the level of organization in their mobility patterns, equivalent on average to the variation expected from a 2.64-fold change in population size. Systematic variation in mobility patterns is sufficient to cause significant differences among cities in infectious disease dynamics—even among cities of the same size—according to an individual-based model of airborne pathogen transmission parametrized with the mobility data. This suggests that differences among cities in host contact patterns are sufficient to drive differences in infectious disease dynamics and provides a framework for testing the effects of host mobility patterns in city-level disease data.

scholarly journals The impact of biases in mobile phone ownership on estimates of human mobility

2013 ◽  
Vol 10 (81) ◽  
pp. 20120986 ◽  
Author(s):  
Amy Wesolowski ◽  
Nathan Eagle ◽  
Abdisalan M. Noor ◽  
Robert W. Snow ◽  
Caroline O. Buckee
Keyword(s):  
Mobile Phone ◽  
Human Mobility ◽  
Population Level ◽  
Time Frame ◽  
Data Sources ◽  
Mobile Phone Data ◽  
Human Populations ◽  
Mobility Patterns ◽  
Wide Range ◽  
The Impact

Mobile phone data are increasingly being used to quantify the movements of human populations for a wide range of social, scientific and public health research. However, making population-level inferences using these data is complicated by differential ownership of phones among different demographic groups that may exhibit variable mobility. Here, we quantify the effects of ownership bias on mobility estimates by coupling two data sources from the same country during the same time frame. We analyse mobility patterns from one of the largest mobile phone datasets studied, representing the daily movements of nearly 15 million individuals in Kenya over the course of a year. We couple this analysis with the results from a survey of socioeconomic status, mobile phone ownership and usage patterns across the country, providing regional estimates of population distributions of income, reported airtime expenditure and actual airtime expenditure across the country. We match the two data sources and show that mobility estimates are surprisingly robust to the substantial biases in phone ownership across different geographical and socioeconomic groups.

The Impact of Stationarity, Regularity, and Context on the Predictability of Individual Human Mobility

2021 ◽  
Vol 7 (4) ◽  
pp. 1-24
Author(s):  
Douglas Do Couto Teixeira ◽  
Aline Carneiro Viana ◽  
Jussara M. Almeida ◽  
Mrio S. Alvim
Keyword(s):  
State Of The Art ◽  
Human Mobility ◽  
Contextual Information ◽  
Prediction Method ◽  
Mobility Prediction ◽  
Mobility Patterns ◽  
Distinct Cell ◽  
Inherent Nature ◽  
The One ◽  
The Impact

Predicting mobility-related behavior is an important yet challenging task. On the one hand, factors such as one’s routine or preferences for a few favorite locations may help in predicting their mobility. On the other hand, several contextual factors, such as variations in individual preferences, weather, traffic, or even a person’s social contacts, can affect mobility patterns and make its modeling significantly more challenging. A fundamental approach to study mobility-related behavior is to assess how predictable such behavior is, deriving theoretical limits on the accuracy that a prediction model can achieve given a specific dataset. This approach focuses on the inherent nature and fundamental patterns of human behavior captured in that dataset, filtering out factors that depend on the specificities of the prediction method adopted. However, the current state-of-the-art method to estimate predictability in human mobility suffers from two major limitations: low interpretability and hardness to incorporate external factors that are known to help mobility prediction (i.e., contextual information). In this article, we revisit this state-of-the-art method, aiming at tackling these limitations. Specifically, we conduct a thorough analysis of how this widely used method works by looking into two different metrics that are easier to understand and, at the same time, capture reasonably well the effects of the original technique. We evaluate these metrics in the context of two different mobility prediction tasks, notably, next cell and next distinct cell prediction, which have different degrees of difficulty. Additionally, we propose alternative strategies to incorporate different types of contextual information into the existing technique. Our evaluation of these strategies offer quantitative measures of the impact of adding context to the predictability estimate, revealing the challenges associated with doing so in practical scenarios.

scholarly journals Modelling Representative Population Mobility for COVID-19 Spatial Transmission in South Africa

