scholarly journals Pore dimensions and the role of occupancy in unitary conductance of Shaker K channels

2015 ◽  
Vol 146 (2) ◽  
pp. 133-146 ◽  
Author(s):  
Ignacio Díaz-Franulic ◽  
Romina V. Sepúlveda ◽  
Nieves Navarro-Quezada ◽  
Fernando González-Nilo ◽  
David Naranjo
Keyword(s):  
Energy Gap ◽  
Bk Channel ◽  
Selectivity Filter ◽  
K Channel ◽  
Detectable Effect ◽  
Structural Determinants ◽  
K Channels ◽  
Ion Translocation ◽  
Unitary Conductance ◽  
K Transport

K channels mediate the selective passage of K+ across the plasma membrane by means of intimate interactions with ions at the pore selectivity filter located near the external face. Despite high conservation of the selectivity filter, the K+ transport properties of different K channels vary widely, with the unitary conductance spanning a range of over two orders of magnitude. Mutation of Pro475, a residue located at the cytoplasmic entrance of the pore of the small-intermediate conductance K channel Shaker (Pro475Asp (P475D) or Pro475Gln (P475Q)), increases Shaker’s reported ∼20-pS conductance by approximately six- and approximately threefold, respectively, without any detectable effect on its selectivity. These findings suggest that the structural determinants underlying the diversity of K channel conductance are distinct from the selectivity filter, making P475D and P475Q excellent probes to identify key determinants of the K channel unitary conductance. By measuring diffusion-limited unitary outward currents after unilateral addition of 2 M sucrose to the internal solution to increase its viscosity, we estimated a pore internal radius of capture of ∼0.82 Å for all three Shaker variants (wild type, P475D, and P475Q). This estimate is consistent with the internal entrance of the Kv1.2/2.1 structure if the effective radius of hydrated K+ is set to ∼4 Å. Unilateral exposure to sucrose allowed us to estimate the internal and external access resistances together with that of the inner pore. We determined that Shaker resistance resides mainly in the inner cavity, whereas only ∼8% resides in the selectivity filter. To reduce the inner resistance, we introduced additional aspartate residues into the internal vestibule to favor ion occupancy. No aspartate addition raised the maximum unitary conductance, measured at saturating [K+], beyond that of P475D, suggesting an ∼200-pS conductance ceiling for Shaker. This value is approximately one third of the maximum conductance of the large conductance K (BK) channel (the K channel of highest conductance), reducing the energy gap between their K+ transport rates to ∼1 kT. Thus, although Shaker’s pore sustains ion translocation as the BK channel’s does, higher energetic costs of ion stabilization or higher friction with the ion’s rigid hydration cage in its narrower aqueous cavity may entail higher resistance.

scholarly journals Selective Proton-Mediated Transport by Electrogenic K+-Binding Macrocycles

Chemistry ◽  
2020 ◽  
Vol 2 (1) ◽  
pp. 11-21
Author(s):  
Yu-Hao Li ◽  
Shao-Ping Zheng ◽  
Dawei Wang ◽  
Mihail Barboiu
Keyword(s):  
Ion Channels ◽  
Therapeutic Agents ◽  
K Channel ◽  
Transport Activity ◽  
Selective Activation ◽  
K Channels ◽  
High K ◽  
Carbonyl Cyanide ◽  
Self Assembled ◽  
K Transport

Synthetic K+-binding macrocycles have potential as therapeutic agents for diseases associated with KcsA K+ channel dysfunction. We recently discovered that artificial self-assembled n-alkyl-benzoureido-15-crown-5-ether form selective ion-channels for K+ cations, which are highly preferred to Na+ cations. Here, we describe an impressive selective activation of the K+ transport via electrogenic macrocycles, stimulated by the addition of the carbonyl cyanide-4-(trifluoromethoxy) phenylhydrazone (FCCP) proton carrier. The transport performances show that both the position of branching or the size of appended alkyl arms favor high transport activity and selectivity SK+/Na+ up to 48.8, one of the best values reported up to now. Our study demonstrates that high K+/Na+ selectivity obtained with natural KcsA K+ channels is achievable using simpler artificial macrocycles displaying constitutional functions.

scholarly journals State-dependent Block of BK Channels by Synthesized Shaker Ball Peptides

