scholarly journals Modelling Representative Population Mobility for COVID-19 Spatial Transmission in South Africa

2021 ◽  
Vol 4 ◽  
Author(s):  
A. Potgieter ◽  
I. N. Fabris-Rotelli ◽  
Z. Kimmie ◽  
N. Dudeni-Tlhone ◽  
J. P. Holloway ◽  
...  
Keyword(s):  
Human Mobility ◽  
Data Sources ◽  
Population Mobility ◽  
Mobility Patterns ◽  
Mobility Data ◽  
The World ◽  
Spatial Weight ◽  
Data Source ◽  
Reduced Mobility ◽  
Spatial Transmission

The COVID-19 pandemic starting in the first half of 2020 has changed the lives of everyone across the world. Reduced mobility was essential due to it being the largest impact possible against the spread of the little understood SARS-CoV-2 virus. To understand the spread, a comprehension of human mobility patterns is needed. The use of mobility data in modelling is thus essential to capture the intrinsic spread through the population. It is necessary to determine to what extent mobility data sources convey the same message of mobility within a region. This paper compares different mobility data sources by constructing spatial weight matrices at a variety of spatial resolutions and further compares the results through hierarchical clustering. We consider four methods for constructing spatial weight matrices representing mobility between spatial units, taking into account distance between spatial units as well as spatial covariates. This provides insight for the user into which data provides what type of information and in what situations a particular data source is most useful.

scholarly journals Modelling Representative Population Mobility for COVID-19 Spatial Transmission in South Africa

2021 ◽  
Author(s):  
Arminn Potgieter ◽  
Inger Fabris-Rotelli ◽  
Zaid Kimmie ◽  
Nontembeko Dudeni-Tlhone ◽  
Jenny Holloway ◽  
...  
Keyword(s):  
South Africa ◽  
Human Mobility ◽  
Data Sources ◽  
Population Mobility ◽  
Mobility Patterns ◽  
Mobility Data ◽  
The World ◽  
Spatial Weight ◽  
Reduced Mobility ◽  
Spatial Transmission

The COVID-19 pandemic starting in the first half of 2020 has changed the lives of everyone across the world. Reduced mobility was essential due to it being the largest impact possible against the spread of the little understood SARS-CoV-2 virus. To understand the spread, a comprehension of human mobility patterns is needed. The use of mobility data in modelling is thus essential to capture the intrinsic spread through the population. It is necessary to determine to what extent mobility data convey the same message of mobility within a region. This paper compares different mobility data sources by constructing spatial weight matrices and further compares the results through hierarchical clustering. This provides insight for the user into which data provides what type of information and in what situations a particular source is most useful.

scholarly journals Comparative Analysis of Geolocation Information through Mobile-Devices under Different COVID-19 Mobility Restriction Patterns in Spain

2021 ◽  
Vol 10 (2) ◽  
pp. 73
Author(s):  
Raquel Pérez-Arnal ◽  
David Conesa ◽  
Sergio Alvarez-Napagao ◽  
Toyotaro Suzumura ◽  
Martí Català ◽  
...  
Keyword(s):  
Mobile Phones ◽  
Human Mobility ◽  
The Other ◽  
Data Sources ◽  
Experimental Setting ◽  
Mobile Data ◽  
Restriction Patterns ◽  
Mobility Data ◽  
The World ◽  
Proper Interpretation

The COVID-19 pandemic is changing the world in unprecedented and unpredictable ways. Human mobility, being the greatest facilitator for the spread of the virus, is at the epicenter of this change. In order to study mobility under COVID-19, to evaluate the efficiency of mobility restriction policies, and to facilitate a better response to future crisis, we need to understand all possible mobility data sources at our disposal. Our work studies private mobility sources, gathered from mobile-phones and released by large technological companies. These data are of special interest because, unlike most public sources, it is focused on individuals rather than on transportation means. Furthermore, the sample of society they cover is large and representative. On the other hand, these data are not directly accessible for anonymity reasons. Thus, properly interpreting its patterns demands caution. Aware of that, we explore the behavior and inter-relations of private sources of mobility data in the context of Spain. This country represents a good experimental setting due to both its large and fast pandemic peak and its implementation of a sustained, generalized lockdown. Our work illustrates how a direct and naive comparison between sources can be misleading, as certain days (e.g., Sundays) exhibit a directly adverse behavior. After understanding their particularities, we find them to be partially correlated and, what is more important, complementary under a proper interpretation. Finally, we confirm that mobile-data can be used to evaluate the efficiency of implemented policies, detect changes in mobility trends, and provide insights into what new normality means in Spain.

