scholarly journals Core-periphery structure in mutualistic networks: an epitaph for nestedness?

2020 ◽  
Author(s):  
Ana M. Martín González ◽  
Diego P. Vázquez ◽  
Rodrigo Ramos-Jiliberto ◽  
Sang Hoon Lee ◽  
Vincent Miele

ABSTRACTThe calculation of nestedness has become a routine analysis in the study of ecological networks, as it is commonly associated with community resilience, robustness and species persistence. While meaningful in species distributional patterns, for an interaction matrix to be nested, specialist species must interact with ordered subsets of subsequently more generalized species — not just with a lower number of species. However, after reviewing 419 papers on mutualistic networks published since nestedness was introduced for the study of species interactions in 2003, we have found that only two theoretical studies considered explicitly ordered subsets. Instead, most studies interpret nestedness as a core of densely connected generalist species, surrounded by a periphery of specialist species attached to this core — a so-called core-periphery structure. Such a topological feature is generally perceived as a core-periphery structure in network science. Here, we argue that the concept of core-periphery may be more relevant for studies on mutualistic networks than the concept of nestedness, as ecologists are usually not interested in exploring in detail the ordered subsets that characterize nestedness but instead use nestedness to describe a topology with a core of densely linked generalist species surrounded by a sparsely linked periphery of specialists. To illustrate our arguments and the quantification of core-periphery structures, we calculate core-periphery and nestedness in a large publicly available dataset of mutualistic networks. We also describe the calculation of core-periphery structures, its relationship with nestedness, and provide the code inside the R package econetwork for its calculation in mutualistic networks. We hope that our review will help ecologists to move beyond nestedness towards a more explicit representation of the structure of ecological networks.

2014 ◽  
Author(s):  
Samir Suweis ◽  
Filippo Simini ◽  
Jayanth Banavar ◽  
Amos Maritan

Mutualistic networks are formed when the interactions between two classes of species are mutually beneficial. They are important examples of cooperation shaped by evolution. Mutualism between animals and plants has a key role in the organization of ecological communities. Such networks in ecology have generally evolved a nested architecture independent of species composition and latitude; specialist species, with only few mutualistic links, tend to interact with a proper subset of the many mutualistic partners of any of the generalist species. Despite sustained efforts to explain observed network structure on the basis of community-level stability or persistence, such correlative studies have reached minimal consensus. Here we show that nested interaction networks could emerge as a consequence of an optimization principle aimed atmaximizing the species abundance in mutualistic communities. Using analytical and numerical approaches, we show that because of the mutualistic interactions, an increase in abundance of a given species results in a corresponding increase in the total number of individuals in the community, and also an increase in the nestedness of the interaction matrix. Indeed, the species abundances and the nestedness of the interaction matrix are correlated by a factor that depends on the strength of the mutualistic interactions. Nestedness and the observed spontaneous emergence of generalist and specialist species occur for several dynamical implementations of the variational principle under stationary conditions. Optimized networks, although remaining stable, tend to be less resilient than their counterparts with randomly assigned interactions. In particular, we show analytically that the abundance of the rarest species is linked directly to the resilience of the community. Our work provides a unifying framework for studying the emergent structural and dynamical properties of ecological mutualistic networks.


2018 ◽  
Vol 115 (47) ◽  
pp. 12017-12022 ◽  
Author(s):  
Lucas P. Medeiros ◽  
Guilherme Garcia ◽  
John N. Thompson ◽  
Paulo R. Guimarães

Ecological interactions shape adaptations through coevolution not only between pairs of species but also through entire multispecies assemblages. Local coevolution can then be further altered through spatial processes that have been formally partitioned in the geographic mosaic theory of coevolution. A major current challenge is to understand the spatial patterns of coadaptation that emerge across ecosystems through the interplay between gene flow and selection in networks of interacting species. Here, we combine a coevolutionary model, network theory, and empirical information on species interactions to investigate how gene flow and geographical variation in selection affect trait patterns in mutualistic networks. We show that gene flow has the surprising effect of favoring trait matching, especially among generalist species in species-rich networks typical of pollination and seed dispersal interactions. Using an analytical approximation of our model, we demonstrate that gene flow promotes trait matching by making the adaptive landscapes of different species more similar to each other. We use this result to show that the progressive loss of gene flow associated with habitat fragmentation may undermine coadaptation in mutualisms. Our results therefore provide predictions of how spatial processes shape the evolution of species-rich interactions and how the widespread fragmentation of natural landscapes may modify the coevolutionary process.