2006 ◽  
Vol 128 (4) ◽  
pp. 423-441 ◽  
Author(s):  
Weiyan Li ◽  
Richard W. Aldrich
Keyword(s):  
Bk Channels ◽  
Bk Channel ◽  
K Channel ◽  
Kinetic Measurements ◽  
K Channels ◽  
Functional Studies ◽  
State Dependent ◽  
Quaternary Ammonium Ions ◽  
Pore Lining ◽  
Cytoplasmic Side

Crystal structures of potassium channels have strongly corroborated an earlier hypothetical picture based on functional studies, in which the channel gate was located on the cytoplasmic side of the pore. However, accessibility studies on several types of ligand-sensitive K+ channels have suggested that their activation gates may be located near or within the selectivity filter instead. It remains to be determined to what extent the physical location of the gate is conserved across the large K+ channel family. Direct evidence about the location of the gate in large conductance calcium-activated K+ (BK) channels, which are gated by both voltage and ligand (calcium), has been scarce. Our earlier kinetic measurements of the block of BK channels by internal quaternary ammonium ions have raised the possibility that they may lack a cytoplasmic gate. We show in this study that a synthesized Shaker ball peptide (ShBP) homologue acts as a state-dependent blocker for BK channels when applied internally, suggesting a widening at the intracellular end of the channel pore upon gating. This is consistent with a gating-related conformational change at the cytoplasmic end of the pore-lining helices, as suggested by previous functional and structural studies on other K+ channels. Furthermore, our results from two BK channel mutations demonstrate that similar types of interactions between ball peptides and channels are shared by BK and other K+ channel types.

scholarly journals Mechanism of activation at the selectivity filter of the KcsA K+ channel

eLife ◽  
2017 ◽  
Vol 6 ◽  
Author(s):  
Florian T Heer ◽  
David J Posson ◽  
Wojciech Wojtas-Niziurski ◽  
Crina M Nimigean ◽  
Simon Bernèche
Keyword(s):  
Conformational Changes ◽  
Selectivity Filter ◽  
K Channel ◽  
Ion Permeation ◽  
K Channels ◽  
Narrow Region ◽  
Gating Mechanism ◽  
Structural Fluctuations ◽  
Extracellular Side ◽  
Dynamics Simulations

Potassium channels are opened by ligands and/or membrane potential. In voltage-gated K+ channels and the prokaryotic KcsA channel, conduction is believed to result from opening of an intracellular constriction that prevents ion entry into the pore. On the other hand, numerous ligand-gated K+ channels lack such gate, suggesting that they may be activated by a change within the selectivity filter, a narrow region at the extracellular side of the pore. Using molecular dynamics simulations and electrophysiology measurements, we show that ligand-induced conformational changes in the KcsA channel removes steric restraints at the selectivity filter, thus resulting in structural fluctuations, reduced K+ affinity, and increased ion permeation. Such activation of the selectivity filter may be a universal gating mechanism within K+ channels. The occlusion of the pore at the level of the intracellular gate appears to be secondary.

scholarly journals Selectivity filter gating in large-conductance Ca2+-activated K+ channels

2012 ◽  
Vol 139 (3) ◽  
pp. 235-244 ◽  
Author(s):  
Jill Thompson ◽  
Ted Begenisich
Keyword(s):  
Bk Channels ◽  
Bk Channel ◽  
Selectivity Filter ◽  
Channel Blockers ◽  
Intracellular Location ◽  
K Channels ◽  
Kv Channels ◽  
Quaternary Ammonium Ions ◽  
Tetrabutyl Ammonium ◽  
Opposite Behavior

