scholarly journals Effects of initial microbial biomass abundance on respiration during pine litter decomposition

2019 ◽  
Author(s):  
Michaeline B.N. Albright ◽  
Andreas Runde ◽  
Deanna Lopez ◽  
Jason Gans ◽  
Sanna Sevanto ◽  
...  
Keyword(s):  
Microbial Biomass ◽  
Litter Decomposition ◽  
Microbial Growth ◽  
Plant Litter ◽  
Slight Variation ◽  
Microbial Composition ◽  
C Cycling ◽  
C Cycle ◽  
Fresh Litter

AbstractMicrobial biomass is increasingly used to predict respiration in soil organic carbon (SOC) models. Its increased use combined with the difficulty of accurately measuring this variable points a need to directly assess the importance of microbial biomass abundance for carbon (C) cycling. To test the hypothesis that the initial microbial biomass abundance (i.e. biomass abundance on new plant litter) is a strong driver of plant litter C cycling, we manipulated biomass abundance by 10 and 100-fold dilution and composition using 12 source communities on sterile pine litter and measured respiration in microcosms for 30 days. In the first two days of microbial growth on fresh litter, a 100-fold difference in initial biomass abundance caused an average difference in respiration of nearly 300%, but the effect rapidly declined to less than 30% in 10 days and to 14% in 30 days. Parallel simulations with a soil carbon model, SOMIC 1.0, also predicted a 14% difference over 30 days, consistent with the experimental results. Model simulations predicted convergence of cumulative CO2 to within 10% in three months and within 4% in three years. Rapid microbial growth likely attenuates the effects of large initial differences in biomass abundance. In contrast, the persistence of source community as an explanatory factor in driving differences in respiration across microcosms supports the importance of microbial composition in C cycling. Overall, the results suggest that the initial abundance of microbial biomass on litter is a weak driver of C flux from litter decomposition over long timescales (months to years) when litter communities have equal nutrient availability. By extension, slight variation in the timing of microbial dispersal to fresh litter is likely to be a minor factor in long-term C flux.ImportanceMicrobial biomass is one of the most common microbial parameters used in land carbon (C) cycle models, however, it is notoriously difficult to measure accurately. To understand the consequences of mismeasurement, as well as the broader importance of microbial biomass abundance as a direct driver of ecological phenomena, greater quantitative understanding of the role of microbial biomass abundance in environmental processes is needed. Using microcosms, we manipulated the initial biomass of numerous microbial communities across a 100-fold range and measured effects on CO2 production during plant litter decomposition. We found that the effects of initial biomass abundance on CO2 production was largely attenuated within a week, while the effects of community type remained significant over the course of the experiment. Overall, our results suggest that initial microbial biomass abundance in litter decomposition within an ecosystem is a weak driver of long-term C cycling dynamics.

Analysis of litter decomposition in an alpine tundra

1998 ◽  
Vol 76 (7) ◽  
pp. 1295-1304 ◽  
Author(s):  
David M Bryant ◽  
Elisabeth A Holland ◽  
Timothy R Seastedt ◽  
Marilyn D Walker
Keyword(s):  
Mass Loss ◽  
Litter Decomposition ◽  
Growing Season ◽  
Plant Litter ◽  
Decay Rates ◽  
Alpine Tundra ◽  
Litter Decay ◽  
Root Litter ◽  
Nitrogen Additions

Decomposition of plant litter regulates nutrient cycling and transfers of fixed carbon to soil organic matter pools in terrestrial ecosystems. Climate, as well as factors of intrinsic litter chemistry, often govern the rate of decomposition and thus the dynamics of these processes. Initial concentrations of nitrogen and recalcitrant carbon compounds in plant litter are good predictors of litter decomposition rates in many systems. The effect of exogenous nitrogen availability on decay rates, however, is not well defined. Microclimate factors vary widely within alpine tundra sites, potentially affecting litter decay rates at the local scale. A controlled factorial experiment was performed to assess the influence of landscape position and exogenous nitrogen additions on decomposition of surface foliage and buried root litter in an alpine tundra in the Front Range of the Rocky Mountains in Colorado, U.S.A. Litter bags were placed in three communities representing a gradient of soil moisture and temperature. Ammonium nitrate was applied once every 30 days at a rate of 20 g N·m-2 during the 3-month growing season. Data, as part of the Long-Term Inter-site Decomposition Experiment Team project, were analyzed to ascertain the effects of intrinsic nitrogen and carbon fraction chemistry on litter decay in alpine systems. Soil moisture was found to be the primary controlling factor in surface litter mass loss. Root litter did not show significant mass loss following first growing season. Nitrogen additions had no effect on nitrogen retention, or decomposition, of surface or buried root litter compared with controls. The acid-insoluble carbon fraction was a good predictor of mass loss in surface litters, showing a strong negative correlation. Curiously, N concentration appeared to retard root decomposition, although degrees of freedom limit the confidence of this observation. Given the slow rate of decay and N loss from root litter, root biomass appears to be a long-term reservoir for C and N in the alpine tundra.Key words: litter decomposition, alpine tundra, nitrogen deposition, LIDET, Niwot Ridge.

