scholarly journals Input of Protein to Lake Water Microcosms Affects Expression of Proteolytic Enzymes and the Dynamics ofPseudomonas spp

2001 ◽  
Vol 67 (11) ◽  
pp. 4955-4962 ◽  
Author(s):  
Jakob Worm ◽  
Ole Nybroe

ABSTRACT The objective of this study was to determine how an input of protein to lake water affects expression of a proteolytic potential and influences the abundance and composition of a specific group of bacteria. Pseudomonas spp. were chosen as a target group that can be recovered on selective growth media and contain both proteolytic and nonproteolytic strains. Amendment with 2 mg of casein per liter increased total proteinase activity (hydrolysis of [3H]casein) by 74%, leucine-aminopeptidase activity (hydrolysis of leucine-methyl-coumarinylamide) by 133%, bacterial abundance by 44%, and phytoplankton biomass (chlorophylla) by 39%. The casein amendment also increased the abundance of culturable Pseudomonas spp. by fivefold relative to control microcosms but did not select for proteolytic isolates. Soluble proteins immunochemically related to thePseudomonas fluorescens alkaline proteinase, AprX, were detected in amended microcosms but not in the controls. The expression of this class of proteinase was confirmed exclusively for proteolyticPseudomonas isolates from the microcosms. The population structure of Pseudomonas isolates was determined from genomic fingerprints generated by universally primed PCR, and the analysis indicated that casein amendment led to only minor shifts in population structure. The appearance of AprX-like proteinases in the lake water might thus reflect a general induction of enzyme expression rather than pronounced shifts in the Pseudomonaspopulation structure. The limited effect of casein amendment onPseudomonas population structure might be due to the availability of casein hydrolysates to bacteria independent of their proteinase expression. In the lake water, 44% of the total proteinase activity was recovered in 0.22-μm-pore-size filtrates and thus without a direct association with the bacteria providing the extracellular enzyme activity. Since all Pseudomonasisolates expressed leucine-aminopeptidase in pure culture, proteolytic as well as nonproteolytic pseudomonads were likely members of the bacterial consortium that metabolized protein in the lake water.

2020 ◽  
Vol 84 ◽  
pp. 127-140
Author(s):  
BM Gaas ◽  
JW Ammerman

Leucine aminopeptidase (LAP) is one of the enzymes involved in the hydrolysis of peptides, and is sometimes used to indicate potential nitrogen limitation in microbes. Small-scale variability has the potential to confound interpretation of underlying patterns in LAP activity in time or space. An automated flow-injection analysis instrument was used to address the small-scale variability of LAP activity within contiguous regions of the Hudson River plume (New Jersey, USA). LAP activity had a coefficient of variation (CV) of ca. 0.5 with occasional values above 1.0. The mean CVs for other biological parameters—chlorophyll fluorescence and nitrate concentration—were similar, and were much lower for salinity. LAP activity changed by an average of 35 nmol l-1 h-1 at different salinities, and variations in LAP activity were higher crossing region boundaries than within a region. Differences in LAP activity were ±100 nmol l-1 h-1 between sequential samples spaced <10 m apart. Variogram analysis indicated an inherent spatial variability of 52 nmol l-1 h-1 throughout the study area. Large changes in LAP activity were often associated with small changes in salinity and chlorophyll fluorescence, and were sensitive to the sampling frequency. This study concludes that LAP measurements in a sample could realistically be expected to range from zero to twice the average, and changes between areas or times should be at least 2-fold to have some degree of confidence that apparent patterns (or lack thereof) in activity are real.


1991 ◽  
Vol 58 (1) ◽  
pp. 137-145 ◽  
Author(s):  
Teresa Requena ◽  
Carmen Peláez ◽  
Michel J. Desmazeaud

SummarySeveral strains ofLactococcus lactissubsp.lactis, Lactobacillus caseiandLactobacillus plantarumisolated from traditional goats' cheese have been studied for titratable acidity, proteolysis in milk and enzymic activities. Aminopeptidasc activities were measured with whole cells and cells permeabilized with Triton X-100. Caseinolytic activity was investigated using electrophoresis in polyacrylamide gel with sodium dodecyl sulphate.Lc. lactissubsp.lactishad a level of proteolytic activity in skim milk greater than that ofLb. casei, while this activity inLb. plantarumwas very low. Alanine aminopeptidase activity was almost non-existent for all strains tested, while lysine aminopeptidase activity appeared to be of fundamentally intracellular origin. Leucine aminopeptidase activity was also greater in cells that had been permeabilized than in whole cells forLb. caseiandLb. plantarum. Lc. lactissubsp.lactisleucine aminopeptidase activity was greater in whole cells. No significant hydrolysis of casein was found withLb. caseiI FPL 725 andLb. plantarumIFPL 722 permeabilized with Triton X-100 after 24 h incubation with whole bovine casein.


