Morphological Traits and Capture Depth of the Norwegian Skate (Dipturus nidarosiensis (Storm, 1881)) from Two Mediterranean Populations

The Norwegian skate Dipturus nidarosiensis (Storm, 1881) has only recently been recorded in the western-central Mediterranean Sea. It was hypothesized a more ancient presence of the species, which has not been detected due to a misidentification with other species of the same genus. This situation could lead to underestimate the risk of a dramatic decline of the spawning stock. In the IUCN Red List, the species is listed as near threatened and considered rare in both the northeast Atlantic and the Mediterranean areas. In the Mediterranean Sea, Norwegian skates were repeatedly caught mostly in two areas between 2005 and 2020: Sardinia Seas and Adriatic-Ionian Seas. In total, 58 specimens were caught, and 28 morphological length measurements were taken on all specimens. The Canonical Discriminant Analysis proved the presence of significant differences only for assemblages made on the basis of the specimen’s area of capture, but not on the basis of sex or ontogenetic development. This analysis could be the first step to highlight the differences between the populations of Norwegian skate in the Mediterranean basin. Moreover, a preliminary analysis of depth of capture was performed as a first step to study this species vertical distribution.

Morphometrics characterization in White Fulani, Muturu and Pasundan cows

<p class="MDPI17abstract"><strong>Objective: </strong>This study was aimed to characterize three different cattle breeds based on the morphometrics.</p><p class="MDPI17abstract"><strong>Methods: </strong>Five (5) morphometrics which include body length (BL), chest girth (CG), withers height (WH), rump length (RL) and chest depth (CD) were measured in each animal. A total of 119 cows belonging to White Fulani (40 heads), Muturu (40 heads) and Pasundan (39 heads) were used in this study. The age of animal study was 20.93±1.62 months (White Fulani), 21.63±1.75 months (Muturu) and 20.46±2.99 months (Pasundan). Hence, two statistical methods of canonical discriminant analysis (CDA) and hierarchical cluster analysis (HCA) methods were computed in this study to characterize of animals based on their morphometrics using SPSS 16.0 package.<strong></strong></p><p class="MDPI17abstract"><strong>Results: </strong>Mostly<strong> </strong>the morphometrics of White Fulani and Pasundan cows are similar while those of Muturu are significantly lower than the two other breeds. Four morphometric measurements of CG, RL, BL and WH were identified as a discriminator variables in animal study based on the CDA method. The CDA of morphometrics able to classify 85% (White Fulani), 100% (Muturu) and 74.4% (Pasundan) of the animal into their original breed group.<strong></strong></p><p class="MDPI17abstract"><strong>Conclusions: </strong>The closeness between observations from White Fulani and Pasundan might be due to them being both Zebu (<em>Bos indicus</em>) unlike the Muturu with a type breed of <em>Bos bracycheros</em>.<strong></strong></p>

Biochemical response of Sonneratia alba Sm. branches infested by a wood boring moth (Gazi Bay, Kenya)

Infestation by a moth woodborer species is causing mortality of Sonneratia alba Sm. mangrove by tunneling through the inner bark, cambium and conductive tissue. Infestation leads to death of some infested branches, whereas in other cases infested branches have been observed to recover from infestation. We have used Fourier transform infrared spectroscopy (FTIR) to investigate the differences in macromolecule (polysaccharide and lignin) content present in branches that died (D) of the infestation, those that recovered (R) from the infestation and control branches (C) that were not subject to any infestation. Wood samples were taken from four sampling plots (A, B, C and D) in Gazi Bay (Kenya). From each of the four plots, 15 S. alba branches were taken from five trees, from which 1 cm thick discs were cut from each of these branches to be used as samples. To identify the most characteristic FTIR bands for the three groups of samples, Principal Component Analysis (PCA) was applied on the transposed data matrix. Furthermore, canonical discriminant analysis was applied on the data considering the main FTIR band that would be identified through the PCA factors. Finally, One-way ANOVA and post hoc test were used to verify the significance of the observed trends. Branches that recovered from infestation had higher relative abundance of lignified cells. We conclude that insect-infested S. alba undergo changes related to the lignocellulosic contents. The infestation induces a decrease of the proportion of the polysaccharide content and an increase of the proportion of the lignin contents.