 Implementation of mycorrhizal mechanism into a soil carbon model improves the prediction of long-term processes of plant litter decomposition

2021 ◽  
Author(s):  
Weilin Huang ◽  
Peter van Bodegom ◽  
Toni Viskari ◽  
Jari Liski ◽  
Nadejda Soudzilovskaia
Keyword(s):  
Soil Carbon ◽  
Litter Decomposition ◽  
Arbuscular Mycorrhizae ◽  
Plant Litter ◽  
Climate Impacts ◽  
Microbial Interactions ◽  
Soil C ◽  
Plant Litter Decomposition ◽  
C Dynamics

<p>Mycorrhizae, a plant-fungal symbiosis, is an important contributor to below ground-microbial interactions, and hypothesized to play a paramount role in soil carbon (C) sequestration. Ectomycorrhizae (EM) and arbuscular mycorrhizae (AM) are the two dominant forms of mycorrhizae featured by nearly all Earth plant species. However, the difference in the nature of their contributions to the processes of plant litter decomposition is still understood poorly. Current soil carbon models treat mycorrhizal impacts on the processes of soil carbon transformation as a black box. This retards scientific progress in mechanistic understanding of soil C dynamics.</p><p>We examined four alternative conceptualizations of the mycorrhizal impact on plant litter C transformations, by integrating AM and EM fungal impacts on litter C pools of different recalcitrance into the soil carbon model Yasso15. The best performing concept featured differential impacts of EM and AM on a combined pool of labile C, being quantitatively distinct from impacts of AM and EM on a pool of recalcitrant C.</p><p>Analysis of time dynamics of mycorrhizal impacts on soil C transformations demonstrated that these impacts are larger at the long-term (>2.5yrs) litter decomposition processes, compared to the short-term processes. We detected that arbuscular mycorrhizae controls shorter term decomposition of labile carbon compounds, while ectomycorrhizae dominate the long term decomposition processes of highly recalcitrant carbon elements. Overall, adding our mycorrhizal module into the Yasso model greatly improved the accuracy of the temporal dynamics of carbon sequestration.</p><p>A sensitivity analysis of litter decomposition to climate and mycorrhizal factors indicated that ignoring the mycorrhizal impact on the decomposition leads to an overestimation of climate impacts. This suggests that being co-linear with climate impacts, mycorrhizal impacts could be partly hidden within climate factors in soil carbon models, reducing the capability of such models to mechanistically predict impacts of climate vs vegetation change on soil carbon dynamics.</p><p>Our results provide a benchmark to mechanistic modelling of microbial impacts on soil C dynamics. This work opens new pathways to examining the impacts of land-use change and climate change on plant-microbial interactions and their role in soil C dynamics, allowing the integration of microbial processes into global vegetation models used for policy decisions on terrestrial carbon monitoring.</p>

scholarly journals Long-term litter decomposition controlled by manganese redox cycling

2015 ◽  
Vol 112 (38) ◽  
pp. E5253-E5260 ◽  
Author(s):  
Marco Keiluweit ◽  
Peter Nico ◽  
Mark E. Harmon ◽  
Jingdong Mao ◽  
Jennifer Pett-Ridge ◽  
...  
Keyword(s):  
Litter Decomposition ◽  
Forest Ecosystems ◽  
Coniferous Forest ◽  
Direct Proof ◽  
Redox Cycling ◽  
Plant Litter ◽  
Forest Site ◽  
Decomposition Rates ◽  
Soil System

Litter decomposition is a keystone ecosystem process impacting nutrient cycling and productivity, soil properties, and the terrestrial carbon (C) balance, but the factors regulating decomposition rate are still poorly understood. Traditional models assume that the rate is controlled by litter quality, relying on parameters such as lignin content as predictors. However, a strong correlation has been observed between the manganese (Mn) content of litter and decomposition rates across a variety of forest ecosystems. Here, we show that long-term litter decomposition in forest ecosystems is tightly coupled to Mn redox cycling. Over 7 years of litter decomposition, microbial transformation of litter was paralleled by variations in Mn oxidation state and concentration. A detailed chemical imaging analysis of the litter revealed that fungi recruit and redistribute unreactive Mn2+provided by fresh plant litter to produce oxidative Mn3+species at sites of active decay, with Mn eventually accumulating as insoluble Mn3+/4+oxides. Formation of reactive Mn3+species coincided with the generation of aromatic oxidation products, providing direct proof of the previously posited role of Mn3+-based oxidizers in the breakdown of litter. Our results suggest that the litter-decomposing machinery at our coniferous forest site depends on the ability of plants and microbes to supply, accumulate, and regenerate short-lived Mn3+species in the litter layer. This observation indicates that biogeochemical constraints on bioavailability, mobility, and reactivity of Mn in the plant–soil system may have a profound impact on litter decomposition rates.

