PSIV-11 Effects of very low-dose antibiotics on gene expression profiles in ileal mucosa of weaned pigs infected with a pathogenic E. coli

Abstract Our previous studies have shown that supplementation of low-dose antibiotic growth promoter (AGP) exacerbated growth performance and systemic inflammation of weaned pigs infected with pathogenic Escherichia coli (E. coli). The objective of this experiment, which is extension of our previous report, was to investigate the effect of low-dose AGP on gene expression in ileal mucosa of weaned pigs experimentally infected with F18 E. coli. Thirty-four pigs (6.88 ± 1.03 kg BW) were individually housed in disease containment rooms and randomly allotted to one of three treatments (9 to 13 pigs/treatment). The three dietary treatments were control diet (control), and 2 additional diets supplemented with 0.5 or 50 mg/kg of AGP (carbadox), respectively. The experiment lasted 18 d [7 d before and 11 d after first inoculation (d 0)]. The F18 E. coli inoculum was orally provided to all pigs with the dose of 1010 cfu/3 mL for 3 consecutive days. Total RNA [4 to 6 pigs/treatment on d 5; 5 to 7 pigs/treatment on 11 post-inoculation (PI)] was extracted from ileal mucosa to analyze gene expression profiles by Batch-Tag-Seq. The modulated differential gene expression were defined by 1.5-fold difference and a cutoff of P < 0.05 using limma-voom package. All processed data were statistically analyzed and evaluated by PANTHER classification system to determine the biological process function of genes in these lists. Compared to control, supplementation of recommended-dose AGP down-regulated genes related to inflammatory responses on d 5 and 11 PI; whereas, feeding low-dose AGP up-regulated genes associated with negative regulation of metabolic process on d 5, but down-regulated the genes related to immune responses on d 11 PI. The present observations support adverse effects of low-dose AGP in our previous study, indicated by exacerbated the detrimental effects of E. coli infection on pigs’ growth rate, diarrhea and systemic inflammation.

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Dietary plant extracts modulate gene expression profiles in ileal mucosa of weaned pigs after an Escherichia coli infection1

Journal of Animal Science ◽

10.2527/jas.2013-6422 ◽

2014 ◽

Vol 92 (5) ◽

pp. 2050-2062 ◽

Cited By ~ 28

Author(s):

Y. Liu ◽

M. Song ◽

T. M. Che ◽

J. J. Lee ◽

D. Bravo ◽

...

Keyword(s):

Gene Expression ◽

Escherichia Coli ◽

Plant Extracts ◽

Expression Profiles ◽

Gene Expression Profiles ◽

Weaned Pigs ◽

Ileal Mucosa

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PSII-13 Effects of antibiotics on serum metabolomic profiles in weanling pigs experimentally infected with a pathogenic E. coli

Journal of Animal Science ◽

10.1093/jas/skz258.472 ◽

2019 ◽

Vol 97 (Supplement_3) ◽

pp. 232-232

Author(s):

Kwangwook Kim ◽

Yijie He ◽

Cynthia Jinno ◽

Minho Song ◽

Peng Ji ◽

...

Keyword(s):