Membrane voltage controls the passage of ions through voltage-gated K (Kv) channels, and many studies have demonstrated that this is accomplished by a physical gate located at the cytoplasmic end of the pore. Critical to this determination were the findings that quaternary ammonium ions and certain peptides have access to their internal pore-blocking sites only when the channel gates are open, and that large blocking ions interfere with channel closing. Although an intracellular location for the physical gate of Kv channels is well established, it is not clear if such a cytoplasmic gate exists in all K+ channels. Some studies on large-conductance, voltage- and Ca2+-activated K+ (BK) channels suggest a cytoplasmic location for the gate, but other findings question this conclusion and, instead, support the concept that BK channels are gated by the pore selectivity filter. If the BK channel is gated by the selectivity filter, the interactions between the blocking ions and channel gating should be influenced by the permeant ion. Thus, we tested tetrabutyl ammonium (TBA) and the Shaker “ball” peptide (BP) on BK channels with either K+ or Rb+ as the permeant ion. When tested in K+ solutions, both TBA and the BP acted as open-channel blockers of BK channels, and the BP interfered with channel closing. In contrast, when Rb+ replaced K+ as the permeant ion, TBA and the BP blocked both closed and open BK channels, and the BP no longer interfered with channel closing. We also tested the cytoplasmically gated Shaker K channels and found the opposite behavior: the interactions of TBA and the BP with these Kv channels were independent of the permeant ion. Our results add significantly to the evidence against a cytoplasmic gate in BK channels and represent a positive test for selectivity filter gating.

scholarly journals Two Stable, Conducting Conformations of the Selectivity Filter in Shaker K+ Channels

2005 ◽  
Vol 125 (6) ◽  
pp. 619-629 ◽  
Author(s):  
Jill Thompson ◽  
Ted Begenisich
Keyword(s):  
Voltage Dependence ◽  
Relative Proportion ◽  
Selectivity Filter ◽  
K Channel ◽  
K Channels ◽  
High Affinity ◽  
K Concentration ◽  
The One ◽  
Low K ◽  
Two Populations

We have examined the voltage dependence of external TEA block of Shaker K+ channels over a range of internal K+ concentrations from 2 to 135 mM. We found that the concentration dependence of external TEA block in low internal K+ solutions could not be described by a single TEA binding affinity. The deviation from a single TEA binding isotherm was increased at more depolarized membrane voltages. The data were well described by a two-component binding scheme representing two, relatively stable populations of conducting channels that differ in their affinity for external TEA. The relative proportion of these two populations was not much affected by membrane voltage but did depend on the internal K+ concentration. Low internal K+ promoted an increase in the fraction of channels with a low TEA affinity. The voltage dependence of the apparent high-affinity TEA binding constant depended on the internal K+ concentration, becoming almost voltage independent in 5 mM. The K+ sensitivity of these low- and high-affinity TEA states suggests that they may represent one- and two-ion occupancy states of the selectivity filter, consistent with recent crystallographic results from the bacterial KcsA K+ channel. We therefore analyzed these data in terms of such a model and found a large (almost 14-fold) difference between the intrinsic TEA affinity of the one-ion and two-ion modes. According to this analysis, the single ion in the one-ion mode (at 0 mV) prefers the inner end of the selectivity filter twofold more than the outer end. This distribution does not change with internal K+. The two ions in the two-ion mode prefer to occupy the inner end of the selectivity filter at low K+, but high internal K+ promotes increased occupancy of the outer sites. Our analysis further suggests that the four K+ sites in the selectivity filter are spaced between 20 and 25% of the membrane electric field.

Novel actions of ryanodine and analogues—Perturbers of potassium channels

1995 ◽  
Vol 15 (6) ◽  
pp. 515-530 ◽  
Author(s):  
H. Vais ◽  
P. N. R. Usherwood
Keyword(s):  
Voltage Dependence ◽  
Reversal Potential ◽  
Bk Channel ◽  
Muscle Membrane ◽  
K Channel ◽  
Similar Data ◽  
Ionic Selectivity ◽  
K Channels ◽  
Quaternary Ammonium Ions ◽  
Ik Channel