Intra- and interspecific discrimination of Scorpaena species from the Aegean, Black, Mediterranean and Marmara seas

This study was conducted to discriminate five Scorpaena species and populations of each species according to morphometric characters. A total of 1865 fish specimens were collected from the eight locations in the four Turkish seas: Antalya, Balıkesir, Çanakkale, Hatay, İzmir, Marmara Ereğlisi, Ordu and Şile. In the study, 26 morphometric traits were measured for intra- and interspecific discrimination of five Scorpaena species. The data were subjected to analysis of variance, principal components analysis (PCA) and canonical discriminant analysis. As results of the PCA, 10 traits for S. maderensis and S. scrofa, 12 traits for S. elongata and 13 traits for S. notata and S. porcus were found to be important for intraspcific discrimination. The overall classification scores of intraspecific discrimination were determined as 94.6% for S. elongata, 90.5% for S. maderensis, 96.7% for S. notata, 96.5% for S. porcus and 92.2% for S. scrofa. The PCA indicated that 13 morphometric measurements among the 26 traits are important in the interspecific discrimination of five Scorpaena species. The cross-validated canonical discriminant analysis was correctly classified as 97.4% at the Scorpaena species level. The discrimination of correctly classified species ranged from 94.8% to 100%. Finally, we demonstrated that the morphometric characters examined in the present study can be used successfully in the intra- and interspecific discrimination of Scorpaena species from different habitats.

Morphometry of stingless bees (Hymenoptera:Apidae:Meliponini) of the genus Lisotrigona indicates presence of more than one species in India

Morphometry of 53 stingless bees of the genus Lisotrigona collected from seven places in India by using 36 morphological parameters was studied. The data set also included morphometry data of primary types of L. cacciae, L. chandrai and L. revanai for comparison and was subjected to Factor and Canonical Discriminant analysis. All the bees collected from five places formed two distinct clusters in the Factor analysis and five clusters in Canonical Discriminant analysis. In both the methods of analysis primary types of L. cacciae, L. chandrai and L. revanai were placed well separated from each other as well as from other bees. The bees from seven places also differed from the three known species in morphometry and ratios of length and width of parts of the body. Based on these results it is concluded that Indian stingless bees of the genus Lisotrigona consists of more than one species besides L. cacciae. The action of synonymizing L. mohandasi, L. chandrai and L. revanai with L. cacciae appears arbitrary; these three species should be considered valid until supported by male genital morphology or molecular characters.

Latino men’s preferences for technology-mediated behavioral lifestyle interventions (Preprint)

BACKGROUND Although Latino men have the highest prevalence (45%) of obesity among all men in the US, traditional weight loss interventions do not engage this hard-to-reach and diverse group. Technology-mediated weight loss interventions may offer advantages given Latinos’ rapidly increasing access to the internet. OBJECTIVE We examined whether Latino men who were overweight or obese preferred engaging in a weight loss intervention with one of 2 technology-mediated options – live group sessions on videoconference or pre-recorded videos available online – or in-person groups sessions. We also examined whether men differed according to demographic, clinical, employment, cultural, and technology use and access factors across the 3 intervention options chosen. Finally, we assessed whether men who chose a videoconference group attended more sessions than men who chose an in-person group. METHODS Latino men (n=202, 47.3 ± 11.8 years) were participants in a comparative effectiveness trial based in primary care and randomized to receive the HOMBRE (Hombres con Opciones para Mejorar su Bienestar y Reducir EnfermedadeS cronicas) intervention. HOMBRE was a culturally adapted weight loss intervention offering 3 delivery options with each providing the same evidence-based weight loss sessions. During an orientation session, a trained bilingual coach helped men select one of the 3 intervention options. We used chi-square tests and ANOVA to examine bivariate associations and canonical discriminant analysis for multivariate associations of demographic, clinical, employment, cultural, and technology use and access factors with men’s intervention choice. RESULTS Most Latino men preferred one of the 2 technology-mediated interventions versus a traditional in-person group (60% vs 40%, respectively) with 22% choosing videoconference groups and 38% choosing online videos. For men who selected a group delivery option, 86% attended >25%, 82% attended >50%, and 58% attended >75% of the sessions, with no differences by type of group. Latino men who chose a technology-mediated intervention were more likely to have higher education, be working full or part time, only speak English, be more acculturated, and have computer access than men who chose an in-person group. The canonical discriminant analysis identified 1 orthogonal dimension that distinguished between men who chose an in-person group versus online videos. Participants with a profile of speaking Spanish, being older, using a computer infrequently, having an occupation that requires mostly sitting or standing (relative to having no job), not living with another person, and having less sleep disturbance had a higher probability of choosing an in-person group versus online videos. CONCLUSIONS The majority of Latino men offered a choice for weight loss interventions preferred technology-mediated options to in-person groups, especially for educated, English-speaking Latino men with computer access. Providing options that accommodate the diversity of Latino men’s preferences is important for increasing engagement in behavioral interventions. CLINICALTRIAL NCT03092960

