scholarly journals High-throughput phenotyping reveals a link between transpiration efficiency and transpiration restriction under high evaporative demand and new loci controlling water use-related traits in African rice, Oryza glaberrima Steud.

2021 ◽  
Author(s):  
Pablo Affortit ◽  
Branly Effa Effa ◽  
Mame Sokhatil Ndoye ◽  
Daniel Moukouanga ◽  
Nathalie Luchaire ◽  
...  
Keyword(s):  
Water Use Efficiency ◽  
Water Use ◽  
Association Studies ◽  
Crop Improvement ◽  
Oryza Glaberrima ◽  
Genome Wide Association Studies ◽  
Transpiration Efficiency ◽  
Evaporative Demand ◽  
African Rice ◽  
Use Efficiency

Because water availability is the most important environmental factor limiting crop production, improving water use efficiency, the amount of carbon fixed per water used, is a major target for crop improvement. In rice, the genetic bases of transpiration efficiency, the derivation of water use efficiency at the whole-plant scale, and its putative component trait transpiration restriction under high evaporative demand, remain unknown. These traits were measured in a panel of 147 African rice Oryza glaberrima genotypes, known as potential sources of tolerance genes to biotic and abiotic stresses. Our results reveal that higher transpiration efficiency is associated with transpiration restriction in African rice. Detailed measurements in a subset of highly differentiated genotypes confirmed these associations and suggested that the root to shoot ratio played an important role in transpiration restriction. Genome wide association studies identified marker-trait associations for transpiration response to evaporative demand, transpiration efficiency and its residuals, that links to genes involved in water transport and cell wall patterning. Our data suggest that root shoot partitioning is an important component of transpiration restriction that has a positive effect on transpiration efficiency in African rice. Both traits are heritable and define targets for breeding rice with improved water use strategies.

scholarly journals Utilizing trait networks and structural equation models as tools to interpret multi-trait genome-wide association studies

Plant Methods ◽  
2019 ◽  
Vol 15 (1) ◽  
Author(s):  
Mehdi Momen ◽  
Malachy T. Campbell ◽  
Harkamal Walia ◽  
Gota Morota
Keyword(s):  
Water Use Efficiency ◽  
Water Use ◽  
Indirect Effects ◽  
Structural Equation ◽  
Structural Equation Models ◽  
Association Studies ◽  
Genome Wide Association ◽  
Genome Wide Association Studies ◽  
Genome Wide ◽  
Use Efficiency

Abstract Background Plant breeders seek to develop cultivars with maximal agronomic value, which is often assessed using numerous, often genetically correlated traits. As intervention on one trait will affect the value of another, breeding decisions should consider the relationships among traits in the context of putative causal structures (i.e., trait networks). While multi-trait genome-wide association studies (MTM-GWAS) can infer putative genetic signals at the multivariate scale, standard MTM-GWAS does not accommodate the network structure of phenotypes, and therefore does not address how the traits are interrelated. We extended the scope of MTM-GWAS by incorporating trait network structures into GWAS using structural equation models (SEM-GWAS). Here, we illustrate the utility of SEM-GWAS using a digital metric for shoot biomass, root biomass, water use, and water use efficiency in rice. Results A salient feature of SEM-GWAS is that it can partition the total single nucleotide polymorphism (SNP) effects acting on a trait into direct and indirect effects. Using this novel approach, we show that for most QTL associated with water use, total SNP effects were driven by genetic effects acting directly on water use rather that genetic effects originating from upstream traits. Conversely, total SNP effects for water use efficiency were largely due to indirect effects originating from the upstream trait, projected shoot area. Conclusions We describe a robust framework that can be applied to multivariate phenotypes to understand the interrelationships between complex traits. This framework provides novel insights into how QTL act within a phenotypic network that would otherwise not be possible with conventional multi-trait GWAS approaches. Collectively, these results suggest that the use of SEM may enhance our understanding of complex relationships among agronomic traits.

scholarly journals Reducing the Excessive Evaporative Demand Improved the Water-use Efficiency of Greenhouse Cucumber by Regulating the Trade-off between Irrigation Demand and Plant Productivity