The effects of ryanodine, 9,21-didehydroryanodine and 9,21-didehydroryanodol on two types of K+ channel (a maxi, Ca2+-activated, 170 pS channel (BK channel) and an inward rectifier, stretch-sensitive channel of 35 pS conductance (IK channel) found in the plasma membrane of locust skeletal muscle have been investigated. 10−9M-10−5M ryanodine irreversibly induced a dose-dependent reduction of the reversal potential (Vrev) of the currents of both channels, i.e. from ~60 mV in the absence of the alkaloid to ~15 mV for 10−5M ryanodine, measured under physiologically normal K+ and Na+ gradients. In both cases the change in the ionic selectivity was Ca2+-independent. 9,21-didehydroryanodine and 9,21-didehyroryanodol also reduced Vrev, but only to ~35 mV during application of 10−5M of these compounds. Additionally, 9,21-didehydroryanodine reversibly diminished the conductances of the two K+ channels. To test the hypothesis that ryanoids increase Na+ permeability by enlarging the K+ channels, the channels were probed with quaternary ammonium ions during ryanoid application. When applied to the cytoplasmic face of inside-out patches exised from locust muscle membrane, TEA blocked the K+ channels in a voltage-dependent fashion. The dissociation constant (Kd(0)) for TEA block of the IK channel was reduced from 44 mM to 1 mM by 10−7 M ryanodine, but the voltage-dependence of the block was unaffected. Qualitatively similar data were obtained for the BK channel. Ryanodine had no effect on the Kd for cytoplasmically-applied TMA. However, the voltage-dependence for TMA block was increased for both K+ channels, from 0.47 to ~0.8 with 10−6M ryanodine. The effects of ryanodine on TEA and TMA block support the hypothesis that ryanodine enlarges the K+ channels so as to facilitate permeation of partially hydrated Na+ ions.

scholarly journals Structural basis of ion permeation gating in Slo2.1 K+ channels

2013 ◽  
Vol 142 (5) ◽  
pp. 523-542 ◽  
Author(s):  
Priyanka Garg ◽  
Alison Gardner ◽  
Vivek Garg ◽  
Michael C. Sanguinetti
Keyword(s):  
Selectivity Filter ◽  
Structural Basis ◽  
K Channel ◽  
Xenopus Laevis Oocytes ◽  
Ion Permeation ◽  
Channel Activation ◽  
K Channels ◽  
Voltage Gated ◽  
Channel Function ◽  
Activation Gate

The activation gate of ion channels controls the transmembrane flux of permeant ions. In voltage-gated K+ channels, the aperture formed by the S6 bundle crossing can widen to open or narrow to close the ion permeation pathway, whereas the selectivity filter gates ion flux in cyclic-nucleotide gated (CNG) and Slo1 channels. Here we explore the structural basis of the activation gate for Slo2.1, a weakly voltage-dependent K+ channel that is activated by intracellular Na+ and Cl−. Slo2.1 channels were heterologously expressed in Xenopus laevis oocytes and activated by elevated [NaCl]i or extracellular application of niflumic acid. In contrast to other voltage-gated channels, Slo2.1 was blocked by verapamil in an activation-independent manner, implying that the S6 bundle crossing does not gate the access of verapamil to its central cavity binding site. The structural basis of Slo2.1 activation was probed by Ala scanning mutagenesis of the S6 segment and by mutation of selected residues in the pore helix and S5 segment. Mutation to Ala of three S6 residues caused reduced trafficking of channels to the cell surface and partial (K256A, I263A, Q273A) or complete loss (E275A) of channel function. P271A Slo2.1 channels trafficked normally, but were nonfunctional. Further mutagenesis and intragenic rescue by second site mutations suggest that Pro271 and Glu275 maintain the inner pore in an open configuration by preventing formation of a tight S6 bundle crossing. Mutation of several residues in S6 and S5 predicted by homology modeling to contact residues in the pore helix induced a gain of channel function. Substitution of the pore helix residue Phe240 with polar residues induced constitutive channel activation. Together these findings suggest that (1) the selectivity filter and not the bundle crossing gates ion permeation and (2) dynamic coupling between the pore helix and the S5 and S6 segments mediates Slo2.1 channel activation.

Pathways for K+ transport across the bovine articular chondrocyte membrane and their sensitivity to cell volume

1996 ◽  
Vol 270 (5) ◽  
pp. C1300-C1310 ◽  
Author(s):  
A. C. Hall ◽  
I. Starks ◽  
C. L. Shoults ◽  
S. Rashidbigi
Keyword(s):  
Cell Volume ◽  
Maximum Velocity ◽  
Cell Types ◽  
Detectable Effect ◽  
Articular Chondrocyte ◽  
Cell Shrinkage ◽  
Michaelis Constant ◽  
Transport Pathways ◽  
K Channels ◽  
K Transport