2021 ◽  
Vol 4 ◽  
Author(s):  
A. Potgieter ◽  
I. N. Fabris-Rotelli ◽  
Z. Kimmie ◽  
N. Dudeni-Tlhone ◽  
J. P. Holloway ◽  
...  
Keyword(s):  
Human Mobility ◽  
Data Sources ◽  
Population Mobility ◽  
Mobility Patterns ◽  
Mobility Data ◽  
The World ◽  
Spatial Weight ◽  
Data Source ◽  
Reduced Mobility ◽  
Spatial Transmission

The COVID-19 pandemic starting in the first half of 2020 has changed the lives of everyone across the world. Reduced mobility was essential due to it being the largest impact possible against the spread of the little understood SARS-CoV-2 virus. To understand the spread, a comprehension of human mobility patterns is needed. The use of mobility data in modelling is thus essential to capture the intrinsic spread through the population. It is necessary to determine to what extent mobility data sources convey the same message of mobility within a region. This paper compares different mobility data sources by constructing spatial weight matrices at a variety of spatial resolutions and further compares the results through hierarchical clustering. We consider four methods for constructing spatial weight matrices representing mobility between spatial units, taking into account distance between spatial units as well as spatial covariates. This provides insight for the user into which data provides what type of information and in what situations a particular data source is most useful.

scholarly journals Investigating the Complexity of Spatial Interactions between Different Administrative Units in China Using Flickr Data

2020 ◽  
Vol 12 (22) ◽  
pp. 9778
Author(s):  
Wei Zhu ◽  
Ding Ma ◽  
Zhigang Zhao ◽  
Renzhong Guo
Keyword(s):  
Power Law ◽  
Goodness Of Fit ◽  
Human Mobility ◽  
Scaling Analysis ◽  
Spatial Interactions ◽  
Mobility Patterns ◽  
Spatial And Temporal Scales ◽  
Movement Trajectories ◽  
Geotagged Photos ◽  
Great Complexity

Location-based social media have facilitated us to bridge the gap between virtual and physical worlds through the exploration of human online dynamics from a geographic perspective. This study uses a large collection of geotagged photos from Flickr to investigate the complexity of spatial interactions at the country level. We adopted three levels of administrative divisions in mainland China—province, city, and county—as basic geographic units and established three types of topology—province–province network, city–city network, and county–county network—from the extracted user movement trajectories. We conducted the scaling analysis based on heavy-tailed distribution statistics including power law exponents, goodness of fit index, and ht-index, by which we characterized a great complexity of the trajectory lengths, spatial distribution of geotagged photos, and the related metrics of built networks. The great complexity indicates the highly imbalanced ratio of populated-to-unpopulated areas or large-to-small flows between areas. More interestingly, all power law exponents were around 2 for the networks at various spatial and temporal scales. Such a recurrence of scaling statistics at multiple resolutions can be regarded a statistical self-similarity and could thus help us to reveal the fractal nature of human mobility patterns.

The Economics of Infectious Diseases

2018 ◽  
Author(s):  
Katharina Hauck
Keyword(s):  
Public Health ◽  
Infectious Diseases ◽  
Disease Transmission ◽  
Health Interventions ◽  
Health System Strengthening ◽  
Economic Research ◽  
Economic Evaluations ◽  
Research Needs ◽  
Public Health Interventions ◽  
The Impact

Economics can make immensely valuable contributions to our understanding of infectious disease transmission and the design of effective policy responses. The one unique characteristic of infectious diseases makes it also particularly complicated to analyze: the fact that it is transmitted from person to person. It explains why individuals’ behavior and externalities are a central topic for the economics of infectious diseases. Many public health interventions are built on the assumption that individuals are altruistic and consider the benefits and costs of their actions to others. This would imply that even infected individuals demand prevention, which stands in conflict with the economic theory of rational behavior. Empirical evidence is conflicting for infected individuals. For healthy individuals, evidence suggests that the demand for prevention is affected by real or perceived risk of infection. However, studies are plagued by underreporting of preventive behavior and non-random selection into testing. Some empirical studies have shown that the impact of prevention interventions could be far greater than one case prevented, resulting in significant externalities. Therefore, economic evaluations need to build on dynamic transmission models in order to correctly estimate these externalities. Future research needs are significant. Economic research needs to improve our understanding of the role of human behavior in disease transmission; support the better integration of economic and epidemiological modeling, evaluation of large-scale public health interventions with quasi-experimental methods, design of optimal subsidies for tackling the global threat of antimicrobial resistance, refocusing the research agenda toward underresearched diseases; and most importantly to assure that progress translates into saved lives on the ground by advising on effective health system strengthening.