2006 ◽  
Vol 274 (1609) ◽  
pp. 591-598 ◽  
Author(s):  
Jeff Ollerton ◽  
Duncan McCollin ◽  
Daphne G Fautin ◽  
Gerald R Allen

The interaction structure of mutualistic relationships, in terms of relative specialization of the partners, is important to understanding their ecology and evolution. Analyses of the mutualistic interaction between anemonefish and their host sea anemones show that the relationship is highly nested in structure, generalist species interacting with one another and specialist species interacting mainly with generalists. This supports the hypothesis that the configuration of mutualistic interactions will tend towards nestedness. In this case, the structure of the interaction is at a much larger scale than previously hypothesized, across more than 180° of longitude and some 60° of latitude, probably owing to the pelagic dispersal capabilities of these species in a marine environment. Additionally, we found weak support for the hypothesis that geographically widespread species should be more generalized in their interactions than species with small ranges. This study extends understanding of the structure of mutualistic relationships into previously unexplored taxonomic and physical realms, and suggests how nestedness analysis can be applied to the conservation of obligate species interactions.


2019 ◽  
pp. 179-205
Author(s):  
Gary G. Mittelbach ◽  
Brian J. McGill

This chapter explores ecological networks and their properties. Ecological networks summarize the many potential interactions between species within a community by representing species as nodes in the network and using links between nodes to represent the interactions between species. The earliest and best-studied ecological networks are food webs that describe who eats whom within a community (trophic links). Most food webs contain a few strong and many weak links between species; the preponderance of weak links promotes food web stability. Body size is a key trait in determining the pattern and strength of trophic interactions in food webs. Mutualistic networks describe the positive interactions between species in a community, where patterns of species associations may be characterized as either “nested” or “modular”. Nestedness may increase stability in mutualistic networks. A major challenge to future research is to incorporate multiple types of species interactions into the same ecological network.


2016 ◽  
Vol 16 (3) ◽  
Author(s):  
Samuel Renner ◽  
Eduardo Périco ◽  
Göran Sahlén

Abstract A survey of Odonata was carried out in the National Forest FLONA - SFP, Northeastern region of the Rio Grande do Sul state, Brazil. This conservation unit is mainly covered by Mixed Ombrophilous Forest (MOF), a subtype of Atlantic Forest biome, being also areas covered in planted Pinus, planted Araucaria and open fields. Our sampling efforts were conducted in thirty aquatic environments inside this reserve during the period between January 2014 and November 2014. The sampling sites were selected randomly, comprehending lakes, bogs, small streams and river sections, all inserted in the four vegetation types occurring in the reserve. Fortysix species of Odonata were collected and grouped into 23 genera and seven families. The dominant families were Coenagrionidae (32%), Libellulidae (32%), Aeshnidae (12%), and, Calopterygidae and Lestidae (9%). As expected, the findings revealed the presence of a highly diverse Odonate assemblage, mainly represented by generalist species in the most human disturbed sectors (Pinus and Open fields) and some specialist species in the pristine forest. Two species were registered for the first time in the state of Rio Grande do Sul, Brazil: Libellula herculea Karsch, 1889 (Libellulidae) and Heteragrion luizfelipei Machado, 2006 (Heteragrionidae).


2019 ◽  
Vol 28 (2) ◽  
pp. 157-164 ◽  
Author(s):  
Tomas Roslin ◽  
Michael Traugott ◽  
Mattias Jonsson ◽  
Graham N. Stone ◽  
Simon Creer ◽  
...  