The contributions of various K+ transport pathways in bovine chondrocytes isolated from articular cartilage and their responses to changes in cell volume have been studied. K+(86Rb+) uptake mediated by the Na(+)-K(+) pump and Na(+)-K(+)-2Cl- cotransporter were stimulated by cell shrinkage, the latter as part of the regulatory volume increases (RVI) response, the former as an indirect effect resulting from the rise in intracellular Na+ concentration during RVI. For both transporters, there was an increase in the maximum velocity with no detectable effect on the Michaelis constant. There was no evidence for volume-sensitive K+ transport mediated by the K(+)-Cl- cotransporter, or Ca(2+)-activated K+ channels. However, chondrocyte swelling stimulated a ouabain- and bumetanide-insensitive K+ flux sensitive to pimozide and other drugs, which exhibited some of the properties of the relatively nonspecific volume-sensitive "osmolyte" channel described in other cell types.

scholarly journals Effect of Phosphatidylserine on Unitary Conductance and Ba2+ Block of the BK Ca2+–activated K+ Channel

2003 ◽  
Vol 121 (5) ◽  
pp. 375-398 ◽  
Author(s):  
Jin Bong Park ◽  
Hee Jeong Kim ◽  
Pan Dong Ryu ◽  
Edward Moczydlowski
Keyword(s):  
Surface Charge ◽  
Conformational Changes ◽  
Bk Channels ◽  
Bk Channel ◽  
K Channel ◽  
Model Calculations ◽  
Planar Bilayers ◽  
Unitary Conductance ◽  
Lipid Surface ◽  
K Concentration

Incorporation of BK Ca2+–activated K+ channels into planar bilayers composed of negatively charged phospholipids such as phosphatidylserine (PS) or phosphatidylinositol (PI) results in a large enhancement of unitary conductance (gch) in comparison to BK channels in bilayers formed from the neutral zwitterionic lipid, phospatidylethanolamine (PE). Enhancement of gch by PS or PI is inversely dependent on KCl concentration, decreasing from 70% at 10 mM KCl to 8% at 1,000 mM KCl. This effect was explained previously by a surface charge hypothesis (Moczydlowski, E., O. Alvarez, C. Vergara, and R. Latorre. 1985. J. Membr. Biol. 83:273–282), which attributed the conductance enhancement to an increase in local K+ concentration near the entryways of the channel. To test this hypothesis, we measured the kinetics of block by external and internal Ba2+, a divalent cation that is expected to respond strongly to changes in surface electrostatics. We observed little or no effect of PS on discrete blocking kinetics by external and internal Ba2+ at 100 mM KCl and only a small enhancement of discrete and fast block by external Ba2+ in PS-containing membranes at 20 mM KCl. Model calculations of effective surface potential sensed by the K+ conduction and Ba2+-blocking reactions using the Gouy-Chapman-Stern theory of lipid surface charge do not lend support to a simple electrostatic mechanism that predicts valence-dependent increase of local cation concentration. The results imply that the conduction pore of the BK channel is electrostatically insulated from the lipid surface, presumably by a lateral distance of separation (>20 Å) from the lipid head groups. The lack of effect of PS on apparent association and dissociation rates of Ba2+ suggest that lipid modulation of K+ conductance is preferentially coupled through conformational changes of the selectivity filter region that determine the high K+ flux rate of this channel relative to other cations. We discuss possible mechanisms for the effect of anionic lipids in the context of specific molecular interactions of phospholipids documented for the KcsA bacterial potassium channel and general membrane physical properties proposed to regulate membrane protein conformation via energetics of bilayer stress.

Potassium and Sodium Ions Complexes with a Partial Peptide of the Selectivity Filter in K+ Channels Studied by Cold Ion Trap Infrared Spectroscopy: Effect of Hydration

2021 ◽  
Author(s):  
Takumi Negoro ◽  
Keisuke Hirata ◽  
James M. Lisy ◽  
Shun-ichi Ishiuchi ◽  
Masaaki Fujii
Keyword(s):  
Infrared Spectroscopy ◽  
Potassium Channels ◽  
Ion Trap ◽  
Selectivity Filter ◽  
Sodium Ions ◽  
K Channels ◽  
Ion Translocation

Potassium channels allow K+ to rapidly diffuse, while the selectivity filter (SF) actively blocks Na+. The presence of water in the SF during ion translocation remains under debate due the...

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