scholarly journals M 4Au12Ag32(p-MBA)30 (M = Na, Cs) bimetallic monolayer-protected clusters: synthesis and structure

Author(s):  
Brian E. Conn ◽  
Badri Bhattarai ◽  
Aydar Atnagulov ◽  
Bokwon Yoon ◽  
Uzi Landman ◽  
...  

Crystals of M 4Au12Ag32(p-MBA)30 bimetallic monolayer-protected clusters (MPCs), where p-MBA is p-mercaptobenzoic acid and M + is a counter-cation (M = Na, Cs) have been grown and their structure determined. The molecular structure of triacontakis[(4-carboxylatophenyl)sulfanido]dodecagolddotriacontasilver, Au12Ag32(C7H5O2S)30 or C210H150Ag32Au12O60S30, exhibits point group symmetry 3 at 100 K. The overall diameter of the MPC is approximately 28 Å, while the diameter of the Au12Ag20 metallic core is 9 Å. The structure displays ligand bundling and intermolecular hydrogen bonding, which gives rise to a framework structure with 52% solvent-filled void space. The positions of the M + cations and the DMF solvent molecules within the void space of the crystal could not be determined. Three out of the five crystallographically independent ligands in the asymmetric unit cell are disordered over two sets of sites. Comparisons are made to the all-silver M 4Ag44(p-MBA)30 MPCs and to expectations based on density functional theory.

2013 ◽  
Vol 69 (10) ◽  
pp. 1112-1115 ◽  
Author(s):  
Rüdiger W. Seidel ◽  
Christina Dietz ◽  
Jürgen Breidung ◽  
Richard Goddard ◽  
Iris M. Oppel

The title compound, [Zn(SiF6)(C12H8N2)2]·CH3OH, contains a neutral heteroleptic tris-chelate ZnIIcomplex,viz.[Zn(SiF6)(phen)2] (phen is 1,10-phenanthroline), exhibiting approximate molecularC2point-group symmetry. The ZnIIcation adopts a severely distorted octahedral coordination. As far as can be ascertained, the title complex represents the first structurally characterized example of a ZnIIcomplex bearing a bidentate-bound hexafluorosilicate ligand. A density functional theory study of the isolated [Zn(SiF6)(phen)2] complex was undertaken to reveal the influence of crystal packing on the molecular structure of the complex. In the crystal structure, the methanol solvent molecule forms a hydrogen bond to one F atom of the hexafluorosilicate ligand. The hydrogen-bonded assemblies so formed are tightly packed in the crystal, as indicated by a high packing coefficient (74.1%).


Molecules ◽  
2020 ◽  
Vol 25 (20) ◽  
pp. 4742
Author(s):  
Jan Bloch ◽  
Stefan Kradolfer ◽  
Thomas L. Gianetti ◽  
Detlev Ostendorf ◽  
Subal Dey ◽  
...  

The synthesis, isolation and full characterization of ion pairs between alkaline metal ions (Li+, Na+, K+) and mono-anions and dianions obtained from 5H-dibenzo[a,d]cycloheptenyl (C15H11 = trop) is reported. According to Nuclear Magnetic Resonance (NMR) spectroscopy, single crystal X-ray analysis and Density Functional Theory (DFT) calculations, the trop‒ and trop2−• anions show anti-aromatic properties which are dependent on the counter cation M+ and solvent molecules serving as co-ligands. For comparison, the disodium and dipotassium salt of the dianion of dibenzo[a,e]cyclooctatetraene (C16H12 = dbcot) were prepared, which show classical aromatic character. A d8-Rh(I) complex of trop− was prepared and the structure shows a distortion of the C15H11 ligand into a conjugated 10π -benzo pentadienide unit—to which the Rh(I) center is coordinated—and an aromatic 6π electron benzo group which is non-coordinated. Electron transfer reactions between neutral and anionic trop and dbcot species show that the anti-aromatic compounds obtained from trop are significantly stronger reductants.


2020 ◽  
Vol 62 (8) ◽  
pp. 1270
Author(s):  
З.А. Джахангирли ◽  
Т.Г. Керимова ◽  
И.А. Мамедова ◽  
С.А. Набиева ◽  
Н.А. Абдуллаев

The electronic, optical, and lattice vibrational properties of CdGa2Te4 were studied experimentally using spectral ellipsometry, Raman scattering (Raman scattering) and infrared (IR) spectroscopy, as well as theoretically using the density functional theory (DFT). Eight Raman-active modes and twelve IR-active modes were detected and identified from consideration of the point group symmetry. Based on the analysis of the electronic spectrum and the density of states, the nature of the chemical bond in this semiconductor compound is determined. The theoretically calculated results are compared with the experimental data of the present work and with the results of experimental data available in the literature obtained by infrared spectroscopy and Raman scattering.


