scholarly journals Light-responsive expression atlas reveals the effects of light quality and intensity in Kalanchoë fedtschenkoi, a plant with crassulacean acid metabolism

GigaScience ◽  
2020 ◽  
Vol 9 (3) ◽  
Author(s):  
Jin Zhang ◽  
Rongbin Hu ◽  
Avinash Sreedasyam ◽  
Travis M Garcia ◽  
Anna Lipzen ◽  
...  
Keyword(s):  
Light Intensity ◽  
White Light ◽  
Crassulacean Acid Metabolism ◽  
Light Quality ◽  
Acid Metabolism ◽  
Easy Access ◽  
Cam Plants ◽  
A Genome ◽  
Acid Accumulation ◽  
Expression Atlas

Abstract Background Crassulacean acid metabolism (CAM), a specialized mode of photosynthesis, enables plant adaptation to water-limited environments and improves photosynthetic efficiency via an inorganic carbon-concentrating mechanism. Kalanchoë fedtschenkoi is an obligate CAM model featuring a relatively small genome and easy stable transformation. However, the molecular responses to light quality and intensity in CAM plants remain understudied. Results Here we present a genome-wide expression atlas of K. fedtschenkoi plants grown under 12 h/12 h photoperiod with different light quality (blue, red, far-red, white light) and intensity (0, 150, 440, and 1,000 μmol m–2 s–1) based on RNA sequencing performed for mature leaf samples collected at dawn (2 h before the light period) and dusk (2 h before the dark period). An eFP web browser was created for easy access of the gene expression data. Based on the expression atlas, we constructed a light-responsive co-expression network to reveal the potential regulatory relationships in K. fedtschenkoi. Measurements of leaf titratable acidity, soluble sugar, and starch turnover provided metabolic indicators of the magnitude of CAM under the different light treatments and were used to provide biological context for the expression dataset. Furthermore, CAM-related subnetworks were highlighted to showcase genes relevant to CAM pathway, circadian clock, and stomatal movement. In comparison with white light, monochrome blue/red/far-red light treatments repressed the expression of several CAM-related genes at dusk, along with a major reduction in acid accumulation. Increasing light intensity from an intermediate level (440 μmol m−2 s−1) of white light to a high light treatment (1,000 μmol m–2 s–1) increased expression of several genes involved in dark CO2 fixation and malate transport at dawn, along with an increase in organic acid accumulation. Conclusions This study provides a useful genomics resource for investigating the molecular mechanism underlying the light regulation of physiology and metabolism in CAM plants. Our results support the hypothesis that both light intensity and light quality can modulate the CAM pathway through regulation of CAM-related genes in K. fedtschenkoi.

scholarly journals CO2 starvation experiments provide support for the carbon-limited hypothesis on the evolution of CAM-like behaviour in Isoëtes

2020 ◽  
Vol 127 (1) ◽  
pp. 135-141
Author(s):  
Jacob S Suissa ◽  
Walton A Green
Keyword(s):  
Aquatic Ecosystems ◽  
Crassulacean Acid Metabolism ◽  
Acid Metabolism ◽  
Selective Pressure ◽  
Atmospheric Co2 ◽  
Terrestrial Plants ◽  
Cam Plants ◽  
Acid Accumulation ◽  
Use Efficiency ◽  
Nocturnal Acid Accumulation

Abstract Background and Aims Crassulacean acid metabolism (CAM) is an adaptation to increase water use efficiency in dry environments. Similar biochemical patterns occur in the aquatic lycophyte genus Isoëtes. It has long been assumed and accepted that CAM-like behaviour in these aquatic plants is an adaptation to low daytime carbon levels in aquatic ecosystems, but this has never been directly tested. Methods To test this hypothesis, populations of Isoëtes engelmannii and I. tuckermanii were grown in climate-controlled chambers and starved of atmospheric CO2 during the day while pH was measured for 24 h. Key Results We demonstrate that terrestrial plants exposed to low atmospheric CO2 display diel acidity cycles similar to those in both xerophytic CAM plants and submerged Isoëtes. Conclusions Daytime CO2 starvation induces CAM-like nocturnal acid accumulation in terrestrial Isoëtes, substantiating the hypothesis that carbon starvation is a selective pressure for this physiological behaviour.

