Using deep convolutional neural networks to forecast spatial patterns of Amazonian deforestation

2021 ◽  
Author(s):  
James George Clifford Ball ◽  
Katerina Petrova ◽  
David Coomes ◽  
Seth Flaxman

1. Tropical forests are subject to diverse deforestation pressures but their conservation is essential to achieve global climate goals. Predicting the location of deforestation is challenging due to the complexity of the natural and human systems involved but accurate and timely forecasts could enable effective planning and on-the-ground enforcement practices to curb deforestation rates. New computer vision technologies based on deep learning can be applied to the increasing volume of Earth observation data to generate novel insights and make predictions with unprecedented accuracy. 2. Here, we demonstrate the ability of deep convolutional neural networks to learn spatiotemporal patterns of deforestation from a limited set of freely available global data layers, including multispectral satellite imagery, the Hansen maps of historic deforestation (2001-2020) and the ALOS JAXA digital surface model, to forecast future deforestation (2021). We designed four original deep learning model architectures, based on 2D Convolutional Neural Networks (2DCNN), 3D Convolutional Neural Networks (3DCNN), and Long Short-Term Memory (LSTM) Recurrent Neural Networks (RNN) to produce spatial maps that indicate the risk to each forested pixel (~30 m) in the landscape of becoming deforested within the next year.. They were trained and tested on data from two ~80,000 km2 tropical forest regions in the Southern Peruvian Amazon. 3. We found that the networks could predict the likely location of future deforestation to a high degree of accuracy. Our best performing model - a 3DCNN - had the highest pixel-wise accuracy (80-90%) when validated on 2020 deforestation based 2014-2019 training. Visual examination of the forecasts indicated that the 3DCNN network could automatically discern the drivers of forest loss from the input data. For example, pixels around new access routes (e.g. roads) were assigned high risk whereas this was not the case for recent, concentrated natural loss events (e.g. remote landslides). 4. CNNs can harness limited time-series data to predict near-future deforestation patterns, an important step in using the growing volume of satellite remote sensing data to curb global deforestation. The modelling framework can be readily applied to any tropical forest location and used by governments and conservation organisations to prevent deforestation and plan protected areas.

2021 ◽  
Vol 35 (1) ◽  
pp. 1-10
Author(s):  
Senthil Kumar Paramasivan

In the modern era, deep learning is a powerful technique in the field of wind energy forecasting. The deep neural network effectively handles the seasonal variation and uncertainty characteristics of wind speed by proper structural design, objective function optimization, and feature learning. The present paper focuses on the critical analysis of wind energy forecasting using deep learning based Recurrent neural networks (RNN) models. It explores RNN and its variants, such as simple RNN, Long Short Term Memory (LSTM), Gated Recurrent Unit (GRU), and Bidirectional RNN models. The recurrent neural network processes the input time series data sequentially and captures well the temporal dependencies exist in the successive input data. This review investigates the RNN models of wind energy forecasting, the data sources utilized, and the performance achieved in terms of the error measures. The overall review shows that the deep learning based RNN improves the performance of wind energy forecasting compared to the conventional techniques.


Author(s):  
Osama A Osman ◽  
Mustafa Hajij

Motor vehicle crashes claimed 38,800 lives and caused 4.4 million injuries in 2019 alone. Studies have shown that 94% of these crashes are because of driver errors. Such a huge contribution of driver errors to crashes indicates that efforts at improving safety should be directed toward both vehicles and drivers through advanced driver assistance systems (ADAS) and vehicular technologies. This study investigates the potential that real-time driver behavior data collected through vehicular technologies offer to predict crashes, as the first line of defense to avoid them. Three deep learning models were developed including multilayer perceptron neural networks (MLP-NN), long-short-term memory networks (LSTMN), and convolutional neural networks (CNN) using vehicle kinematics time series data extracted from the Second Strategic Highway Research Program Naturalistic Driving Study (SHRP2 NDS) dataset. The study builds on the hypothesis that crashes are preceded by turbulences that take place over time (turbulence horizon). If these turbulences are detected promptly they can help predict and avoid crashes. Several values were tested for the turbulence horizon and the prediction horizon (how long before the crash impact it can be predicted) to identify the optimal values. The results showed that the CNN model can predict all crashes with a 100% accuracy and zero false alarms 3 s before the crash impact time when a 6-s turbulence horizon is used. This outstanding performance demonstrates the developed model is a promising tool for implementation in ADAS.