scholarly journals Risk mapping for COVID-19 outbreaks in Australia using mobility data

2021 ◽  
Vol 18 (174) ◽  
pp. 20200657
Author(s):  
Cameron Zachreson ◽  
Lewis Mitchell ◽  
Michael J. Lydeamore ◽  
Nicolas Rebuli ◽  
Martin Tomko ◽  
...  
Keyword(s):  
Simple Procedure ◽  
Human Mobility ◽  
Transmission Risk ◽  
Population Mobility ◽  
Effective Response ◽  
Geographical Patterns ◽  
Mobility Data ◽  
Community Transmission ◽  
Geographically Targeted ◽  
Spatial Transmission

COVID-19 is highly transmissible and containing outbreaks requires a rapid and effective response. Because infection may be spread by people who are pre-symptomatic or asymptomatic, substantial undetected transmission is likely to occur before clinical cases are diagnosed. Thus, when outbreaks occur there is a need to anticipate which populations and locations are at heightened risk of exposure. In this work, we evaluate the utility of aggregate human mobility data for estimating the geographical distribution of transmission risk. We present a simple procedure for producing spatial transmission risk assessments from near-real-time population mobility data. We validate our estimates against three well-documented COVID-19 outbreaks in Australia. Two of these were well-defined transmission clusters and one was a community transmission scenario. Our results indicate that mobility data can be a good predictor of geographical patterns of exposure risk from transmission centres, particularly in outbreaks involving workplaces or other environments associated with habitual travel patterns. For community transmission scenarios, our results demonstrate that mobility data add the most value to risk predictions when case counts are low and spatially clustered. Our method could assist health systems in the allocation of testing resources, and potentially guide the implementation of geographically targeted restrictions on movement and social interaction.

scholarly journals A Large-Scale COVID-19 Twitter Chatter Dataset for Open Scientific Research—An International Collaboration

Epidemiologia ◽  
2021 ◽  
Vol 2 (3) ◽  
pp. 315-324
Author(s):  
Juan M. Banda ◽  
Ramya Tekumalla ◽  
Guanyu Wang ◽  
Jingyuan Yu ◽  
Tuo Liu ◽  
...  
Keyword(s):  
Large Scale ◽  
Social Dynamics ◽  
Additional Data ◽  
Open Data ◽  
Data Sources ◽  
Research Projects ◽  
Research Groups ◽  
The World ◽  
Data Source

As the COVID-19 pandemic continues to spread worldwide, an unprecedented amount of open data is being generated for medical, genetics, and epidemiological research. The unparalleled rate at which many research groups around the world are releasing data and publications on the ongoing pandemic is allowing other scientists to learn from local experiences and data generated on the front lines of the COVID-19 pandemic. However, there is a need to integrate additional data sources that map and measure the role of social dynamics of such a unique worldwide event in biomedical, biological, and epidemiological analyses. For this purpose, we present a large-scale curated dataset of over 1.12 billion tweets, growing daily, related to COVID-19 chatter generated from 1 January 2020 to 27 June 2021 at the time of writing. This data source provides a freely available additional data source for researchers worldwide to conduct a wide and diverse number of research projects, such as epidemiological analyses, emotional and mental responses to social distancing measures, the identification of sources of misinformation, stratified measurement of sentiment towards the pandemic in near real time, among many others.

scholarly journals A novel geo-hierarchical population mobility model for spatial spreading of resurgent epidemics

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Alexandru Topîrceanu ◽  
Radu-Emil Precup
Keyword(s):  
Computational Models ◽  
Human Mobility ◽  
Discrete Event ◽  
Mobility Model ◽  
Hierarchical Organization ◽  
Population Mobility ◽  
Mobility Patterns ◽  
Fine Grained ◽  
Epidemic Size ◽  
Control Of Epidemics

