scholarly journals A Role for the Swe1 Checkpoint Kinase During Filamentous Growth of Saccharomyces cerevisiae

Genetics ◽  
2001 ◽  
Vol 158 (2) ◽  
pp. 549-562
Author(s):  
Roberto La Valle ◽  
Curt Wittenberg
Keyword(s):  
Solid Medium ◽  
Nitrogen Starvation ◽  
Filamentous Growth ◽  
Related Phenomenon ◽  
Morphological Response ◽  
Pseudohyphal Growth ◽  
Standard Assay ◽  
Diploid Cells ◽  
Pseudohyphal Differentiation ◽  
Assay Conditions

Abstract In this study we show that inactivation of Hsl1 or Hsl7, negative regulators of the Swe1 kinase, enhances the invasive behavior of haploid and diploid cells. The enhancement of filamentous growth caused by inactivation of both genes is mediated via the Swe1 protein kinase. Whereas Swe1 contributes noticeably to the effectiveness of haploid invasive growth under all conditions tested, its contribution to pseudohyphal growth is limited to the morphological response under standard assay conditions. However, Swe1 is essential for pseudohyphal differentiation under a number of nonstandard assay conditions including altered temperature and increased nitrogen. Swe1 is also required for pseudohyphal growth in the absence of Tec1 and for the induction of filamentation by butanol, a related phenomenon. Although inactivation of Hsl1 is sufficient to suppress the defect in filamentous growth caused by inactivation of Tec1 or Flo8, it is insufficient to promote filamentous growth in the absence of both factors. Moreover, inactivation of Hsl1 will not bypass the requirement for nitrogen starvation or growth on solid medium for pseudohyphal differentiation. We conclude that the Swe1 kinase modulates filamentous development under a broad spectrum of conditions and that its role is partially redundant with the Tec1 and Flo8 transcription factors.

Regulation of dimorphism in Saccharomyces cerevisiae: involvement of the novel protein kinase homolog Elm1p and protein phosphatase 2A

1993 ◽  
Vol 13 (9) ◽  
pp. 5567-5581
Author(s):  
M J Blacketer ◽  
C M Koehler ◽  
S G Coats ◽  
A M Myers ◽  
P Madaule
Keyword(s):  
Saccharomyces Cerevisiae ◽  
Protein Kinase ◽  
Protein Phosphatase ◽  
Nitrogen Starvation ◽  
Gene Dosage ◽  
Protein Phosphatase 2A ◽  
Pseudohyphal Growth ◽  
Phosphatase 2A ◽  
Pseudohyphal Differentiation ◽  
Novel Protein

The Saccharomyces cerevisiae genes ELM1, ELM2, and ELM3 were identified on the basis of the phenotype of constitutive cell elongation. Mutations in any of these genes cause a dimorphic transition to a pseudohyphal growth state characterized by formation of expanded, branched chains of elongated cells. Furthermore, elm1, elm2, and elm3 mutations cause cells to grow invasively under the surface of agar medium. S. cerevisiae is known to be a dimorphic organism that grows either as a unicellular yeast or as filamentous cells termed pseudohyphae; although the yeast-like form usually prevails, pseudohyphal growth may occur during conditions of nitrogen starvation. The morphologic and physiological properties caused by elm1, elm2, and elm3 mutations closely mimic pseudohyphal growth occurring in conditions of nitrogen starvation. Therefore, we propose that absence of ELM1, ELM2, or ELM3 function causes constitutive execution of the pseudohyphal differentiation pathway that occurs normally in conditions of nitrogen starvation. Supporting this hypothesis, heterozygosity at the ELM2 or ELM3 locus significantly stimulated the ability to form pseudohyphae in response to nitrogen starvation. ELM1 was isolated and shown to code for a novel protein kinase homolog. Gene dosage experiments also showed that pseudohyphal differentiation in response to nitrogen starvation is dependent on the product of CDC55, a putative B regulatory subunit of protein phosphatase 2A, and a synthetic phenotype was observed in elm1 cdc55 double mutants. Thus, protein phosphorylation is likely to regulate differentiation into the pseudohyphal state.

scholarly journals Regulation of dimorphism in Saccharomyces cerevisiae: involvement of the novel protein kinase homolog Elm1p and protein phosphatase 2A.