Low Dose ◽

Acid Metabolism ◽

Bile Acid Metabolism ◽

Pathway Enrichment Analysis ◽

High Dose ◽

Post Inoculation ◽

Growth Promoter ◽

Weaned Pigs ◽

Serum Metabolites ◽

E Coli

Abstract Our previous studies have shown that exposure to low-dose antibiotic growth promoter (AGP) may exacerbate the negative effects of Escherichia coli (E. coli) infection on weaned pigs. The objective of this experiment was to investigate the effects of low-dose AGP on serum metabolomic profiles of weaned pigs experimentally infected with F18 E. coli. Thirty-four pigs (6.88 ± 1.03 kg BW) were individually housed in disease containment rooms and randomly allotted to one of three treatments with 9–13 replicate pigs per treatment. The three dietary treatments were control diet (control) and 2 additional diets supplemented with 0.5 or 50 mg/kg of AGP (carbadox), respectively. The experiment lasted 18 d [7 d before and 11 d after first inoculation (d 0)]. The F18 E. coli inoculum was orally provided to all pigs with the dose of 1010 cfu/3 mL for 3 consecutive days. Blood samples were collected on d 0 before E. coli inoculation and on d 5 and 11 post-inoculation (PI). Serum metabolomics were analyzed for untargeted metabolomics by gas chromatography-time of flight-mass spectrometer (GC-TOF-MS). All processed data were statistically analyzed and evaluated by online MetaboAnalyst tool. No significant differences were observed in serum metabolites between control and low-dose AGP throughout the experiment. Supplementation of high-dose AGP changed the concentrations of several serum metabolites (P < 0.05; arabitol, guanine, and xylitol) compared with control pigs on d 5 PI. Further metabolic pathway enrichment analysis showed that low-dose AGP modified (P < 0.05) pentose phosphate pathway, DNA synthesis in T and B lymphocytes, bile acid metabolism, and amino acid metabolism in E. coli infected pigs, compared with high-dose AGP. In conclusion, the modification of serum metabolites and metabolic pathways by low-dose AGP may be involved in reduced growth performance, exacerbated diarrhea and systemic inflammation of weaned pigs induced by E. coli infection.

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Effect of low-dose hydrocortisone on gene expression profiles after severe burn injury

Critical Care ◽

10.1186/cc13265 ◽

2014 ◽

Vol 18 (Suppl 1) ◽

pp. P75

Author(s):

J Plassais ◽

MA Cazalis ◽

F Venet ◽

G Monneret ◽

A Pachot ◽

...

Keyword(s):

Gene Expression ◽

Low Dose ◽

Burn Injury ◽

Expression Profiles ◽

Gene Expression Profiles ◽

Severe Burn ◽

Severe Burn Injury

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In Vivo mRNA Profiling of Uropathogenic Escherichia coli from Diverse Phylogroups Reveals Common and Group-Specific Gene Expression Profiles

mBio ◽

10.1128/mbio.01075-14 ◽

2014 ◽

Vol 5 (4) ◽

Cited By ~ 39

Author(s):

Piotr Bielecki ◽

Uthayakumar Muthukumarasamy ◽

Denitsa Eckweiler ◽

Agata Bielecka ◽

Sarah Pohl ◽

...

Keyword(s):

Gene Expression ◽

Escherichia Coli ◽

Expression Profiles ◽

Gene Expression Profiles ◽

Specific Gene ◽

Content Type ◽

E Coli ◽

Human Host ◽

Tract Infections

ABSTRACTmRNA profiling of pathogens during the course of human infections gives detailed information on the expression levels of relevant genes that drive pathogenicity and adaptation and at the same time allows for the delineation of phylogenetic relatedness of pathogens that cause specific diseases. In this study, we used mRNA sequencing to acquire information on the expression ofEscherichia colipathogenicity genes during urinary tract infections (UTI) in humans and to assign the UTI-associatedE. coliisolates to different phylogenetic groups. Whereas thein vivogene expression profiles of the majority of genes were conserved among 21E. colistrains in the urine of elderly patients suffering from an acute UTI, the specific gene expression profiles of the flexible genomes was diverse and reflected phylogenetic relationships. Furthermore, genes transcribedin vivorelative to laboratory media included well-described virulence factors, small regulatory RNAs, as well as genes not previously linked to bacterial virulence. Knowledge on relevant transcriptional responses that drive pathogenicity and adaptation of isolates to the human host might lead to the introduction of a virulence typing strategy into clinical microbiology, potentially facilitating management and prevention of the disease.IMPORTANCEUrinary tract infections (UTI) are very common; at least half of all women experience UTI, most of which are caused by pathogenicEscherichia colistrains. In this study, we applied massive parallel cDNA sequencing (RNA-seq) to provide unbiased, deep, and accurate insight into the nature and the dimension of the uropathogenicE. coligene expression profile during an acute UTI within the human host. This work was undertaken to identify key players in physiological adaptation processes and, hence, potential targets for new infection prevention and therapy interventions specifically aimed at sabotaging bacterial adaptation to the human host.

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