2017 ◽  
Vol 26 (12) ◽  
pp. 1030 ◽  
Author(s):  
Andrew H. Lybbert ◽  
Justin Taylor ◽  
Alysa DeFranco ◽  
Samuel B. St Clair

Wildfire can drastically affect plant sexual reproductive success in plant–pollinator systems. We assessed plant reproductive success of wind, generalist and specialist pollinated plant species along paired unburned, burned-edge and burned-interior locations of large wildfires in the Mojave Desert. Flower production of wind and generalist pollinated plants was greater in burned landscapes than adjacent unburned areas, whereas specialist species responses were more neutral. Fruit production of generalist species was greater in burned landscapes than in unburned areas, whereas fruit production of wind- and specialist-pollinated species showed no difference in burned and unburned landscapes. Plants surviving in wildfire-disturbed landscapes did not show evidence of pollination failure, as measured by fruit set and seed:ovule ratios. Generalist- and specialist-plant species established in the interior of burned landscapes showed no difference in fruit production than plants established on burned edges suggesting that pollination services are conserved with increasing distance from fire boundaries in burned desert landscapes. Stimulation of plant reproduction in burned environments due to competition release may contribute to the maintenance of pollinator services and re-establishment of the native plant community in post-fire desert environments.


2014 ◽  
Author(s):  
Timothée E Poisot ◽  
Benjamin Baiser ◽  
Jennifer A Dunne ◽  
Sonia Kéfi ◽  
Francois Massol ◽  
...  

The study of ecological networks is severely limited by (i) the difficulty to access data, (ii) the lack of a standardized way to link meta-data with interactions, and (iii) the disparity of formats in which ecological networks themselves are represented. To overcome these limitations, we conceived a data specification for ecological networks. We implemented a database respecting this standard, and released a R package ( `rmangal`) allowing users to programmatically access, curate, and deposit data on ecological interactions. In this article, we show how these tools, in conjunctions with other frameworks for the programmatic manipulation of open ecological data, streamlines the analysis process, and improves eplicability and reproducibility of ecological networks studies.


2018 ◽  
Author(s):  
Kimberly J. Gilbert ◽  
Stephan Peischl ◽  
Laurent Excoffier

AbstractThe fitness of spatially expanding species has been shown to decrease over time and space, but specialist species tracking their changing environment and shifting their range accordingly have been little studied. We use individual-based simulations and analytical modeling to compare the impact of range expansions and range shifts on genetic diversity and fitness loss, as well as the ability to recover fitness after either a shift or expansion. We find that the speed of a shift has a strong impact on fitness evolution. Fastest shifts show the strongest fitness loss per generation, but intermediate shift speeds lead to the strongest fitness loss per geographic distance. Range shifting species lose fitness more slowly through time than expanding species, however, their fitness compared at equivalent geographic distances spread can be considerably lower. These counter-intuitive results arise from the combination of time over which selection acts and mutations enter the system. Range shifts also exhibit reduced fitness recovery after a geographic shift and may result in extinction, whereas range expansions can persist from the core of the species range. The complexity of range expansions and range shifts highlights the potential for severe consequences of environmental change on species survival.Author SummaryAs environments change through time across the globe, species must adapt or relocate to survive. Specialized species must track the specific moving environments to which they are adapted, as compared to generalists which can spread widely. During colonization of new habitat, individuals can accumulate deleterious alleles through repeated bottlenecks. We show through simulation and analytic modeling that the process by which these alleles accumulate changes depending upon the speed at which populations spread over a landscape. This is due to the increased efficacy of selection against deleterious variants at slow speeds of range shifts and decreased input of mutations at faster speeds of range shifts. Under some selective circumstances, shifting of a species range leads to extinction of the entire population. This suggests that the rate of environmental change across the globe will play a large role in the survival of specialist species as compared to more generalist species.


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