HortScience ◽  
2018 ◽  
Vol 53 (12) ◽  
pp. 1784-1790 ◽  
Author(s):  
Dalong Zhang ◽  
Yuping Liu ◽  
Yang Li ◽  
Lijie Qin ◽  
Jun Li ◽  
...  
Keyword(s):  
Water Stress ◽  
Water Use Efficiency ◽  
Water Flow ◽  
Water Use ◽  
Plant Productivity ◽  
Plant Water ◽  
Evaporative Demand ◽  
Plant Water Stress ◽  
Irrigation Demand ◽  
Use Efficiency

Although atmospheric evaporative demand mediates water flow and constrains water-use efficiency (WUE) to a large extent, the potential to reduce irrigation demand and improve water productivity by regulating the atmospheric water driving force is highly uncertain. To bridge this gap, water transport in combination with plant productivity was examined in cucumber (Cucumis sativus L.) grown at contrasting evaporative demand gradients. Reducing the excessive vapor pressure deficit (VPD) decreased the water flow rate, which reduced irrigation consumption significantly by 16.4%. Reducing excessive evaporative demand moderated plant water stress, as leaf dehydration, hydraulic limitation, and excessive negative water potential were prevented by maintaining water balance in the low-VPD treatment. The moderation of plant water stress by reducing evaporative demand sustained stomatal function for photosynthesis and plant growth, which increased substantially fruit yield and shoot biomass by 20.1% and 18.4%, respectively. From a physiological perspective, a reduction in irrigation demand and an improvement in plant productivity were achieved concomitantly by reducing the excessive VPD. Consequently, WUE based on the criteria of plant biomass and fruit yield was increased significantly by 43.1% and 40.5%, respectively.

Water Use Efficiency as a Constraint and Target for Improving the Resilience and Productivity of C3and C4Crops

2019 ◽  
Vol 70 (1) ◽  
pp. 781-808 ◽  
Author(s):  
Andrew D.B. Leakey ◽  
John N. Ferguson ◽  
Charles P. Pignon ◽  
Alex Wu ◽  
Zhenong Jin ◽  
...  
Keyword(s):  
Water Use Efficiency ◽  
Water Use ◽  
Crop Production ◽  
Crop Improvement ◽  
Canopy Structure ◽  
Complex Trait ◽  
Carbon Gain ◽  
Crop Development ◽  
Component Traits ◽  
Use Efficiency

The ratio of plant carbon gain to water use, known as water use efficiency (WUE), has long been recognized as a key constraint on crop production and an important target for crop improvement. WUE is a physiologically and genetically complex trait that can be defined at a range of scales. Many component traits directly influence WUE, including photosynthesis, stomatal and mesophyll conductances, and canopy structure. Interactions of carbon and water relations with diverse aspects of the environment and crop development also modulate WUE. As a consequence, enhancing WUE by breeding or biotechnology has proven challenging but not impossible. This review aims to synthesize new knowledge of WUE arising from advances in phenotyping, modeling, physiology, genetics, and molecular biology in the context of classical theoretical principles. In addition, we discuss how rising atmospheric CO2concentration has created and will continue to create opportunities for enhancing WUE by modifying the trade-off between photosynthesis and transpiration.

High crop productivity with high water use in winter and summer on the Liverpool Plains, eastern Australia

2008 ◽  
Vol 59 (4) ◽  
pp. 303 ◽  
Author(s):  
R. R. Young ◽  
P.-J. Derham ◽  
F. X. Dunin ◽  
A. L. Bernardi ◽  
S. Harden
Keyword(s):  
Water Use Efficiency ◽  
Soil Water ◽  
Water Use ◽  
High Water ◽  
Crop Productivity ◽  
Transpiration Efficiency ◽  
Eastern Australia ◽  
Use Efficiency ◽  
Water Outflow ◽  
Almost All