1993 ◽  
Vol 13 (9) ◽  
pp. 5567-5581 ◽  
Author(s):  
M J Blacketer ◽  
C M Koehler ◽  
S G Coats ◽  
A M Myers ◽  
P Madaule
Keyword(s):  
Saccharomyces Cerevisiae ◽  
Protein Kinase ◽  
Protein Phosphatase ◽  
Nitrogen Starvation ◽  
Gene Dosage ◽  
Protein Phosphatase 2A ◽  
Pseudohyphal Growth ◽  
Phosphatase 2A ◽  
Pseudohyphal Differentiation ◽  
Novel Protein

The Saccharomyces cerevisiae genes ELM1, ELM2, and ELM3 were identified on the basis of the phenotype of constitutive cell elongation. Mutations in any of these genes cause a dimorphic transition to a pseudohyphal growth state characterized by formation of expanded, branched chains of elongated cells. Furthermore, elm1, elm2, and elm3 mutations cause cells to grow invasively under the surface of agar medium. S. cerevisiae is known to be a dimorphic organism that grows either as a unicellular yeast or as filamentous cells termed pseudohyphae; although the yeast-like form usually prevails, pseudohyphal growth may occur during conditions of nitrogen starvation. The morphologic and physiological properties caused by elm1, elm2, and elm3 mutations closely mimic pseudohyphal growth occurring in conditions of nitrogen starvation. Therefore, we propose that absence of ELM1, ELM2, or ELM3 function causes constitutive execution of the pseudohyphal differentiation pathway that occurs normally in conditions of nitrogen starvation. Supporting this hypothesis, heterozygosity at the ELM2 or ELM3 locus significantly stimulated the ability to form pseudohyphae in response to nitrogen starvation. ELM1 was isolated and shown to code for a novel protein kinase homolog. Gene dosage experiments also showed that pseudohyphal differentiation in response to nitrogen starvation is dependent on the product of CDC55, a putative B regulatory subunit of protein phosphatase 2A, and a synthetic phenotype was observed in elm1 cdc55 double mutants. Thus, protein phosphorylation is likely to regulate differentiation into the pseudohyphal state.

scholarly journals Pseudohyphal differentiation in Komagataella phaffii: investigating the FLO gene family

2020 ◽  
Vol 20 (5) ◽  
Author(s):  
Sonakshi De ◽  
Corinna Rebnegger ◽  
Josef Moser ◽  
Nadine Tatto ◽  
Alexandra B Graf ◽  
...  
Keyword(s):  
Gene Family ◽  
Nitrogen Starvation ◽  
Slow Growth ◽  
Transcriptional Analysis ◽  
Glucose Limitation ◽  
Pseudohyphal Growth ◽  
Komagataella Phaffii ◽  
Fusel Alcohols ◽  
Adverse Environmental Conditions ◽  
Pseudohyphal Differentiation

ABSTRACT Many yeasts differentiate into multicellular phenotypes in adverse environmental conditions. Here, we investigate pseudohyphal growth in Komagataella phaffii and the involvement of the flocculin (FLO) gene family in its regulation. The K. phaffii FLO family consists of 13 members, and the conditions inducing pseudohyphal growth are different from Saccharomyces cerevisiae. So far, this phenotype was only observed when K. phaffii was cultivated at slow growth rates in glucose-limited chemostats, but not upon nitrogen starvation or the presence of fusel alcohols. Transcriptional analysis identified that FLO11, FLO400 and FLO5-1 are involved in the phenotype, all being controlled by the transcriptional regulator Flo8. The three genes exhibit a complex mechanism of expression and repression during transition from yeast to pseudohyphal form. Unlike in S. cerevisiae, deletion of FLO11 does not completely prevent the phenotype. In contrast, deletion of FLO400 or FLO5-1 prevents pseudohyphae formation, and hampers FLO11 expression. FAIRE-Seq data shows that the expression and repression of FLO400 and FLO5-1 are correlated to open or closed chromatin regions upstream of these genes, respectively. Our findings indicate that K. phaffii Flo400 and/or Flo5-1 act as upstream signals that lead to the induction of FLO11 upon glucose limitation in chemostats at slow growth and chromatin modulation is involved in the regulation of their expression.