How to tell the time: the regulation of phosphoenolpyruvate carboxylase in Crassulacean acid metabolism (CAM) plants

2003 ◽  
Vol 31 (3) ◽  
pp. 728-730 ◽  
Author(s):  
H.G. Nimmo
Keyword(s):  
Circadian Rhythms ◽  
Phosphoenolpyruvate Carboxylase ◽  
Crassulacean Acid Metabolism ◽  
Acid Metabolism ◽  
Circadian Oscillator ◽  
Cam Plants ◽  
Reversible Phosphorylation ◽  
Circadian Expression ◽  
Phosphoenolpyruvate Carboxylase Kinase ◽  
Co2 Metabolism

Crassulacean acid metabolism (CAM) plants exhibit persistent circadian rhythms of CO2 metabolism. These rhythms are driven by changes in the flux through phosphoenolpyruvate carboxylase, which is regulated by reversible phosphorylation in response to a circadian oscillator. This article reviews progress in our understanding of the circadian expression of phosphoenolpyruvate carboxylase kinase.

Cell organelles from crassulacean acid metabolism (CAM) plants

Planta ◽  
1980 ◽  
Vol 147 (5) ◽  
pp. 477-484 ◽  
Author(s):  
C. Schnarrenberger ◽  
D. Gro� ◽  
Ch. Burkhard ◽  
M. Herbert
Keyword(s):  
Crassulacean Acid Metabolism ◽  
Acid Metabolism ◽  
Cam Plants ◽  
Cell Organelles

Purification and Properties of Phosphoenolpyruvate Carboxylase From Plants With Crassulacean Acid Metabolism

1982 ◽  
Vol 9 (4) ◽  
pp. 409 ◽  
Author(s):  
DL Nott ◽  
CB Osmond
Keyword(s):  
Sodium Dodecyl Sulfate ◽  
Functional Significance ◽  
Crassulacean Acid Metabolism ◽  
Acid Metabolism ◽  
Sodium Dodecyl ◽  
Kinetic Properties ◽  
Cam Plants ◽  
Pep Carboxylase ◽  
Purification And Properties ◽  
Ph Dependent

Phosphoenolpyruvate (PEP) carboxylase was purified from three species of crassulacean acid metabolism (CAM) plants. There was no evidence for isoenzymes of PEP carboxylase in these plants and the purified protein was an active dimer of Mr 220 000-250 000 which dissociated to a monomer of Mr 110 000 after treatment with sodium dodecyl sulfate. Active, higher aggregates could be obtained on Sepharose 6B but the functional significance, if any, of these remains to be assessed. In the absence of effectors, normal Michaelis-Menten kinetics were obtamed with the substrates HCO3- and PEP. The purified enzyme shows a preference for HCO3-, rather than CO2, at pH 6.1 and 8.1, with a Km (HCO3-) of 10-20 �M. The Vmax was relatively independent of pH between pH 5.5 and 8.5, but the Km (PEP) (like most other kinetic properties) was pH dependent with a minimum of about 0.1 mM PEP at pH 6.8. Malate inhibition was more effective at pH 6.2 than at pH 8.2, and the inhibition evidently involved a slow binding of malate which increased the Km (PEP) and resulted in non-hyperbolic kinetics. The Km (PEP) was lowered about 5-10-fold by 1.0 mM glucose 6-phosphate which also overcame malate inhibition and restored hyperbolic kinetic relationships in the presence of malate. Possible roles for these properties in the regulation of CAM are discussed.