Discriminant Canonical Analysis of the Contribution of Spanish and Arabian Purebred Horses to the Genetic Diversity and Population Structure of Hispano-Arabian Horses

Genetic diversity and population structure were analyzed using the historical and current pedigree information of the Arabian (PRá), Spanish Purebred (PRE), and Hispano-Arabian (Há) horse breeds. Genetic diversity parameters were computed and a canonical discriminant analysis was used to determine the contributions of ancestor breeds to the genetic diversity of the Há horse. Pedigree records were available for 207,100 animals born between 1884 and 2019. Nei’s distances and the equivalent subpopulations number indicated the existence of a highly structured, integrated population for the Há breed, which is more closely genetically related to PRá than PRE horses. An increase in the length of the generation interval might be an effective solution to reduce the increase in inbreeding found in the studied breeds (8.44%, 8.50%, and 2.89%, for PRá, PRE, and Há, respectively). Wright’s fixation statistics indicated slight interherd inbreeding. Pedigree completeness suggested genetic parameters were highly reliable. High GCI levels found for number of founders and non-founders and their relationship to the evolution of inbreeding permit controlling potential deleterious negative effects from excessively frequent mating between interrelated individuals. For instance, the use of individuals presenting high GCI may balance founders’ gene contributions and consequently preserve genetic diversity levels (current genetic diversity loss in PRá, PRE, and Há is 6%, 7%, and 4%, respectively).

Comparative analysis of shape variation in the cone scales of Larix dahurica and L. cajanderi (Pinaceae)