scholarly journals Signal Transduction Cascades Regulating Fungal Development and Virulence

2000 ◽  
Vol 64 (4) ◽  
pp. 746-785 ◽  
Author(s):  
Klaus B. Lengeler ◽  
Robert C. Davidson ◽  
Cletus D'souza ◽  
Toshiaki Harashima ◽  
Wei-Chiang Shen ◽  
...  
Keyword(s):  
Signal Transduction ◽  
Fungal Pathogens ◽  
Filamentous Growth ◽  
Mitogen Activated Protein Kinase ◽  
Signaling Cascades ◽  
Yeast Saccharomyces Cerevisiae ◽  
Mitogen Activated Protein ◽  
Kinase Cascade ◽  
Diploid Cells ◽  
Pseudohyphal Differentiation

SUMMARY Cellular differentiation, mating, and filamentous growth are regulated in many fungi by environmental and nutritional signals. For example, in response to nitrogen limitation, diploid cells of the yeast Saccharomyces cerevisiae undergo a dimorphic transition to filamentous growth referred to as pseudohyphal differentiation. Yeast filamentous growth is regulated, in part, by two conserved signal transduction cascades: a mitogen-activated protein kinase cascade and a G-protein regulated cyclic AMP signaling pathway. Related signaling cascades play an analogous role in regulating mating and virulence in the plant fungal pathogen Ustilago maydis and the human fungal pathogens Cryptococcus neoformans and Candida albicans. We review here studies on the signaling cascades that regulate development of these and other fungi. This analysis illustrates both how the model yeast S. cerevisiae can serve as a paradigm for signaling in other organisms and also how studies in other fungi provide insights into conserved signaling pathways that operate in many divergent organisms.

Carboxymethylhydroxymuconic semialdehyde dehydrogenase in the 4-hydroxyphenylacetate catabolic pathway of Pseudomonas putida

1986 ◽  
Vol 64 (12) ◽  
pp. 1288-1293 ◽  
Author(s):  
Josefa M. Alonso ◽  
Amando Garrido-Pertierra
Keyword(s):  
Pseudomonas Putida ◽  
Polyacrylamide Gel Electrophoresis ◽  
Sodium Dodecyl ◽  
Gel Filtration ◽  
Competitive Inhibitor ◽  
Catabolic Pathway ◽  
Ph Optimum ◽  
Semialdehyde Dehydrogenase ◽  
Standard Assay ◽  
Assay Conditions

5-Carboxymethyl-2-hydroxymuconic semialdehyde (CHMSA) dehydrogenase in the 4-hydroxyphenylacetate meta-cleavage pathway was purified from Pseudomonas putida by gel filtration, anion-exchange, and affinity chromatographies. Sodium dodecyl sulfate – polyacrylamide gel electrophoresis analysis suggested an approximate tetrameric molecular weight of 200 000. The purified enzyme showed a pH optimum at 7.8. The temperature–activity relationship for the enzyme from 27 to 45 °C showed broken Arrhenius plots with an inflexion at 36–37 °C. Under standard assay conditions, the enzyme acted preferentially with NAD. It could also catalyze the reduction with NADP (which had a higher Km), at 18% of the rate observed for NAD. The following kinetic parameters were found: Km(NAD) = 20.0 ± 3.6 μM, Km(CHMSA) = 8.5 ± 1.8 μM, and Kd(enzyme–NAD complex) = 7.8 ± 2.0 μM. The product NADH acted as a competitive inhibitor against NAD.

