scholarly journals p53 protein at the hub of cellular DNA damage response pathways through sequence-specific and non-sequence-specific DNA binding

2001 ◽  
Vol 22 (6) ◽  
pp. 851-860 ◽  
Author(s):  
Y. Liu
Blood ◽  
2011 ◽  
Vol 118 (21) ◽  
pp. 299-299
Author(s):  
Maria Gkotzamanidou ◽  
Evangelos Terpos ◽  
Petros P. Sfikakis ◽  
Meletios Athanasios Dimopoulos ◽  
Vassilis L. Souliotis

Abstract Abstract 299 The aim of this study was to evaluate epigenetic modifications and alterations in cellular DNA damage response pathways that may be implicated in the multistep transformation of myelomagenesis. Peripheral blood mononuclear cells (PBMCs) and plasma cells from bone marrow aspirates were collected from 15 patients with MGUS (8M/7F), 22 with asymptomatic MM (AMM; 10M/12F), 41 patients with symptomatic MM (16M/25F) who underwent autologous stem cell transplantation as part of their first line therapy, and 12 healthy volunteers (7M/5F; only PBMCs). Epigenetics (chromatin condensation, transcription activity) and DNA damage response pathways (melphalan-induced DNA damage formation/repair in four genomic loci including beta-actin, p53, N-ras and delta-globin genes, accumulation of p53 protein and induction of apoptosis) were evaluated. In both PBMCs and plasma cells and in all genomic regions analyzed, significant differences in the local chromatin looseness between the different groups of patients were observed: healthy volunteers<MGUS<AMM<MM (p<0.02 for all comparisons). In PBMCs and plasma cells from all subjects, beta-actin, p53 and N-ras genes were transcriptionally active, while delta-globin gene was silent in all samples from healthy volunteers and MGUS patients. Notably, an induction of the transcription activity of delta-globin gene was found in 10/22 (45.5%) of AMM and 32/41 (78%) of symptomatic MM patients. Following a 5-min treatment of PBMCs with 100μg/ml melphalan or plasma cells with 35μg/ml, the efficiency of DNA damage repair inside all genes analysed was in accordance with that of chromatin condensation and gene expression efficiency at the same genomic loci: healthy volunteers<MGUS<AMM<MM (p<0.04 for all comparisons). In particular, in the N-ras gene, PBMCs from healthy volunteers showed 128.6±38.6 adducts/106 nucleotides, from MGUS patients 114.3±26.7 adducts/106nucleotides, from AMM 96.7±20.9 adducts/106nucleotides, and from symptomatic MM patients 56.6±27.2 adducts/106nucleotides. Similarly, plasma cells from MGUS patients showed 95.7±25.0 adducts/106nucleotides, from AMM patients 70.3±21.9 adducts/106nucleotides, and from symptomatic MM patients 32.3±10.2 adducts/106nucleotides. There was a strong correlation for the DNA damage repair data between PBMCs and plasma cells from the same individuals (R2=0.60, p<0.001). Moreover, following a 5-min exposure of PBMCs and plasma cells with various doses of melphalan (0–120μg/ml), we found that PBMCs from healthy volunteers showed evidence of p53 protein accumulation at melphalan doses as low as 17.9±8.7 μg/ml, from MGUS patients at 29.7±12.5 μg/ml, from AMM patients at 65.6±23.8 μg/ml, and from symptomatic MM patients at 100.2±29.7 μg/ml. Plasma cells from MGUS patients showed evidence of p53 protein accumulation at melphalan doses as low as 20.2±8.9 μg/ml, from AMM patients at 35.2±14.3 μg/ml, while from symptomatic MM patients at 55.3±23.1 μg/ml (p<0.02 for all comparisons). Linear association for the p53 results between PBMCs and plasma cells from the same individuals was observed (R2=0.65, p<0.001). Also, PBMCs and plasma cells were treated with various doses of melphalan (0–120 μg/ml) for 5 min, and the induction of apoptosis was measured 24h later. In accordance with the p53 data, PBMCs from healthy volunteers showed evidence of induction of apoptosis at melphalan doses as low as 13.2±6.9 μg/ml, from MGUS patients at 20.6±10.8 μg/ml, from AMM patients at 51.4±20.3 μg/ml, and from symptomatic MM patients at 89.7±25.1 μg/ml. Plasma cells from MGUS patients showed induction of apoptosis at melphalan doses as low as 9.9±2.9 μg/ml, from AMM patients at 25.3±8.5 μg/ml, and from symptomatic MM patients at 45.2±19.4 μg/ml (p<0.01 for all comparisons). For apoptosis data, a strong correlation was also found between PBMCs and plasma cells from the same individuals (R2=0.61, p<0.001). In conclusion, our data indicate that myelomagenesis is associated with epigenetic alterations and modifications in the cellular DNA damage response pathways that can be used as novel molecular biomarkers for early diagnosis and prediction of clinical outcome in MM. Furthermore, in all end-points examined, a strong association between PBMCs and plasma cells from the same individuals was observed, suggesting that measurement of these novel molecular biomarkers can be performed in a readily accessible tissue such as PBMCs. Disclosures: No relevant conflicts of interest to declare.