Geometric morphometric analysis of shape variation in the cone scales of two closely related larch species, Larix dahurica Laws. (=Larix gmelinii (Rupr.) Rupr) and L. cajanderi Mayr, was carried out. The data on the taxonomy and distribution of L. dahurica and L. cajanderi are contradictory. The taxonomic status of L. cajanderi has been confirmed by the genetic and morphological studies performed in Russia and based on considerable evidence, but the species has not been recognized internationally, being considered as a synonym of Larix gmelinii var. gmelinii. In the systematics of larch, morphological characters of the generative organs are mainly used as diagnostic markers, among the most important being the shape variation of the cone scales. The aim of this study was to test geometric morphometrics as a tool for analyzing differentiation of L. dahurica and L. cajanderi in the shape of their cone scales. Characterization of shape variations in cone scales using geometric morphometric methods consists in digitizing points along an outline of scales followed by analysis of partial warps, describing individual differences in coordinates of the outline points. We studied the populations of L. dahurica from Evenkia and the Trans-Baikal region and six L. cajanderi populations from Yakutia and Magadan Oblast. In each population, we analyzed samples of 100-150 cones collected from 20-30 trees. Scales taken from the middle part of the cones were scanned using an Epson Perfection V500 Photo. On the scanned images, outline points were placed with a TPSDig program (Rolf, 2010), using angular algorithm (Oreshkova et al., 2015). The data were processed and analyzed using Integrated Morphometrics Programs (IMP) software (http://www.canisius.edu/~sheets/ morphsoft.html, Sheets, 2001), following the guidelines on geometric morphometrics in biology (Pavlinov, Mikeshina, 2002; Zelditch et al., 2004). Initial coordinates of the scale landmarks were aligned with the mean structure for L. dahurica and L. cajanderi cone scales using Procrustes superimposition in the CoordGen6 program. PCA based on covariances of partial warp scores was applied to reveal directions of variation in the shape of the cone scales. The relative deformations of the cone scales (PCA scores) were used as shape variables for statistical comparisons of these two larch species with canonical discriminant analysis. Morphotypes of the cone scales were distinguished in L. dahurica populations by pairwise comparison of samples from trees in the TwoGroup6h program using Bootstrap resampling-based Goodall’s F-test (Sheets, 2001). Samples from the trees in which the cone scales differed significantly (p < 0.01) were considered to belong to different morphotypes. Morphotypes distinguished in L. dahurica populations were compared with the morphotypes that we had previously determined in L. cajanderi populations. The composition and the frequency of occurrence of morphotypes were used to determine phenotypic distances between populations (Zhivotovskii, 1991). Multidimensional scaling matrix of the phenotypic distances was applied for ordination of larch populations. In this research, we revealed differentiation of L. dahurica and L. cajanderi using geometric morphometric analysis of the shape variation of cone scales. The results of PCA of partial warp scores exposed four principal components, which account for 90% of total explained variance in the shape of the cone scales in the two larch species. Graphical representations of these shape transformations in the vector form characterized directions of shape variability in scales corresponding to the maximum and minimum values of four principal components (See Fig. 2). PCA-ordination of the larch populations revealed some difference in the shape variation of the cone scales in L. dahurica and L. cajanderi (See Fig. 3). The results of canonical discriminant analysis of relative deformations of scales showed differentiation of the populations of the two larch species (See Fig. 4). Eleven morphotypes were identified in L. dahurica cones from Evenkia and nine morphotypes in the Ingoda population, three of the morphotypes being common for both populations (See Fig. 5). The shape of L. dahurica cone scales varied from spatulate to oval and their apical margins from weakly sinuate to distinctly sinuate. The Trans-Baikal population was dominated by scales with obtuse (truncate) and rounded apexes. The obtained morphotypes were compared with 25 cone scale morphotypes previously distinguished in the Yakut and the Magadan L. cajanderi populations (See Fig. 3). Four similar morphotypes of cone scales were revealed in the North-Yeniseisk population of L. dahurica and the Yakut populations of L. cajanderi. The differences between them in the populations of the two larch species were nonsignificant (p > 0.01). All morphotypes of cone scales from the Ingoda population of L. dahurica differed significantly from L. cajanderi cone scale morphotypes. The results of multidimensional scaling phenotypic distance matrix calculated based on the similarity of morphotypes of L. dahurica and L. cajanderi populations were consistent with the results of their differentiation based on relative deformations of scales obtained using canonical discriminant analysis (See Fig. 4 and Fig. 7). In spite of the differences in the shape of the cone scales between the North-Yeniseisk and the Trans-Baikal populations of L. dahurica, they both differed from L. cajanderi populations. Thus, phenotypic analysis confirmed differentiation of these two larch species. Despite the similarities between a number of morphotypes, the Yakut L. cajanderi populations were differentiated from L. dahurica populations. Significant differences were noted between intraspecific groups: between L. cajanderi populations from Okhotsk-Kolyma Upland and Yakutia and between L. dahurica populations from Evenkia and the Trans-Baikal region (See Fig. 4). The similarities between species and intraspecific differences may be attributed to the ongoing processes of hybridization and species formation in the region where the ranges of the larches overlap with the ranges of L. czekanowskii Szafer and L. dahurica×L. cajanderi hybrids. Geometric morphometrics can be used as an effective tool for analyzing differentiation of L. dahurica and L. cajanderi in the shape of their cone scales.