scholarly journals The TOR Signal Transduction Cascade Controls Cellular Differentiation in Response to Nutrients

2001 ◽  
Vol 12 (12) ◽  
pp. 4103-4113 ◽  
Author(s):  
N. Shane Cutler ◽  
Xuewen Pan ◽  
Joseph Heitman ◽  
Maria E. Cardenas
Keyword(s):  
Signal Transduction ◽  
Protein Kinases ◽  
Protein Phosphatase ◽  
Nutrient Sensing ◽  
Yeast Cells ◽  
Regulatory Subunit ◽  
Growth Defect ◽  
Tor Pathway ◽  
Pseudohyphal Growth ◽  
Pseudohyphal Differentiation

Rapamycin binds and inhibits the Tor protein kinases, which function in a nutrient-sensing signal transduction pathway that has been conserved from the yeast Saccharomyces cerevisiaeto humans. In yeast cells, the Tor pathway has been implicated in regulating cellular responses to nutrients, including proliferation, translation, transcription, autophagy, and ribosome biogenesis. We report here that rapamycin inhibits pseudohyphal filamentous differentiation of S. cerevisiae in response to nitrogen limitation. Overexpression of Tap42, a protein phosphatase regulatory subunit, restored pseudohyphal growth in cells exposed to rapamycin. The tap42-11 mutation compromised pseudohyphal differentiation and rendered it resistant to rapamycin. Cells lacking the Tap42-regulated protein phosphatase Sit4 exhibited a pseudohyphal growth defect and were markedly hypersensitive to rapamycin. Mutations in other Tap42-regulated phosphatases had no effect on pseudohyphal differentiation. Our findings support a model in which pseudohyphal differentiation is controlled by a nutrient-sensing pathway involving the Tor protein kinases and the Tap42–Sit4 protein phosphatase. Activation of the MAP kinase or cAMP pathways, or mutation of the Sok2 repressor, restored filamentation in rapamycin treated cells, supporting models in which the Tor pathway acts in parallel with these known pathways. Filamentous differentiation of diverse fungi was also blocked by rapamycin, demonstrating that the Tor signaling cascade plays a conserved role in regulating filamentous differentiation in response to nutrients.

Trehalose pathway regulates filamentation response in Saccharomyces cerevisiae

2021 ◽  
Author(s):  
Revathi Iyer ◽  
Paike Jayadeva Bhat
Keyword(s):  
Cell Fate ◽  
The Novel ◽  
Cell Fate Decision ◽  
Carbon And Nitrogen ◽  
Source Depletion ◽  
Fate Decision ◽  
Diploid Cells ◽  
Opposing Effects ◽  
Pseudohyphal Differentiation ◽  
Glucose Condition

Abstract In Saccharomyces cerevisae , the diploid cells undergo either pseudohyphal differentiation or sporulation in response to carbon and nitrogen source depletion. Distinct pathways are known to regulate the processes of filamentation and sporulation in response to nutritional stress. Here, we report the novel finding that the trehalose pathway which is essential for sporulation, is involved in pseudohyphae formation both via GPR1 as well as RAS2 mediated signaling. Our observations indicate that GPR1 is epistatic over TPS1 in signaling for filamentation. Further, we have demonstrated that the pseudohyphal defect of the ras2 mutant is overcome upon disruption of TPS2 . Thus, our results indicate that TPS1 and TPS2 may be involved in cell fate decision between meiosis and filamentation response under nutrient depleting conditions. Further, monitoring pseudohyphae formation under limiting glucose condition unravelled the possibility that TPS1 and TPS2 exert opposing effects to trigger filamentation response.