2019 ◽  
Vol 1 (1) ◽  
pp. 312-340 ◽  
Author(s):  
Meike Nauta ◽  
Doina Bucur ◽  
Christin Seifert

Having insight into the causal associations in a complex system facilitates decision making, e.g., for medical treatments, urban infrastructure improvements or financial investments. The amount of observational data grows, which enables the discovery of causal relationships between variables from observation of their behaviour in time. Existing methods for causal discovery from time series data do not yet exploit the representational power of deep learning. We therefore present the Temporal Causal Discovery Framework (TCDF), a deep learning framework that learns a causal graph structure by discovering causal relationships in observational time series data. TCDF uses attention-based convolutional neural networks combined with a causal validation step. By interpreting the internal parameters of the convolutional networks, TCDF can also discover the time delay between a cause and the occurrence of its effect. Our framework learns temporal causal graphs, which can include confounders and instantaneous effects. Experiments on financial and neuroscientific benchmarks show state-of-the-art performance of TCDF on discovering causal relationships in continuous time series data. Furthermore, we show that TCDF can circumstantially discover the presence of hidden confounders. Our broadly applicable framework can be used to gain novel insights into the causal dependencies in a complex system, which is important for reliable predictions, knowledge discovery and data-driven decision making.


2019 ◽  
Vol 277 ◽  
pp. 02024 ◽  
Author(s):  
Lincan Li ◽  
Tong Jia ◽  
Tianqi Meng ◽  
Yizhe Liu

In this paper, an accurate two-stage deep learning method is proposed to detect vulnerable plaques in ultrasonic images of cardiovascular. Firstly, a Fully Convonutional Neural Network (FCN) named U-Net is used to segment the original Intravascular Optical Coherence Tomography (IVOCT) cardiovascular images. We experiment on different threshold values to find the best threshold for removing noise and background in the original images. Secondly, a modified Faster RCNN is adopted to do precise detection. The modified Faster R-CNN utilize six-scale anchors (122,162,322,642,1282,2562) instead of the conventional one scale or three scale approaches. First, we present three problems in cardiovascular vulnerable plaque diagnosis, then we demonstrate how our method solve these problems. The proposed method in this paper apply deep convolutional neural networks to the whole diagnostic procedure. Test results show the Recall rate, Precision rate, IoU (Intersection-over-Union) rate and Total score are 0.94, 0.885, 0.913 and 0.913 respectively, higher than the 1st team of CCCV2017 Cardiovascular OCT Vulnerable Plaque Detection Challenge. AP of the designed Faster RCNN is 83.4%, higher than conventional approaches which use one-scale or three-scale anchors. These results demonstrate the superior performance of our proposed method and the power of deep learning approaches in diagnose cardiovascular vulnerable plaques.


Author(s):  
Sheng Shen ◽  
M. K. Sadoughi ◽  
Xiangyi Chen ◽  
Mingyi Hong ◽  
Chao Hu

Over the past two decades, safety and reliability of lithium-ion (Li-ion) rechargeable batteries have been receiving a considerable amount of attention from both industry and academia. To guarantee safe and reliable operation of a Li-ion battery pack and build failure resilience in the pack, battery management systems (BMSs) should possess the capability to monitor, in real time, the state of health (SOH) of the individual cells in the pack. This paper presents a deep learning method, named deep convolutional neural networks, for cell-level SOH assessment based on the capacity, voltage, and current measurements during a charge cycle. The unique features of deep convolutional neural networks include the local connectivity and shared weights, which enable the model to estimate battery capacity accurately using the measurements during charge. To our knowledge, this is the first attempt to apply deep learning to online SOH assessment of Li-ion battery. 10-year daily cycling data from implantable Li-ion cells are used to verify the performance of the proposed method. Compared with traditional machine learning methods such as relevance vector machine and shallow neural networks, the proposed method is demonstrated to produce higher accuracy and robustness in capacity estimation.