scholarly journals Quantifying seasonal population fluxes driving rubella transmission dynamics using mobile phone data

2015 ◽  
Vol 112 (35) ◽  
pp. 11114-11119 ◽  
Author(s):  
Amy Wesolowski ◽  
C. J. E. Metcalf ◽  
Nathan Eagle ◽  
Janeth Kombich ◽  
Bryan T. Grenfell ◽  
...  
Keyword(s):  
Mobile Phone ◽  
Low Income ◽  
Spatial Data ◽  
Disease Transmission ◽  
Travel Behavior ◽  
Human Mobility ◽  
Mobile Phone Data ◽  
Cross Sectional ◽  
Unique Source ◽  
Rich Data

Changing patterns of human aggregation are thought to drive annual and multiannual outbreaks of infectious diseases, but the paucity of data about travel behavior and population flux over time has made this idea difficult to test quantitatively. Current measures of human mobility, especially in low-income settings, are often static, relying on approximate travel times, road networks, or cross-sectional surveys. Mobile phone data provide a unique source of information about human travel, but the power of these data to describe epidemiologically relevant changes in population density remains unclear. Here we quantify seasonal travel patterns using mobile phone data from nearly 15 million anonymous subscribers in Kenya. Using a rich data source of rubella incidence, we show that patterns of population travel (fluxes) inferred from mobile phone data are predictive of disease transmission and improve significantly on standard school term time and weather covariates. Further, combining seasonal and spatial data on travel from mobile phone data allows us to characterize seasonal fluctuations in risk across Kenya and produce dynamic importation risk maps for rubella. Mobile phone data therefore offer a valuable previously unidentified source of data for measuring key drivers of seasonal epidemics.

scholarly journals Assessing the use of mobile phone data to describe recurrent mobility patterns in spatial epidemic models

2017 ◽  
Vol 4 (5) ◽  
pp. 160950 ◽  
Author(s):  
Cecilia Panigutti ◽  
Michele Tizzoni ◽  
Paolo Bajardi ◽  
Zbigniew Smoreda ◽  
Vittoria Colizza
Keyword(s):  
Infectious Disease ◽  
Mobile Phone ◽  
Urban Areas ◽  
Large Scale ◽  
Human Mobility ◽  
Mobile Phone Data ◽  
Disease Models ◽  
Mobility Patterns ◽  
Mobility Data ◽  
Infectious Disease Models

The recent availability of large-scale call detail record data has substantially improved our ability of quantifying human travel patterns with broad applications in epidemiology. Notwithstanding a number of successful case studies, previous works have shown that using different mobility data sources, such as mobile phone data or census surveys, to parametrize infectious disease models can generate divergent outcomes. Thus, it remains unclear to what extent epidemic modelling results may vary when using different proxies for human movements. Here, we systematically compare 658 000 simulated outbreaks generated with a spatially structured epidemic model based on two different human mobility networks: a commuting network of France extracted from mobile phone data and another extracted from a census survey. We compare epidemic patterns originating from all the 329 possible outbreak seed locations and identify the structural network properties of the seeding nodes that best predict spatial and temporal epidemic patterns to be alike. We find that similarity of simulated epidemics is significantly correlated to connectivity, traffic and population size of the seeding nodes, suggesting that the adequacy of mobile phone data for infectious disease models becomes higher when epidemics spread between highly connected and heavily populated locations, such as large urban areas.

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