2021 ◽  
Vol 21 (4) ◽  
pp. 2419-2426
Author(s):  
Csaba L. Nagy ◽  
Katalin Nagy

Fullerenes that violate the isolated pentagon rule are too reactive and were obtained only as endoor exohedral derivatives. Density functional theory using the B3LYP hybrid density functional was applied to investigate the electronic and structural properties of the ten smallest tetrahedral (Td or T point group) fullerenes containing four directly fused pentagon-triples. The influence of nitrogen doping and exohedral hydrogenation of the four reactive sites was also analyzed. Nucleus independent chemical shifts values computed using B3LYP/6-31G(d) are used as global and local aromaticity probe. The global strain energy is evaluated in terms of the pyramidalization (POAV) angle. The results show that the stability increases with the elimination of the energetically unfavorable strain.


Author(s):  
John A. Tossell ◽  
David J. Vaughan

In this chapter, the most important quantum-mechanical methods that can be applied to geological materials are described briefly. The approach used follows that of modern quantum-chemistry textbooks rather than being a historical account of the development of quantum theory and the derivation of the Schrödinger equation from the classical wave equation. The latter approach may serve as a better introduction to the field for those readers with a more limited theoretical background and has recently been well presented in a chapter by McMillan and Hess (1988), which such readers are advised to study initially. Computational aspects of quantum chemistry are also well treated by Hinchliffe (1988). In the section that follows this introduction, the fundamentals of the quantum mechanics of molecules are presented first; that is, the “localized” side of Fig. 1.1 is examined, basing the discussion on that of Levine (1983), a standard quantum-chemistry text. Details of the calculation of molecular wave functions using the standard Hartree-Fock methods are then discussed, drawing upon Schaefer (1972), Szabo and Ostlund (1989), and Hehre et al. (1986), particularly in the discussion of the agreement between calculated versus experimental properties as a function of the size of the expansion basis set. Improvements on the Hartree-Fock wave function using configuration-interaction (CI) or many-body perturbation theory (MBPT), evaluation of properties from Hartree-Fock wave functions, and approximate Hartree-Fock methods are then discussed. The focus then shifts to the “delocalized” side of Fig. 1.1, first discussing Hartree-Fock band-structure studies, that is, calculations in which the full translational symmetry of a solid is exploited rather than the point-group symmetry of a molecule. A good general reference for such studies is Ashcroft and Mermin (1976). Density-functional theory is then discussed, based on a review by von Barth (1986), and including both the multiple-scattering self-consistent-field Xα method (MS-SCF-Xα) and more accurate basis-function-density-functional approaches. We then describe the success of these methods in calculations on molecules and molecular clusters. Advances in density-functional band theory are then considered, with a presentation based on Srivastava and Weaire (1987). A discussion of the purely theoretical modified electron-gas ionic models is followed by discussion of empirical simulation, and we conclude by mentioning a recent approach incorporating density-functional theory and molecular dynamics (Car and Parrinello, 1985).


2020 ◽  
Vol 31 (5) ◽  
pp. 1717-1728
Author(s):  
Krzysztof K. Zborowski ◽  
Halina Szatyłowicz ◽  
Tadeusz M. Krygowski

Abstract Theoretical density functional theory (B3LYP/6-31G**) was used to study the intra- and intermolecular interactions of nitrobenzene, aniline, and meta and para nitroaniline in various solvation models. The studied molecules were solvated by one or two water molecules in the presence of continuum solvation (the PCM model) or without it. Finally, the studied molecules were surrounded by a cluster of water molecules. For comparison, calculations were also made for separated molecules. Geometries, energies, hydrogen bonding between solutes and solvent molecules, atomic charges, and aromaticity were examined. The analysis was based on the Atoms in Molecules methodology and the Harmonic Oscillator Model of Aromaticity (HOMA) index. As a result, an extensive description of the solvation of nitro and amino groups and the effect of solvation on mutual interactions between these groups in meta and para nitroanilines is provided. It was found that in general, the PCM description of the hydration effect on the electronic structure of the studied systems (substituents) is consistent with the approach taking into account all individual interactions (cluster model).


