scholarly journals Experimentally-constrained biophysical models of tonic and burst firing modes in thalamocortical neurons

2019 ◽  
Author(s):  
Elisabetta Iavarone ◽  
Jane Yi ◽  
Ying Shi ◽  
Bas-Jan Zandt ◽  
Christian O’Reilly ◽  
...  

AbstractSomatosensory thalamocortical (TC) neurons from the ventrobasal (VB) thalamus are central components in the flow of sensory information between the periphery and the cerebral cortex, and participate in the dynamic regulation of thalamocortical states including wakefulness and sleep. This property is reflected at the cellular level by the ability to generate action potentials in two distinct firing modes, called tonic firing and low-threshold bursting. Although the general properties of TC neurons are known, we still lack a detailed characterization of their morphological and electrical properties in the VB thalamus. The aim of this study was to build biophysically-detailed models of VB TC neurons explicitly constrained with experimental data from rats. We recorded the electrical activity of VB neurons (N = 49) and reconstructed morphologies in 3D (N = 50) by applying standardized protocols. After identifying distinct electrical types, we used a multi-objective optimization to fit single neuron electrical models (e-models), which yielded multiple solutions consistent with the experimental data. The models were tested for generalization using electrical stimuli and neuron morphologies not used during fitting. A local sensitivity analysis revealed that the e-models are robust to small parameter changes and that all the parameters were constrained by one or more features. The e-models, when tested in combination with different morphologies, showed that the electrical behavior is substantially preserved when changing dendritic structure and that the e-models were not overfit to a specific morphology. The models and their analysis show that automatic parameter search can be applied to capture complex firing behavior, such as co-existence of tonic firing and low-threshold bursting over a wide range of parameter sets and in combination with different neuron morphologies.Author summaryThalamocortical neurons are one of the main components of the thalamocortical system, which are implicated in key functions including sensory transmission and the transition between brain states. These functions are reflected at the cellular level by the ability to generate action potentials in two distinct modes, called burst and tonic firing. Biophysically-detailed computational modeling of these cells can provide a tool to understand the role of these neurons within thalamocortical circuitry. We started by collecting single cell experimental data by applying standardized experimental procedures in brain slices of the rat. Prior work has demonstrated that biological constraints can be integrated using multi-objective optimization to build biologically realistic models of neuron. Here, we employ similar techniques as those previously employed, but extend them to capture the multiple firing modes of thalamic neurons. We compared the model results with additional experimental data test their generalization and quantitatively reject those that deviated significantly from the experimental variability. These models can be readily integrated in a data-driven pipeline to reconstruct and simulate circuit activity in the thalamocortical system.


Author(s):  
J. Schiffmann

Small scale turbomachines in domestic heat pumps reach high efficiency and provide oil-free solutions which improve heat-exchanger performance and offer major advantages in the design of advanced thermodynamic cycles. An appropriate turbocompressor for domestic air based heat pumps requires the ability to operate on a wide range of inlet pressure, pressure ratios and mass flows, confronting the designer with the necessity to compromise between range and efficiency. Further the design of small-scale direct driven turbomachines is a complex and interdisciplinary task. Textbook design procedures propose to split such systems into subcomponents and to design and optimize each element individually. This common procedure, however, tends to neglect the interactions between the different components leading to suboptimal solutions. The authors propose an approach based on the integrated philosophy for designing and optimizing gas bearing supported, direct driven turbocompressors for applications with challenging requirements with regards to operation range and efficiency. Using previously validated reduced order models for the different components an integrated model of the compressor is implemented and the optimum system found via multi-objective optimization. It is shown that compared to standard design procedure the integrated approach yields an increase of the seasonal compressor efficiency of more than 12 points. Further a design optimization based sensitivity analysis allows to investigate the influence of design constraints determined prior to optimization such as impeller surface roughness, rotor material and impeller force. A relaxation of these constrains yields additional room for improvement. Reduced impeller force improves efficiency due to a smaller thrust bearing mainly, whereas a lighter rotor material improves rotordynamic performance. A hydraulically smoother impeller surface improves the overall efficiency considerably by reducing aerodynamic losses. A combination of the relaxation of the 3 design constraints yields an additional improvement of 6 points compared to the original optimization process. The integrated design and optimization procedure implemented in the case of a complex design problem thus clearly shows its advantages compared to traditional design methods by allowing a truly exhaustive search for optimum solutions throughout the complete design space. It can be used for both design optimization and for design analysis.



2000 ◽  
Vol 84 (4) ◽  
pp. 1863-1868 ◽  
Author(s):  
Kyle L. Kirkland ◽  
Adam M. Sillito ◽  
Helen E. Jones ◽  
David C. West ◽  
George L. Gerstein

We have previously developed a model of the corticogeniculate system to explore cortically induced synchronization of lateral geniculate nucleus (LGN) neurons. Our model was based on the experiments of Sillito et al. Recently Brody discovered that the LGN events found by Sillito et al. correlate over a much longer period of time than expected from the stimulus-driven responses and proposed a cortically induced slow covariation in LGN cell membrane potentials to account for this phenomenon. We have examined the data from our model, and we found, to our surprise, that the model shows the same long-term correlation. The model's behavior was the result of a previously unsuspected oscillatory effect, not a slow covariation. The oscillations were in the same frequency range as the well-known spindle oscillations of the thalamocortical system. In the model, the strength of feedback inhibition from the cortex and the presence of low-threshold calcium channels in LGN cells were important. We also found that by making the oscillations more pronounced, we could get a better fit to the experimental data.