scholarly journals Comparing models of microbial–substrate interactions and their response to warming

2016 ◽  
Vol 13 (6) ◽  
pp. 1733-1752 ◽  
Author(s):  
Debjani Sihi ◽  
Stefan Gerber ◽  
Patrick W. Inglett ◽  
Kanika Sharma Inglett
Keyword(s):  
Microbial Biomass ◽  
Organic Carbon ◽  
Soil Organic Carbon ◽  
Positive Feedback ◽  
Enzyme Production ◽  
Microbial Growth ◽  
Quasi Equilibrium ◽  
Short Term ◽  
First Order

Abstract. Recent developments in modelling soil organic carbon decomposition include the explicit incorporation of enzyme and microbial dynamics. A characteristic of these models is a positive feedback between substrate and consumers, which is absent in traditional first-order decay models. With sufficiently large substrate, this feedback allows an unconstrained growth of microbial biomass. We explore mechanisms that curb unrestricted microbial growth by including finite potential sites where enzymes can bind and by allowing microbial scavenging for enzymes. We further developed a model where enzyme synthesis is not scaled to microbial biomass but associated with a respiratory cost and microbial population adjusts enzyme production in order to optimise their growth. We then tested short- and long-term responses of these models to a step increase in temperature and find that these models differ in the long-term when short-term responses are harmonised. We show that several mechanisms, including substrate limitation, variable production of microbial enzymes, and microbes feeding on extracellular enzymes eliminate oscillations arising from a positive feedback between microbial biomass and depolymerisation. The model where enzyme production is optimised to yield maximum microbial growth shows the strongest reduction in soil organic carbon in response to warming, and the trajectory of soil carbon largely follows that of a first-order decomposition model. Modifications to separate growth and maintenance respiration generally yield short-term differences, but results converge over time because microbial biomass approaches a quasi-equilibrium with the new conditions of carbon supply and temperature.

scholarly journals Among- and within-species variation in plant litter decomposition in contrasting long-term chronosequences

2009 ◽  
Vol 23 (2) ◽  
pp. 442-453 ◽  
Author(s):  
David A. Wardle ◽  
Richard D. Bardgett ◽  
Lawrence R. Walker ◽  
Karen I. Bonner
Keyword(s):  
Litter Decomposition ◽  
Plant Litter ◽  
Species Variation ◽  
Plant Litter Decomposition

scholarly journals Implementation of mycorrhizal mechanisms into soil carbon model improves the prediction of long-term processes of plant litter decomposition

2021 ◽  
Author(s):  
Weilin Huang ◽  
Peter M. van Bodegom ◽  
Toni Viskari ◽  
Jari Liski ◽  
Nadejda A. Soudzilovskaia
Keyword(s):  
Carbon Sequestration ◽  
Soil Carbon ◽  
Litter Decomposition ◽  
Arbuscular Mycorrhizae ◽  
Temporal Dynamics ◽  
Plant Litter ◽  
Climate Impacts ◽  
Plant Litter Decomposition ◽  
Mycorrhizal Associations

Abstract. Ecosystems dominated by plants featuring ectomycorrhizae (EM) and arbuscular mycorrhizae (AM) promote distinct soil carbon dynamics. AM and EM soil environments can thus have different impacts on litter decomposition. However, current soil carbon models treat mycorrhizal impacts on the processes of soil carbon transformation as a black box. We re-formulated the soil carbon model Yasso15, and incorporated impacts of mycorrhizal vegetation on soil carbon pools of different recalcitrance. We examined alternative conceptualizations of mycorrhizal impacts on transformations of labile and stable carbon, and quantitatively assessed the performance of the selected optimal model in terms of the long-term fate of plant litter. We found that mycorrhizal impacts on pools of labile carbon in the litter are distinct from that on recalcitrant pools. Plant litter of the same chemical composition decomposes slower when exposed to EM-dominated ecosystems compared to AM-dominated ones, and across time, EM-dominated ecosystems accumulate more recalcitrant residues of non-decomposed litter. Overall, adding our mycorrhizal module into the Yasso model improved the accuracy of the temporal dynamics of carbon sequestration predictions. Our results suggest that mycorrhizal impacts on litter decomposition are underpinned by distinct decomposition pathways in AM- and EM-dominated ecosystems. Ignoring mycorrhiza-induced mechanisms will thus lead to an overestimation of climate impacts on decomposition dynamics. Our new model provides a benchmark for mechanistic and quantitative modelling of microbial impact on soil carbon. It helps to determine the relative importance of mycorrhizal associations and climate on organic matter decomposition rate and reduces the uncertainties in estimating soil carbon sequestration.