AbstractComputational models for large, resurgent epidemics are recognized as a crucial tool for predicting the spread of infectious diseases. It is widely agreed, that such models can be augmented with realistic multiscale population models and by incorporating human mobility patterns. Nevertheless, a large proportion of recent studies, aimed at better understanding global epidemics, like influenza, measles, H1N1, SARS, and COVID-19, underestimate the role of heterogeneous mixing in populations, characterized by strong social structures and geography. Motivated by the reduced tractability of studies employing homogeneous mixing, which make conclusions hard to deduce, we propose a new, very fine-grained model incorporating the spatial distribution of population into geographical settlements, with a hierarchical organization down to the level of households (inside which we assume homogeneous mixing). In addition, population is organized heterogeneously outside households, and we model the movement of individuals using travel distance and frequency parameters for inter- and intra-settlement movement. Discrete event simulation, employing an adapted SIR model with relapse, reproduces important qualitative characteristics of real epidemics, like high variation in size and temporal heterogeneity (e.g., waves), that are challenging to reproduce and to quantify with existing measures. Our results pinpoint an important aspect, that epidemic size is more sensitive to the increase in distance of travel, rather that the frequency of travel. Finally, we discuss implications for the control of epidemics by integrating human mobility restrictions, as well as progressive vaccination of individuals.

scholarly journals Mobility Patterns in Different Age Groups in Japan during the COVID-19 Pandemic: a Small Area Time Series Analysis through March 2021

2021 ◽  
Author(s):  
Shuhei Nomura ◽  
Yuta Tanoue ◽  
Daisuke Yoneoka ◽  
Stuart Gilmour ◽  
Takayuki Kawashima ◽  
...  
Keyword(s):  
Care Delivery ◽  
Human Mobility ◽  
Age Groups ◽  
Virus Transmission ◽  
Initial Response ◽  
Health Care Delivery System ◽  
Population Characteristics ◽  
Mobility Patterns ◽  
Mobility Data ◽  
The Status

AbstractIn the COVID-19 era, movement restrictions are crucial to slow virus transmission and have been implemented in most parts of the world, including Japan. To find new insights on human mobility and movement restrictions encouraged (but not forced) by the emergency declaration in Japan, we analyzed mobility data at 35 major stations and downtown areas in Japan—each defined as an area overlaid by several 125-meter grids—from September 1, 2019 to March 19, 2021. Data on the total number of unique individuals per hour passing through each area were obtained from Yahoo Japan Corporation (i.e., more than 13,500 data points for each area). We examined the temporal trend in the ratio of the rolling seven-day daily average of the total population to a baseline on January 16, 2020, by ten-year age groups in five time frames. We demonstrated that the degree and trend of mobility decline after the declaration of a state of emergency varies across age groups and even at the subregional level. We demonstrated that monitoring dynamic geographic and temporal mobility information stratified by detailed population characteristics can help guide not only exit strategies from an ongoing emergency declaration, but also initial response strategies before the next possible resurgence. Combining such detailed data with data on vaccination coverage and COVID-19 incidence (including the status of the health care delivery system) can help governments and local authorities develop community-specific mobility restriction policies. This could include strengthening incentives to stay home and raising awareness of cognitive errors that weaken people's resolve to refrain from nonessential movement.

scholarly journals Universal predictability of mobility patterns in cities

2014 ◽  
Vol 11 (100) ◽  
pp. 20140834 ◽  
Author(s):  
Xiao-Yong Yan ◽  
Chen Zhao ◽  
Ying Fan ◽  
Zengru Di ◽  
Wen-Xu Wang
Keyword(s):  
Spatial Scales ◽  
Human Mobility ◽  
Mobility Patterns ◽  
Mobility Data ◽  
Universal Prediction ◽  
Potential Applications ◽  
Mobility Behaviour ◽  
History Of ◽  
Different Characteristics ◽  
The City

Despite the long history of modelling human mobility, we continue to lack a highly accurate approach with low data requirements for predicting mobility patterns in cities. Here, we present a population-weighted opportunities model without any adjustable parameters to capture the underlying driving force accounting for human mobility patterns at the city scale. We use various mobility data collected from a number of cities with different characteristics to demonstrate the predictive power of our model. We find that insofar as the spatial distribution of population is available, our model offers universal prediction of mobility patterns in good agreement with real observations, including distance distribution, destination travel constraints and flux. By contrast, the models that succeed in modelling mobility patterns in countries are not applicable in cities, which suggests that there is a diversity of human mobility at different spatial scales. Our model has potential applications in many fields relevant to mobility behaviour in cities, without relying on previous mobility measurements.

scholarly journals Non-compulsory measures sufficiently reduced human mobility in Tokyo during the COVID-19 epidemic