Author(s):  
Chunyan Bao ◽  
Liang-Wu Cai

The various optimization schemes have been recently shown to be a capable tool for designing acoustic cloaks based on Cummer-Schurig prescription without requiring material singularity. However, when using an optimization scheme to optimize a cloak at one specified frequency, sometimes it is observed that the cloaking effect deteriorate at other frequencies. This paper explores the use of multi-objective optimization approach such that the cloaking performance is maintained over a wide range of frequencies. Two examples are presented. The first cloak is comprised of all aocustic layers, and the second cloak is comprised of a mixture of acoustic and elastic layers. The results show the effectiveness of the multi-objective optimization approach on maintaining cloaking performance over a specified frequency range.



2009 ◽  
Vol 131 (9) ◽  
Author(s):  
Rajesh Kudikala ◽  
Deb Kalyanmoy ◽  
Bishakh Bhattacharya

Shape control of adaptive structures using piezoelectric actuators has found a wide range of applications in recent years. In this paper, the problem of finding optimal distribution of piezoelectric actuators and corresponding actuation voltages for static shape control of a plate is formulated as a multi-objective optimization problem. The two conflicting objectives considered are minimization of input control energy and minimization of mean square deviation between the desired and actuated shapes with constraints on the maximum number of actuators and maximum induced stresses. A shear lag model of the smart plate structure is created, and the optimization problem is solved using an evolutionary multi-objective optimization algorithm: nondominated sorting genetic algorithm-II. Pareto-optimal solutions are obtained for different case studies. Further, the obtained solutions are verified by comparing them with the single-objective optimization solutions. Attainment surface based performance evaluation of the proposed optimization algorithm has been carried out.



2019 ◽  
Vol 272 ◽  
pp. 01002
Author(s):  
Jianzhong Zhu ◽  
Xiao Wu ◽  
Jiong Shen ◽  
Meihong Wang

This paper proposes a generalized active disturbance rejection controller (GADRC) based hierarchical control structure for the boilerturbine unit. In the lower layer, a multivariable extended state observer (MESO) is developed to estimate the values of the lumped disturbances caused by modelling mismatches, fuel quality variation and wide range load variation. The influence of the disturbances is then compensated at the input side as a feedforward control. In the upper layer, the multi-objective optimization is devised to obtain the set-points by removing the plant behaviour variation from the optimized model in a feasible way. The lowpass filter acting on the lumped disturbances is designed to bridge the gap between the lower and upper layer. The impact of the feedthrough item is approximated by a first-order system and a two degree-of-freedom (2-DOF) control strategy is established to illustrate the set-point tracking and disturbance rejection properties of the controller. Simulation studies on a 1000MWe coal-fired ultra-supercritical boiler-turbine unit demonstrate that the proposed control strategy can achieve a satisfactory performance in cases of fuel quality variations, model-plant mismatches and wide range load variation.



2019 ◽  
Vol 9 (10) ◽  
pp. 2151
Author(s):  
Pengzhi Wei ◽  
Yanqiu Li ◽  
Tie Li ◽  
Naiyuan Sheng ◽  
Enze Li ◽  
...  

The continuous decrease in the size of lithographic technology nodes has led to the development of source and mask optimization (SMO) and also to the control of defocus becoming stringent in the actual lithography process. Due to multi-factor impact, defocusing is always changeable and uncertain in the real exposure process. But conventional SMO assumes the lithography system is ideal, which only compensates the optical proximity effect (OPE) in the best focus plane. Therefore, to solve the inverse lithography problem with more uniformity of pattern in different defocus variations, we proposed a defocus robust SMO (DRSMO) approach that is driven by a defocus sensitivity penalty function for the first time. This multi-objective optimization samples a wide range of defocus disturbances and it can be proceeded by the mini-batch gradient descent (MBGD) algorithm effectively. The simulation results showed that a more robust defocus source and mask can be designed through DRSMO optimization. The defocus sensitivity factor sβ maximally decreased 63.5% compared to conventional SMO, and due to the low error sensitivity and the depth of defocus (DOF), the process window (PW) was further enlarged effectively. Compared to conventional SMO, the exposure latitude (EL) maximally increased from 4.5% to 10.5% and DOF maximally increased 54.5% (EL = 5%), which proved the validity of the DRSMO method in improving the focusing performance.



2014 ◽  
Vol 974 ◽  
pp. 402-407 ◽  
Author(s):  
Akhtar Waseem ◽  
Jian Fei Su ◽  
Wu Yi Chen ◽  
Peng Fei Sun

A simple approach to multi-objective optimization of machining parameters is presented. Regression analysis of experimental data is carried out to obtain the correlation between cutting parameters and response variables. Finally, Genetic Algorithm (GA) toolbox ofMATLABis used to carry out multi-objective optimization of two objective functions (surface roughness “Ra” & material removal rate “MRR”). Genetic algorithm is found to be a powerful tool for multi-objective optimization of machining parameters in this study.



Sign in / Sign up

Export Citation Format

Share Document