2015 ◽  
Vol 19 (2) ◽  
pp. 14-18
Author(s):  
Nurapati Pantha ◽  
Narayan Prasad Adhikari

We study the change in structural properties of ice by taking initial structure of “ice VIII”, with space group symmetry I41/amd, as a function of elevating pressure up to 120 GPa in density-functional theory (DFT) level of calculations implemented by Quantum ESPRESSO package. Consistent with the standard laws of thermodynamics, our calculations show that the physical size (volume and cell parameters) of the unit cell compresses monotonically on increasing pressure. We also compare our DFT results of these parameters with the available experimental values performed at finite temperature. The comparison shows good agreement between the quantities, within 5%, with slightly higher experimental values. At 100 GPa of pressure, hydrogen atom comes exactly at the midpoint of two boneded oxygens, called hydrogen-bonded symmetrization, which at low pressure remains nearby one of the oxygens. This symmmetrized structure is characterized by a new phase of the system known as “ice X” and the boundary pressure, 100 GPa, defines the transition pressure (P0) for changing phase from “ice VIII” to “ice X”. The transition pressure (P0) of the present work agrees well within 2% of previously reported results.Journal of Institute of Science and Technology, 2014, 19(2): 14-19Journal of Institute of Science and Technology, 2014, 19(2): 14-18


2014 ◽  
Vol 2014 ◽  
pp. 1-10 ◽  
Author(s):  
Alejandro Morales-Bayuelo ◽  
Ricardo Vivas-Reyes

A theoretical study on the molecular polarization of thiophene and furan under the action of an electric field using Local Quantum Similarity Indexes (LQSI) was performed. This model is based on Hirshfeld partitioning of electron density within the framework of Density Functional Theory (DFT). Six local similarity indexes were used: overlap, overlap-interaction, coulomb, coulomb-interaction, Euclidian distances of overlap, and Euclidean distances of coulomb. In addition Topo-Geometrical Superposition Algorithm (TGSA) was used as a method of alignment. This method provides a straightforward procedure to solve the problem of molecular relative orientation. It provides a tool to evaluate molecular quantum similarity, enabling the study of structural systems, which differ in only one atom such as thiophene and furan (point group C2v) and cyclopentadienyl molecule (point group D5h). Additionally, this model can contribute to the interpretation of chemical bonds, and molecular interactions in the framework of the solvent effect theory.


2021 ◽  
Author(s):  
Croix Laconsay ◽  
Anna Pla-Quintana ◽  
Dean Tantillo

Density functional theory calculations were used to systematically explore the effects of axial ligation by solvent molecules on the reactivity and selectivity of dirhodium tetracarboxylates with diazo compounds in the context of C–H insertion into propane. Insertions on three types of diazo compounds—acceptor/acceptor, donor/acceptor, and donor/donor—promoted by dirhodium tetraformate were tested with and without axial solvent ligation for no surrounding solvent, dichloromethane, isopropanol, and acetonitrile. Magnitudes, origins, and consequences of structural and electronic changes arising from axial ligation were characterized. The results suggest that axial ligation affects barriers for N2 extrusion and C–H insertion, the former to a larger extent.


2020 ◽  
Vol 73 (3) ◽  
pp. 222
Author(s):  
Frederick Backler ◽  
Feng Wang

Intramolecular hydrogen bonding of 2-methoxyphenol (2-MP, guaiacol) is studied using NMR spectroscopy combined with quantum mechanical density functional theory (DFT) calculations. The hydrogen bonding of OH⋯O and HO⋯H is switched on in the conformers of anti–syn (AS, 99.64% dominance) and anti–gauche (AG), respectively, with respect to the anti–anti (AA) conformer (without either such hydrogen bonding interactions). It confirms that the 13C and 1H NMR chemical shift of AS dominates the measured NMR spectra, as the AS conformer reproduces the measurements in CDCl3 solvent (RMSD of 1.86ppm for 13C NMR and of 0.27ppm for 1H NMR). The chemical shift of hydroxyl H(1) at 5.66 pm is identified as the fingerprint of the OH(1)⋯OCH3 hydrogen bonding in AS, as it exhibits a significant deshielding from H(1) of AA (4.24ppm) and H(1) of AG (4.38ppm) without such OH(1)⋯OCH3 hydrogen bonding. The AG conformer (C1 point group symmetry) possesses a less strong hydrogen bonding of HO⋯HCH2O, with the methoxyl group out of the aromatic phenol plane. The substituent effect of AG due to the resonance interaction of methoxyl being out of plane in a concentrated solution shifts the ortho- and para-aromatic carbons, C(3)/C(5), of the AG to ~125.05/125.44ppm from the corresponding carbons in AS at 108.81/121.60ppm. The hydrogen bonding exhibits inwards reduction of IR frequency regions of AS and AG from AA. Finally, energy decomposition analysis (EDA) indicates that there is a steric energy of 45.01kcal mol−1 between the AS and AG when different intramolecular hydrogen bonding is switched on.


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