GST2 is Required for Nitrogen Starvation-Induced Filamentous Growth in Candida albicans

2014 ◽  
Vol 24 (9) ◽  
pp. 1207-1215 ◽  
Author(s):  
So-Hyoung Lee ◽  
Soon-Chun Chung ◽  
Jongheon Shin ◽  
Ki-Bong Oh
Keyword(s):  
Candida Albicans ◽  
Nitrogen Starvation ◽  
Filamentous Growth

Effect of 2,4-D on the Hydrolysis of Diclofop-Methyl in Wild Oat (Avena fatua)

Weed Science ◽  
1980 ◽  
Vol 28 (6) ◽  
pp. 725-729 ◽  
Author(s):  
B. D. Hill ◽  
B. G. Todd ◽  
E. H. Stobbe
Keyword(s):  
Enzyme Preparation ◽  
Avena Fatua ◽  
Wild Oat ◽  
Enzymic Hydrolysis ◽  
Standard Assay ◽  
Rate Of Hydrolysis ◽  
Dichlorophenoxy Acetic Acid ◽  
Hydrolysis Of ◽  
Assay Conditions

The basis for 2,4-D [(2,4-dichlorophenoxy)acetic acid] antagonism of diclofop-methyl {methyl 2-[4-(2,4-dichlorophenoxy) phenoxy] propanoate} toxicity to wild oat (Avena fatuaL.) was investigated by studying changes in the metabolism of diclofop-methyl in vitro. An esterase from wild oat, which hydrolyzes diclofop-methyl to the acid diclofop, was extracted, partially purified, and the reaction characterized. The rate of hydrolysis of14C-diclofop-methyl was 0.14 ηmoles/2 h at standard assay conditions of 0.25 mg lyophilized enzyme preparation (19.6% protein) in 0.1 ml phosphate buffer (0.1 M, pH 7.0), substrate 5 μM. The addition of 2,4-D to this reaction did not inhibit14C-diclofop formation. Higher levels of 2,4-D stimulated enzymic hydrolysis.14C-diclofop-methyl was rapidly metabolized to14C-diclofop and polar14C-conjugates when vacuum-infiltrated into wild oat leaf segments. The addition of 2,4-D caused small increases in the rates of both14C-diclofop-methyl de-esterification and14C-diclofop conjugation. It is concluded that 2,4-D does not inhibit the in vitro de-esterification of diclofop-methyl.

scholarly journals Sok2 Regulates Yeast Pseudohyphal Differentiation via a Transcription Factor Cascade That Regulates Cell-Cell Adhesion

2000 ◽  
Vol 20 (22) ◽  
pp. 8364-8372 ◽  
Author(s):  
Xuewen Pan ◽  
Joseph Heitman
Keyword(s):  
Transcription Factor ◽  
Cell Adhesion ◽  
Surface Protein ◽  
Filamentous Growth ◽  
Northern Analysis ◽  
Regulated Expression ◽  
Mutant Strains ◽  
Genes Encoding ◽  
Genome Array ◽  
Pseudohyphal Differentiation

ABSTRACT In response to nitrogen limitation, Saccharomyces cerevisiae undergoes a dimorphic transition to filamentous pseudohyphal growth. In previous studies, the transcription factor Sok2 was found to negatively regulate pseudohyphal differentiation. By genome array and Northern analysis, we found that genes encoding the transcription factors Phd1, Ash1, and Swi5 were all induced insok2/sok2 hyperfilamentous mutants. In accord with previous studies of others, Swi5 was required for ASH1 expression. Phd1 and Ash1 regulated expression of the cell surface protein Flo11, which is required for filamentous growth, and were largely required for filamentation of sok2/sok2 mutant strains. These findings reveal that a complex transcription factor cascade regulates filamentation. These findings also reveal a novel dual role for the transcription factor Swi5 in regulating filamentous growth. Finally, these studies illustrate how mother-daughter cell adhesion can be accomplished by two distinct mechanisms: one involving Flo11 and the other involving regulation of the endochitinase Cts1 and the endoglucanase Egt2 by Swi5.

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