Resistance is useful: diurnal patterns of photosynthesis in C3 and crassulacean acid metabolism epiphytic bromeliads

2002 ◽  
Vol 29 (6) ◽  
pp. 679 ◽  
Author(s):  
Kate Maxwell
Keyword(s):  
Crassulacean Acid Metabolism ◽  
Acid Metabolism ◽  
Photosynthetic Electron Transport ◽  
Co2 Assimilation ◽  
Enzyme Activation ◽  
Photon Flux ◽  
Photon Flux Density ◽  
Cam Plants ◽  
Diurnal Patterns ◽  
Rubisco Activation

This paper originates from a presentation at the IIIrd International Congress on Crassulacean Acid Metabolism, Cape Tribulation, Queensland, Australia, August 2001 Diurnal patterns of photosynthesis in response to environmental variables were investigated in an obligate C3 and a facultative C3-crassulacean acid metabolism (CAM) bromeliad species. A midday depression of photosynthesis occurred in both C3 groups, mediated as a decrease in stomatal conductance in response to increased vapour pressure difference. The response was associated with a reduction in Rubisco activation state during the period of maximum photon flux density. In contrast, the switch to CAM resulted in a strong shift in the pattern of Rubisco carbamylation, with full enzyme activation delayed until the midday period. For the first time it is demonstrated that the pattern of Rubisco activation differs between C3 and CAM plants of the same species under identical conditions. Despite large differences in Rubisco content between C3 and CAM plants, neither the amount of Rubisco or enzyme activity is thought to be limiting for photosynthesis, and it is suggested that Rubisco may function as a nitrogen store. Extreme CO2 diffusion limitation resulted in low rates of atmospheric CO2 assimilation that were associated with high rates of photosynthetic electron transport, and it is likely that photorespiration constitutes a significant electron sink over the entire diurnal course. Leaf morphological and physiological adaptations to drought stress are necessary for the epiphytic lifestyle but limit CO2 assimilation and confound the likelihood of high productivity.

Distribution of crassulacean acid metabolism in orchids of Panama: evidence of selection for weak and strong modes

2005 ◽  
Vol 32 (5) ◽  
pp. 397 ◽  
Author(s):  
Katia Silvera ◽  
Louis S. Santiago ◽  
Klaus Winter
Keyword(s):  
Crassulacean Acid Metabolism ◽  
Native Species ◽  
Acid Metabolism ◽  
Carbon Isotopic Composition ◽  
Bimodal Distribution ◽  
Carbon Isotopic ◽  
Acid Accumulation ◽  
Selection For ◽  
Cam Photosynthesis ◽  
Nocturnal Acid Accumulation

Crassulacean acid metabolism (CAM) is one of three metabolic pathways found in vascular plants for the assimilation of carbon dioxide. In this study, we investigate the occurrence of CAM photosynthesis in 200 native orchid species from Panama and 14 non-native species by carbon isotopic composition (δ13C) and compare these values with nocturnal acid accumulation measured by titration in 173 species. Foliar δ13C showed a bimodal distribution with the majority of species exhibiting values of approximately –28‰ (typically associated with the C3 pathway), or –15‰ (strong CAM). Although thick leaves were related to δ13C values in the CAM range, some thin-leaved orchids were capable of CAM photosynthesis, as demonstrated by acid titration. We also found species with C3 isotopic values and significant acid accumulation at night. Of 128 species with δ13C more negative than –22‰, 42 species showed nocturnal acid accumulation per unit fresh mass characteristic of weakly expressed CAM. These data suggest that among CAM orchids, there may be preferential selection for species to exhibit strong CAM or weak CAM, rather than intermediate metabolism.

Effects of photoperiod and drought on the induction of crassulacean acid metabolism and the reproduction of plants of Talinum triangulare

1999 ◽  
Vol 77 (3) ◽  
pp. 404-409 ◽  
Author(s):  
A Herrera
Keyword(s):  
Crassulacean Acid Metabolism ◽  
Reproductive Effort ◽  
Acid Metabolism ◽  
Day Length ◽  
Tropical Species ◽  
Leaf Water Content ◽  
Acid Accumulation ◽  
Nocturnal Acid Accumulation ◽  
Talinum Triangulare ◽  
Short Days