2020 ◽  
Vol 3 (1) ◽  
pp. 445-454
Author(s):  
Celal Buğra Kaya ◽  
Alperen Yılmaz ◽  
Gizem Nur Uzun ◽  
Zeynep Hilal Kilimci

Pattern classification is related with the automatic finding of regularities in dataset through the utilization of various learning techniques. Thus, the classification of the objects into a set of categories or classes is provided. This study is undertaken to evaluate deep learning methodologies to the classification of stock patterns. In order to classify patterns that are obtained from stock charts, convolutional neural networks (CNNs), recurrent neural networks (RNNs), and long-short term memory networks (LSTMs) are employed. To demonstrate the efficiency of proposed model in categorizing patterns, hand-crafted image dataset is constructed from stock charts in Istanbul Stock Exchange and NASDAQ Stock Exchange. Experimental results show that the usage of convolutional neural networks exhibits superior classification success in recognizing patterns compared to the other deep learning methodologies.


Mathematics ◽  
2020 ◽  
Vol 8 (7) ◽  
pp. 1078
Author(s):  
Ruxandra Stoean ◽  
Catalin Stoean ◽  
Miguel Atencia ◽  
Roberto Rodríguez-Labrada ◽  
Gonzalo Joya

Uncertainty quantification in deep learning models is especially important for the medical applications of this complex and successful type of neural architectures. One popular technique is Monte Carlo dropout that gives a sample output for a record, which can be measured statistically in terms of average probability and variance for each diagnostic class of the problem. The current paper puts forward a convolutional–long short-term memory network model with a Monte Carlo dropout layer for obtaining information regarding the model uncertainty for saccadic records of all patients. These are next used in assessing the uncertainty of the learning model at the higher level of sets of multiple records (i.e., registers) that are gathered for one patient case by the examining physician towards an accurate diagnosis. Means and standard deviations are additionally calculated for the Monte Carlo uncertainty estimates of groups of predictions. These serve as a new collection where a random forest model can perform both classification and ranking of variable importance. The approach is validated on a real-world problem of classifying electrooculography time series for an early detection of spinocerebellar ataxia 2 and reaches an accuracy of 88.59% in distinguishing between the three classes of patients.


BMC Genomics ◽  
2019 ◽  
Vol 20 (S9) ◽  
Author(s):  
Yang-Ming Lin ◽  
Ching-Tai Chen ◽  
Jia-Ming Chang

Abstract Background Tandem mass spectrometry allows biologists to identify and quantify protein samples in the form of digested peptide sequences. When performing peptide identification, spectral library search is more sensitive than traditional database search but is limited to peptides that have been previously identified. An accurate tandem mass spectrum prediction tool is thus crucial in expanding the peptide space and increasing the coverage of spectral library search. Results We propose MS2CNN, a non-linear regression model based on deep convolutional neural networks, a deep learning algorithm. The features for our model are amino acid composition, predicted secondary structure, and physical-chemical features such as isoelectric point, aromaticity, helicity, hydrophobicity, and basicity. MS2CNN was trained with five-fold cross validation on a three-way data split on the large-scale human HCD MS2 dataset of Orbitrap LC-MS/MS downloaded from the National Institute of Standards and Technology. It was then evaluated on a publicly available independent test dataset of human HeLa cell lysate from LC-MS experiments. On average, our model shows better cosine similarity and Pearson correlation coefficient (0.690 and 0.632) than MS2PIP (0.647 and 0.601) and is comparable with pDeep (0.692 and 0.642). Notably, for the more complex MS2 spectra of 3+ peptides, MS2PIP is significantly better than both MS2PIP and pDeep. Conclusions We showed that MS2CNN outperforms MS2PIP for 2+ and 3+ peptides and pDeep for 3+ peptides. This implies that MS2CNN, the proposed convolutional neural network model, generates highly accurate MS2 spectra for LC-MS/MS experiments using Orbitrap machines, which can be of great help in protein and peptide identifications. The results suggest that incorporating more data for deep learning model may improve performance.


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