Influence of long-term fertilization on soil microbial biomass and dehydrogenase activity in relation to crop productivity in an acid Inceptisols

2019 ◽  
Vol 56 (3) ◽  
pp. 305-311
Author(s):  
Debasis Purohit ◽  
Mitali Mandal ◽  
Avisek Dash ◽  
Kumbha Karna Rout ◽  
Narayan Panda ◽  
...  
Keyword(s):  
Microbial Biomass ◽  
Dehydrogenase Activity ◽  
Nutrient Content ◽  
Crop Productivity ◽  
Maturity Stage ◽  
Microbial Biomass Nitrogen ◽  
Biological Potential ◽  
Initiation Stage ◽  
The Impact

An effective approach for improving nutrient use efficiency and crop productivity simultaneously through exploitation of biological potential for efficient acquisition and utilization of nutrients by crops is very much needed in this current era. Thus, an attempt is made here to investigate the impact of long term fertilization in the soil ecology in rice-rice cropping system in post kharif - 2015 in flooded tropical rice (Oryza sativa L.) in an acidic sandy soil. The experiment was laid out in a randomized block design with quadruplicated treatments. Soil samples at different growth stages of rice were collected from long term fertilizer experiment.The studied long-term manured treatments included 100 % N, 100% NP, 100 % NPK, 150 % NPK and 100 % NPK+FYM (5 t ha-1) and an unmanured control. Soil fertility status like SOC content and other available nutrient content has decreased continuously towards the crop growth period. Comparing the results of different treatments, it was found that the application of 100% NPK + FYM exhibited highest nutrient content in soils. With regards to microbial properties it was also observed that the amount of microbial biomass carbon (MBC) and microbial biomass nitrogen ( MBN) showed highest accumulation in 100 % NPK + FYM at maximum tillering stage of the rice. The results further reveal that dehydrogenase activity was maximum at panicle initiation stage and thereafter it decreases. Soil organic carbon content, MBC, MBN and dehydrogenase activity were significantly correlated with each other. Significant correlations were observed between rice yield and MBC at maturity stage( R2 = 0.94**) and panicle initiation stage( R2 = 0.92**) and available nitrogen content at maturity stage( R2 = 0.91**).

scholarly journals Long-Term Nitrogen Addition Decreases Soil Carbon Mineralization in an N-Rich Primary Tropical Forest

Forests ◽  
2021 ◽  
Vol 12 (6) ◽  
pp. 734
Author(s):  
Xiankai Lu ◽  
Qinggong Mao ◽  
Zhuohang Wang ◽  
Taiki Mori ◽  
Jiangming Mo ◽  
...  
Keyword(s):  
Microbial Biomass ◽  
Organic Carbon ◽  
Tropical Forest ◽  
Soil Carbon ◽  
Tropical Forests ◽  
Carbon Mineralization ◽  
N Deposition ◽  
Soil Carbon Mineralization ◽  
N Additions

Anthropogenic elevated nitrogen (N) deposition has an accelerated terrestrial N cycle, shaping soil carbon dynamics and storage through altering soil organic carbon mineralization processes. However, it remains unclear how long-term high N deposition affects soil carbon mineralization in tropical forests. To address this question, we established a long-term N deposition experiment in an N-rich lowland tropical forest of Southern China with N additions such as NH4NO3 of 0 (Control), 50 (Low-N), 100 (Medium-N) and 150 (High-N) kg N ha−1 yr−1, and laboratory incubation experiment, used to explore the response of soil carbon mineralization to the N additions therein. The results showed that 15 years of N additions significantly decreased soil carbon mineralization rates. During the incubation period from the 14th day to 56th day, the average decreases in soil CO2 emission rates were 18%, 33% and 47% in the low-N, medium-N and high-N treatments, respectively, compared with the Control. These negative effects were primarily aroused by the reduced soil microbial biomass and modified microbial functions (e.g., a decrease in bacteria relative abundance), which could be attributed to N-addition-induced soil acidification and potential phosphorus limitation in this forest. We further found that N additions greatly increased soil-dissolved organic carbon (DOC), and there were significantly negative relationships between microbial biomass and soil DOC, indicating that microbial consumption on soil-soluble carbon pool may decrease. These results suggests that long-term N deposition can increase soil carbon stability and benefit carbon sequestration through decreased carbon mineralization in N-rich tropical forests. This study can help us understand how microbes control soil carbon cycling and carbon sink in the tropics under both elevated N deposition and carbon dioxide in the future.

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