To examine the effects of day length on the induction of crassulacean acid metabolism (CAM) by drought in the tropical species, Talinum triangulare (Jacq.) Willd. (Portulacaceae), plants were subjected to drought under different photoperiods. Nocturnal acid accumulation was 52 µmol H+··g-1 fresh mass (FM) in plants grown under a 10 h light : 14 h dark photoperiod and 76 µmol H+·g-1 FM in plants grown under 13 h light : 11 h dark, whereas it was only 10 µmol H+·g-1 FM in plants grown under 18 h light : 6 h dark. Plants were subjected to drought under short days and under short days with a night interruption of 1.5 h white light, aiming to simulate a long day, while minimally affecting daily carbon balance. Only droughted plants under normal short days accumulated acids during the night. Absence of CAM could not be attributed to differences due to photoperiod in either biomass allocation, chlorophyll content, or leaf water content. Photoperiod did not significantly affect fecundity in watered plants, whereas drought markedly reduced fecundity in plants with night interruption relative to plants under normal short days. Reproductive effort, calculated as seeds per gram leaf, was significantly higher in droughted plants under normal short days and watered plants with and without night interruption than in droughted plants with night interruption.Key words: CAM, crassulacean acid metabolism, drought, fecundity, induction, photoperiod, reproductive effort, reproduction, Talinum triangulare

scholarly journals Phosphoenolpyruvate carboxylase from pennywort (Umbilicus rupestris). Changes in properties after exposure to water stress

1984 ◽  
Vol 218 (2) ◽  
pp. 387-393 ◽  
Author(s):  
P P Daniel ◽  
J A Bryant ◽  
F I Woodward
Keyword(s):  
Water Stress ◽  
Phosphoenolpyruvate Carboxylase ◽  
Crassulacean Acid Metabolism ◽  
Acid Metabolism ◽  
Marked Decrease ◽  
Cam Plants ◽  
Allosteric Inhibitor ◽  
Allosteric Effector ◽  
Incomplete Form ◽  
C3 Photosynthesis

Umbilicus rupestris (pennywort) switches from C3 photosynthesis to an incomplete form of crassulacean acid metabolism (referred to as ‘CAM-idling’) when exposed to water stress (drought). This switch is accompanied by an increase in the activity of phosphoenolpyruvate carboxylase. This enzyme also shows several changes in properties, including a marked decrease in sensitivity to acid pH, a lower Km for phosphoenolpyruvate, very much decreased sensitivity to the allosteric inhibitor malate, and increased responsiveness to the allosteric effector glucose 6-phosphate. The Mr of the enzyme remains unchanged, at approx. 185 000. These changes in properties of phosphoenolpyruvate carboxylase are discussed in relation to the roles of the enzyme in C3 and in CAM plants.

scholarly journals Altered Gene Regulatory Networks are Associated with the Transition from C3 to Crassulacean Acid Metabolism in Erycina (Oncidiinae: Orchidaceae)

2018 ◽  
Author(s):  
Karolina Heyduk ◽  
Michelle Hwang ◽  
Victor A. Albert ◽  
Katia Silvera ◽  
Tianying Lan ◽  
...  
Keyword(s):  
Crassulacean Acid Metabolism ◽  
Regulatory Networks ◽  
Acid Metabolism ◽  
Network Connectivity ◽  
Gene Families ◽  
Multiple Time ◽  
Photosynthetic Pathway ◽  
Cam Plants ◽  
Multiple Time Points ◽  
Cam Photosynthesis

AbstractCrassulacean acid metabolism (CAM) photosynthesis is a modification of the core C3 photosynthetic pathway that improves the ability of plants to assimilate carbon in water-limited environments. CAM plants fix CO2 mostly at night, when transpiration rates are low. All of the CAM pathway genes exist in ancestral C3 species, but the timing and magnitude of expression are greatly altered between C3 and CAM species. Understanding these regulatory changes is key to elucidating the mechanism by which CAM evolved from C3. Here we use two closely related species in the Orchidaceae, Erycina pusilla (CAM) and Erycina crista-galli (C3), to conduct comparative transcriptomic analyses across multiple time points. Clustering of genes with expression variation across the diel cycle revealed some canonical CAM pathway genes similarly expressed in both species, regardless of photosynthetic pathway. However, gene network construction indicated that 149 gene families had significant differences in network connectivity and were further explored for these functional enrichments. Genes involved in light sensing and ABA signaling were some of the most differently connected genes between the C3 and CAM Erycina species, in agreement with the contrasting diel patterns of stomatal conductance in C3 and CAM plants. Our results suggest changes to transcriptional cascades are important for the transition from C3 to CAM photosynthesis in Erycina.

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