2021 ◽  
Author(s):  
Kerry Silva McPherson ◽  
Dmitry Korzhnev

Cellular DNA damage response (DDR) is an extensive signaling network that orchestrates DNA damage recognition, repair and avoidance, cell cycle progression and cell death. DDR alternation is a hallmark of...


2005 ◽  
Vol 79 (13) ◽  
pp. 8243-8248 ◽  
Author(s):  
Sara Klucking ◽  
Asha S. Collins ◽  
John A. T. Young

ABSTRACT The cytopathic effect (CPE) seen with some subgroups of avian sarcoma and leukosis virus (ASLV) is associated with viral Env activation of the death-promoting activity of TVB (a tumor necrosis factor receptor-related receptor that is most closely related to mammalian TNF-related apoptosis-inducing ligand [TRAIL] receptors) and with viral superinfection leading to unintegrated viral DNA (UVD) accumulation, which is presumed to activate a cellular DNA damage response. In this study, we employed cells that express signaling-deficient ASLV receptors to demonstrate that an ASLV CPE can be uncoupled from the death-promoting functions of the TVB receptor. However, these cell-killing events were associated with much higher levels of viral superinfection and DNA accumulation than those seen when the virus used signaling-competent TVB receptors. These findings suggest that a putative cellular DNA damage response that is activated by UVD accumulation might act in concert with the death-signaling pathways activated by Env-TVB interactions to trigger cell death. Such a model is consistent with the well-established synergy that exists between TRAIL-signaling pathways and DNA damage responses which is currently being exploited in cancer therapy regimens.


Oncotarget ◽  
2015 ◽  
Vol 6 (33) ◽  
pp. 34979-34991 ◽  
Author(s):  
Yuezhen Xue ◽  
Shen Yon Toh ◽  
Pingping He ◽  
Thimothy Lim ◽  
Diana Lim ◽  
...  

Viruses ◽  
2019 ◽  
Vol 11 (10) ◽  
pp. 938 ◽  
Author(s):  
Risso-Ballester ◽  
Sanjuán

Most DNA viruses exhibit relatively low rates of spontaneous mutation. However, the molecular mechanisms underlying DNA virus genetic stability remain unclear. In principle, mutation rates should not depend solely on polymerase fidelity, but also on factors such as DNA damage and repair efficiency. Most eukaryotic DNA viruses interact with the cellular DNA damage response (DDR), but the role of DDR pathways in preventing mutations in the virus has not been tested empirically. To address this goal, we serially transferred human adenovirus type 5 in cells in which the telangiectasia-mutated PI3K-related protein kinase (ATM), the ATM/Rad3-related (ATR) kinase, and the DNA-dependent protein kinase (DNA-PK) were chemically inactivated, as well as in control cells displaying normal DDR pathway functioning. High-fidelity deep sequencing of these viral populations revealed mutation frequencies in the order of one-millionth, with no detectable effect of the inactivation of DDR mediators ATM, ATR, and DNA-PK on adenovirus sequence variability. This suggests that these DDR pathways do not play a major role in determining adenovirus genetic diversity.


2020 ◽  
Vol 11 ◽  
Author(s):  
Xiaoqiao Yue ◽  
Chenjun Bai ◽  
Dafei Xie ◽  
Teng Ma ◽  
Ping-Kun Zhou

DNA-dependent protein kinase catalytic subunit (DNA-PKcs) is a member of the phosphatidylinositol 3-kinase related kinase family, which can phosphorylate more than 700 substrates. As the core enzyme, DNA-PKcs forms the active DNA-PK holoenzyme with the Ku80/Ku70 heterodimer to play crucial roles in cellular DNA damage response (DDR). Once DNA double strand breaks (DSBs) occur in the cells, DNA-PKcs is promptly recruited into damage sites and activated. DNA-PKcs is auto-phosphorylated and phosphorylated by Ataxia-Telangiectasia Mutated at multiple sites, and phosphorylates other targets, participating in a series of DDR and repair processes, which determine the cells’ fates: DSBs NHEJ repair and pathway choice, replication stress response, cell cycle checkpoints, telomeres length maintenance, senescence, autophagy, etc. Due to the special and multi-faceted roles of DNA-PKcs in the cellular responses to DNA damage, it is important to precisely regulate the formation and dynamic of its functional complex and activities for guarding genomic stability. On the other hand, targeting DNA-PKcs has been considered as a promising strategy of exploring novel radiosensitizers and killing agents of cancer cells. Combining DNA-PKcs inhibitors with radiotherapy can effectively enhance the efficacy of radiotherapy, offering more possibilities for cancer therapy.


2017 ◽  
Author(s):  
Iqra Nadeem ◽  
Amna Aslam ◽  
Jingyuan Wang ◽  
Anna Kozlova ◽  
Danielle Gordon ◽  
...  

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