2020 ◽  
Vol 10 (1) ◽  
Author(s):  
Takahiro Yabe ◽  
Kota Tsubouchi ◽  
Naoya Fujiwara ◽  
Takayuki Wada ◽  
Yoshihide Sekimoto ◽  
...  
Keyword(s):  
Large Scale ◽  
Human Mobility ◽  
Social Contact ◽  
Mobility Patterns ◽  
State Of Emergency ◽  
Social Contacts ◽  
Policy Makers ◽  
Mobility Data ◽  
Contact Rates ◽  
Mobility Behavior

Abstract While large scale mobility data has become a popular tool to monitor the mobility patterns during the COVID-19 pandemic, the impacts of non-compulsory measures in Tokyo, Japan on human mobility patterns has been under-studied. Here, we analyze the temporal changes in human mobility behavior, social contact rates, and their correlations with the transmissibility of COVID-19, using mobility data collected from more than 200K anonymized mobile phone users in Tokyo. The analysis concludes that by April 15th (1 week into state of emergency), human mobility behavior decreased by around 50%, resulting in a 70% reduction of social contacts in Tokyo, showing the strong relationships with non-compulsory measures. Furthermore, the reduction in data-driven human mobility metrics showed correlation with the decrease in estimated effective reproduction number of COVID-19 in Tokyo. Such empirical insights could inform policy makers on deciding sufficient levels of mobility reduction to contain the disease.

scholarly journals Assessing the use of mobile phone data to describe recurrent mobility patterns in spatial epidemic models

2017 ◽  
Vol 4 (5) ◽  
pp. 160950 ◽  
Author(s):  
Cecilia Panigutti ◽  
Michele Tizzoni ◽  
Paolo Bajardi ◽  
Zbigniew Smoreda ◽  
Vittoria Colizza
Keyword(s):  
Infectious Disease ◽  
Mobile Phone ◽  
Urban Areas ◽  
Large Scale ◽  
Human Mobility ◽  
Mobile Phone Data ◽  
Disease Models ◽  
Mobility Patterns ◽  
Mobility Data ◽  
Infectious Disease Models

The recent availability of large-scale call detail record data has substantially improved our ability of quantifying human travel patterns with broad applications in epidemiology. Notwithstanding a number of successful case studies, previous works have shown that using different mobility data sources, such as mobile phone data or census surveys, to parametrize infectious disease models can generate divergent outcomes. Thus, it remains unclear to what extent epidemic modelling results may vary when using different proxies for human movements. Here, we systematically compare 658 000 simulated outbreaks generated with a spatially structured epidemic model based on two different human mobility networks: a commuting network of France extracted from mobile phone data and another extracted from a census survey. We compare epidemic patterns originating from all the 329 possible outbreak seed locations and identify the structural network properties of the seeding nodes that best predict spatial and temporal epidemic patterns to be alike. We find that similarity of simulated epidemics is significantly correlated to connectivity, traffic and population size of the seeding nodes, suggesting that the adequacy of mobile phone data for infectious disease models becomes higher when epidemics spread between highly connected and heavily populated locations, such as large urban areas.

scholarly journals Lockdown related travel behavior undermines the containment of SARS-CoV-2

2020 ◽  
Author(s):  
Nishant Kishore ◽  
Rebecca Kahn ◽  
Pamela P. Martinez ◽  
Pablo M. De Salazar ◽  
Ayesha S. Mahmud ◽  
...  
Keyword(s):  
Rural Areas ◽  
Travel Behavior ◽  
Human Mobility ◽  
Unintended Consequences ◽  
Disease Spread ◽  
Mobility Patterns ◽  
Long Distance ◽  
Mobility Data ◽  
Travel Restrictions ◽  
The Impact

ABSTRACTIn response to the SARS-CoV-2 pandemic, unprecedented policies of travel restrictions and stay-at-home orders were enacted around the world. Ultimately, the public’s response to announcements of lockdowns - defined here as restrictions on both local movement or long distance travel - will determine how effective these kinds of interventions are. Here, we measure the impact of the announcement and implementation of lockdowns on human mobility patterns by analyzing aggregated mobility data from mobile phones. We find that following the announcement of lockdowns, both local and long distance movement increased. To examine how these behavioral responses to lockdown policies may contribute to epidemic spread, we developed a simple agent-based spatial model. We find that travel surges following announcements of lockdowns can increase seeding of the epidemic in rural areas, undermining the goal of the lockdown of preventing disease spread. Appropriate messaging surrounding the announcement of lockdowns and measures to decrease unnecessary travel are important for preventing these unintended consequences of lockdowns.

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