Minor impact of ocean acidification to the composition of the active microbial community in an Arctic sediment

2013 ◽  
Vol 5 (6) ◽  
pp. 851-860 ◽  
Author(s):  
Karen Tait ◽  
Bonnie Laverock ◽  
Jennifer Shaw ◽  
Paul J. Somerfield ◽  
Steve Widdicombe
2017 ◽  
Vol 14 (16) ◽  
pp. 3831-3849 ◽  
Author(s):  
Katharine J. Crawfurd ◽  
Santiago Alvarez-Fernandez ◽  
Kristina D. A. Mojica ◽  
Ulf Riebesell ◽  
Corina P. D. Brussaard

Abstract. Ocean acidification resulting from the uptake of anthropogenic carbon dioxide (CO2) by the ocean is considered a major threat to marine ecosystems. Here we examined the effects of ocean acidification on microbial community dynamics in the eastern Baltic Sea during the summer of 2012 when inorganic nitrogen and phosphorus were strongly depleted. Large-volume in situ mesocosms were employed to mimic present, future and far future CO2 scenarios. All six groups of phytoplankton enumerated by flow cytometry ( <  20 µm cell diameter) showed distinct trends in net growth and abundance with CO2 enrichment. The picoeukaryotic phytoplankton groups Pico-I and Pico-II displayed enhanced abundances, whilst Pico-III, Synechococcus and the nanoeukaryotic phytoplankton groups were negatively affected by elevated fugacity of CO2 (fCO2). Specifically, the numerically dominant eukaryote, Pico-I, demonstrated increases in gross growth rate with increasing fCO2 sufficient to double its abundance. The dynamics of the prokaryote community closely followed trends in total algal biomass despite differential effects of fCO2 on algal groups. Similarly, viral abundances corresponded to prokaryotic host population dynamics. Viral lysis and grazing were both important in controlling microbial abundances. Overall our results point to a shift, with increasing fCO2, towards a more regenerative system with production dominated by small picoeukaryotic phytoplankton.


2020 ◽  
Vol 10 (1) ◽  
Author(s):  
Katie S. Nelson ◽  
Federico Baltar ◽  
Miles D. Lamare ◽  
Sergio E. Morales

2016 ◽  
Author(s):  
K .J. Crawfurd ◽  
C .P. D. Brussaard ◽  
U. Riebesell

Abstract. Ocean acidification, due to dissolution of anthropogenically produced carbon dioxide is considered a major threat to marine ecosystems. The Baltic Sea, with extremely low salinity and thus low pH buffering capacity, is likely to experience stronger variation in pH than the open ocean with increasing atmospheric carbon dioxide. We examined the effects of ocean acidification on the microbial community during summer using large volume in situ mesocosms to simulate present to future and far future scenarios. We saw distinct trends with increasing CO2 in each of the 6 groups of phytoplankton with diameters below 20 μm that we enumerated by flow cytometry. Of these groups two picoeukaryotic groups increased in abundance whilst the other groups, including prokaryotic Synechococcus spp., decreased with increasing CO2. Gross growth rates increased with increasing CO2 in the dominant picoeukaryote group sufficient to double their abundances whilst reduced grazing allowed the other picoeukaryotes to flourish at higher CO2. Significant increases in lysis rates were seen at higher CO2 in these two picoeukaryote groups. Converting abundances to particulate organic carbon we saw a large shift in the partitioning of carbon between the size fractions which lasted throughout the experiment. The heterotrophic prokaryotes largely followed the algal biomass with responses to increasing CO2 reflecting the altered phytoplankton community dynamics. Similarly, higher viral abundances at higher CO2 seemed related to increased prokaryote biomass. Viral lysis and grazing were equally important controlling prokaryotic abundances. Overall our results point to a shift towards a more regenerative system with potentially increased productivity but reduced carbon export.


2018 ◽  
Vol 115 (11) ◽  
pp. 2670-2675 ◽  
Author(s):  
Dirk Schulze-Makuch ◽  
Dirk Wagner ◽  
Samuel P. Kounaves ◽  
Kai Mangelsdorf ◽  
Kevin G. Devine ◽  
...  

Traces of life are nearly ubiquitous on Earth. However, a central unresolved question is whether these traces always indicate an active microbial community or whether, in extreme environments, such as hyperarid deserts, they instead reflect just dormant or dead cells. Although microbial biomass and diversity decrease with increasing aridity in the Atacama Desert, we provide multiple lines of evidence for the presence of an at times metabolically active, microbial community in one of the driest places on Earth. We base this observation on four major lines of evidence: (i) a physico-chemical characterization of the soil habitability after an exceptional rain event, (ii) identified biomolecules indicative of potentially active cells [e.g., presence of ATP, phospholipid fatty acids (PLFAs), metabolites, and enzymatic activity], (iii) measurements of in situ replication rates of genomes of uncultivated bacteria reconstructed from selected samples, and (iv) microbial community patterns specific to soil parameters and depths. We infer that the microbial populations have undergone selection and adaptation in response to their specific soil microenvironment and in particular to the degree of aridity. Collectively, our results highlight that even the hyperarid Atacama Desert can provide a habitable environment for microorganisms that allows them to become metabolically active following an episodic increase in moisture and that once it decreases, so does the activity of the microbiota. These results have implications for the prospect of life on other planets such as Mars, which has transitioned from an earlier wetter environment to today’s extreme hyperaridity.


2018 ◽  
Vol 43 (11) ◽  
pp. 5473-5485 ◽  
Author(s):  
Paolo Dessì ◽  
Estefania Porca ◽  
Nicholas R. Waters ◽  
Aino-Maija Lakaniemi ◽  
Gavin Collins ◽  
...  

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