We report exceptional productivity and associated water-use efficiency across seasons for commercial crops of rainfed spring wheat and grain sorghum growing on stored soil water in Vertosols on the Liverpool Plains, central-eastern Australia. Agreement between the independently measured terms of evapotranspiration (ET) and the soil water balance (in-crop rainfall + δsoil water) was achieved within acceptable uncertainty across almost all measurement intervals, to provide a reliable dataset for the analysis of growth and water-use relationships without the confounding influence of water outflow either overland or within the soil. Post-anthesis intrinsic transpiration efficiency (kc ) values of 4.7 and 7.2 Pa for wheat and sorghum, respectively, and grain yields of 8 and 7 t/ha from ET of 450 and 442 mm (1.8 and 1.6 g/m2.mm), clearly demonstrate the levels of productivity and water-use efficiency possible for well-managed crops within an intensive and productive response cropping sequence. The Vertosols in which the crops were grown enabled rapid and apparently unconstrained delivery of significant quantities of subsoil water (34% and 51% of total available) after anthesis, which enabled a doubling of pre-anthesis standing biomass and harvest indices of almost 50%. Durum wheat planted into only 0.30 m of moist soil and enduring lower than average seasonal rainfall, yielded less biomass and grain (2.3 t/ha) with lower water-use efficiency (0.95 g/m2.mm) but larger transpiration efficiency, probably due to reduced stomatal conductance. We argue that crop planting in response to stored soil water and management for high water-use efficiency to achieve high levels of average productivity of crop sequences over time can have a significant effect on both increased productivity and enhanced hydrological stability across alluvial landscapes.

scholarly journals Water Use, Leaf Cooling and Carbon Assimilation Efficiency of Heat Resistant Common Beans Evaluated in Western Amazonia

2021 ◽  
Vol 12 ◽  
Author(s):  
Juan Carlos Suárez ◽  
Milan O. Urban ◽  
Amara Tatiana Contreras ◽  
Jhon Eduar Noriega ◽  
Chetan Deva ◽  
...  
Keyword(s):  
Water Use Efficiency ◽  
Water Use ◽  
Acid Soil ◽  
Crop Improvement ◽  
Assimilation Efficiency ◽  
Carbon Assimilation ◽  
Acid Soils ◽  
Soil Conditions ◽  
Heat Resistant ◽  
Use Efficiency

In our study, we analyzed 30years of climatological data revealing the bean production risks for Western Amazonia. Climatological profiling showed high daytime and nighttime temperatures combined with high relative humidity and low vapor pressure deficit. Our understanding of the target environment allows us to select trait combinations for reaching higher yields in Amazonian acid soils. Our research was conducted using 64 bean lines with different genetic backgrounds. In high temperatures, we identified three water use efficiency typologies in beans based on detailed data analysis on gasometric exchange. Profligate water spenders and not water conservative accessions showed leaf cooling, and effective photosynthate partitioning to seeds, and these attributes were found to be related to higher photosynthetic efficiency. Thus, water spenders and not savers were recognized as heat resistant in acid soil conditions in Western Amazonia. Genotypes such as BFS 10, SEN 52, SER 323, different SEFs (SEF 73, SEF 10, SEF 40, SEF 70), SCR 56, SMR 173, and SMN 99 presented less negative effects of heat stress on yield. These genotypes could be suitable as parental lines for improving dry seed production. The improved knowledge on water-use efficiency typologies can be used for bean crop improvement efforts as well as further studies aimed at a better understanding of the intrinsic mechanisms of heat resistance in legumes.

Growth and yield response of barley and chickpea to water stress under three environments in southeast Queensland. III. Water use efficiency, transpiration efficiency and soil evaporation

1995 ◽  
Vol 46 (1) ◽  
pp. 49 ◽  
Author(s):  
s Thoma ◽  
S Fukai
Keyword(s):  
Water Stress ◽  
Water Use Efficiency ◽  
Water Use ◽  
Vapour Pressure Deficit ◽  
Soil Evaporation ◽  
Growth And Yield ◽  
Yield Response ◽  
Transpiration Efficiency ◽  
Canopy Development ◽  
Use Efficiency

Two cultivars of barley and one cultivar of chickpea were grown in both well-watered and water stress conditions in three experiments. Water use efficiency (biomass produced per unit evapotranspiration) was lower in chickpea than in barley, and between two barley cultivars it was higher in early-maturing Corvette than in late-maturing Triumph. These differences in water use efficiency were mostly related to the differences in transpiration efficiency (biomass produced per unit transpiration). The latter appeared to reflect the differences in biomass production under well-watered conditions, as similar differences were found in light use efficiency (biomass produced per unit of photosynthetically active radiation intercepted) among the three crops. Transpiration efficiency was inversely related to vapour pressure deficit of the air. In three experiments soil evaporation accounted for about 55% and 10-30% of total water use for chickpea and barley respectively during observation periods, when rainfall was excluded from the plots. Slow canopy development of chickpea was a reason for such a high proportion of soil evaporation, and this contributed to its lower water use efficiency compared to barley. The amount of radiation transmitted to the soil surface appeared to be an important factor determining soil evaporation, even when soil water was not fully available and limiting soil evaporation.

Silicon Accumulation and 13C Composition as Indices of Water-Use Efficiency in Barley Cultivars

1991 ◽  
Vol 18 (4) ◽  
pp. 427 ◽  
Author(s):  
CD Walker ◽  
RCM Lance
Keyword(s):  
Water Use Efficiency ◽  
Water Use ◽  
Dry Matter ◽  
Atmospheric Co2 ◽  
Evaporative Demand ◽  
Normal Field ◽  
Barley Cultivars ◽  
13C Discrimination ◽  
Silicon Accumulation ◽  
Use Efficiency

Barley cultivars were examined for silicon accumulation in dry matter as a possible indicator of water-use efficiency (W), and for their organic 13C composition, whose discrimination from the 13C composition of atmospheric CO2 (Δ) is an accepted indicator of W. Silicon concentration was found to correlate with 13C discrimination more strongly in the field than in the glasshouse experiments. We suggest that, under mild glasshouse conditions, plants actively accumulate Si whereas, under higher evaporative demand in the field, Si accumulates passively on the transpiration stream. We find that Si may be used as a corroborative indicator of water-use efficiency in normal field circumstances.

Relationships between carbon isotope discrimination, water use efficiency and transpiration efficiency for dryland wheat

1993 ◽  
Vol 44 (8) ◽  
pp. 1693 ◽  
Author(s):  
AG Condon ◽  
RA Richards ◽  
GD Farquhar
Keyword(s):  
Water Use Efficiency ◽  
Soil Water ◽  
Water Use ◽  
Negative Correlation ◽  
Seasonal Changes ◽  
Dry Matter ◽  
Carbon Isotope Discrimination ◽  
Transpiration Efficiency ◽  
Use Efficiency ◽  
The Relationship

Carbon isotope discrimination (-) has been shown to be negatively correlated with water use efficiency for wheat cultivars grown in the glasshouse. In the field this negative correlation has been confirmed for peanut but it has yet to be confirmed for wheat. Indeed, several field studies on wheat have shown positive (rather than negative) relationships between dry matter production and -. The aim of this study was to determine the relationship between - and water use efficiency for wheat grown in a dryland environment characterized by winterlspring-dominant rainfall and terminal drought. Eight genotypes chosen to give a range in - of c. 2.0x10-3 were grown on a red earth at Moombooldool in the Riverina region of New South Wales. Water use and above-ground dry matter (DM) were measured over the course of the season. Water use was partitioned into transpiration and soil evaporation and values of crop water use efficiency (WET) and transpiration efficiency ( WT) calculated. To account for the effect on WT of seasonal changes in the vapour pressure deficit of the air (D), crop coefficients (k) were derived by multiplying WT by the transpiration-weighted average daytime value of D for each genotype. During the preanthesis period, when there was little limitation of soil water supply on growth, there was a positive relationship between DM and -, as observed previously. The relationship between WET and - also had a positive (though non-significant) trend, but the relationship between k and - was negative, i.e. once the effects of variation in the ratio T/ET and seasonal changes in D were accounted for, the negative correlation between water use efficiency and - re-emerged. This apparent conflict between WET and k arose because genotypes with high - values developed their leaf area faster, with two important consequences. First, high - genotypes transpired more of their water supply during the winter when D was low and the exchange of water for CO2 more efficient. Second, transpiration made up a greater proportion of total water use by high - genotypes. The relationship between water use efficiency and - was further complicated as the crops depleted the soil water store after anthesis. During this period DM production tended to be greater in low - genotypes that had conserved soil water in the preanthesis period. However, DM production also remained high for two high - genotypes. The cause of this variation in post-anthesis growth among high - genotypes was not established.

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