1970 ◽  
Vol 50 (2) ◽  
pp. 233-241 ◽  
Author(s):  
F. J. SOWDEN

The amino acids set free by proteolytic enzymes were determined with an amino acid analyzer. Soil and enzyme blanks were subtracted. Pronase released 2 to 10% of the aspartic acid + asparagine, threonine, serine, glutamic acid + glutamine, glycine, lysine and histidine in some fractions of soil organic matter along with 15–35% of the alanine, valine, isoleucine, leucine, tyrosine, phenylalanine and arginine. There was no release of proline, ornithine or ammonia. When the pronase hydrolysate was treated with leucine amino-peptidase, 15% of the proline was released, the yield of glycine was raised from 2 to 14% and the amount of the acidic amino acids was also higher. Acid hydrolysis of the pronase hydrolysate also released more amino acid material but the blanks were much higher than with leucine aminopeptidase. The results suggested that more than half of the aspartic and glutamic acids found on acid hydrolysis were present in the soil organic matter fractions as asparagine and glutamine. The action of pronase on the organic matter of the intact soil was slight, even in the presence of a complexing agent. Papain released very little amino acid material from organic matter fractions, but leucine aminopeptidase or HCl hydrolysis of the papain hydrolysate released about 10% of the amino acid of the fraction, indicating that significant amounts of peptides were formed on papain treatment.


1954 ◽  
Vol 142 (907) ◽  
pp. 170-174 ◽  

We have undertaken the investigation of the nature of the intracellular peptidases and transpeptidases in the belief that the information will be pertinent to an understanding of the genetic behaviour and growth of an organism or, simply, the synthesis of protein. It cannot be argued that the peptidases and transpeptidases are responsible for all steps in protein synthesis; the participation of peptidases in the synthesis of peptides and proteins would require that energy be derived from coupled reactions. Nevertheless, it would seem obvious that the peptidases are concerned with the synthesis of protein; peptidase activity is greatest in rapidly growing tissue and may be correlated with the mitotic rate of various types of cells. In addition, it is easily demonstrated that the peptidases can, in the presence of a suitable linked source of energy, catalyze the formation of dipeptides. Energy mechanisms are required, but these energy mechanisms are probably coupled with exchange reactions of many different types and specificities; these specificities may well be furnished by the peptidases. Our studies have indicated that the peptidase activities of a cell are a property of the polynucleotides of the cell (Binkley 1952). In our studies of the hydrolysis of glutathione (Olson & Binkley 1950) it became necessary to study the hydrolysis of the cysteinylglycine. Our most highly purified preparations of the enzyme have been found to be non-specific in nature and to hydrolyze all dipeptides not having an amino-acid of the D-configuration as the initial amino-acid. Leucylglycine, a substrate for the so-called leucine aminopeptidase activity of cells, is easily prepared and is an excellent substrate for studies of the non-specific dipeptidase; this substrate has been used in all our more recent work.


2021 ◽  
Vol 26 (1) ◽  
pp. 2269-2274
Author(s):  
IOAN PĂCEŞILĂ ◽  
EMILIA RADU

Phosphorus is one of the most important inorganic nutrients in aquatic ecosystems, the development and functioning of the phytoplankton communities being often correlated with the degree of availability in assimilable forms of this element. Alkaline phosphatase (AP) is an extracellular enzyme with nonspecific activity that catalyses the hydrolysis of a large variety of organic phosphate esters and release orthophosphates. During 2011-2013, AP Activity (APA) was assessed in the water column and sediments of several aquatic ecosystems from Danube Delta: Roșu Lake, Mândra Lake and their adjacent channels – Roșu-Împuțita and Roșu-Puiu. The intensity of APA widely fluctuated, ranging between 230-2578 nmol p-nitrophenol L-1h-1 in the water column and 2104-15631 nmol p-nitrophenol g-1h-1 in sediment. Along the entire period of the study, APA was the most intense in Roșu-Împuțita channel, for both water and sediment samples. Temporal dynamics revealed its highest values in summer for the water column and in autumn for sediment. Statistical analysis showed significant seasonal diferences of the APA dynamics in spring vs. summer and autumn for the water column, and any relevant diferences for sediment.


Nature ◽  
1959 ◽  
Vol 183 (4653) ◽  
pp. 51-52 ◽  
Author(s):  
O. BRAUN-FALCO ◽  
K. SALFELD

2000 ◽  
Vol 66 (1) ◽  
pp. 252-256 ◽  
Author(s):  
Katsuichi Saito ◽  
Kazuya Kondo ◽  
Ichiro Kojima ◽  
Atsushi Yokota ◽  
Fusao Tomita

ABSTRACT Streptomyces exfoliatus F3-2 produced an extracellular enzyme that converted levan, a β-2,6-linked fructan, into levanbiose. The enzyme was purified 50-fold from culture supernatant to give a single band on sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE). The molecular weights of this enzyme were 54,000 by SDS-PAGE and 60,000 by gel filtration, suggesting the monomeric structure of the enzyme. The isoelectric point of the enzyme was determined to be 4.7. The optimal pH and temperature of the enzyme for levan degradation were pH 5.5 and 60°C, respectively. The enzyme was stable in the pH range 3.5 to 8.0 and also up to 50°C. The enzyme gave levanbiose as a major degradation product from levan in an exo-acting manner. It was also found that this enzyme catalyzed hydrolysis of such fructooligosaccharides as 1-kestose, nystose, and 1-fructosylnystose by liberating fructose. Thus, this enzyme appeared to hydrolyze not only β-2,6-linkage of levan, but also β-2,1-linkage of fructooligosaccharides. From these data, the enzyme from S. exfoliatus F3-2 was identified as a novel 2,6-β-d-fructan 6-levanbiohydrolase (EC 3.2.1.64 ).


1992 ◽  
Vol 96 (2-3) ◽  
pp. 207-211 ◽  
Author(s):  
Steven J. Beard ◽  
Diana T. Ciccognani ◽  
Martin N. Hughes ◽  
Robert K. Poole
Keyword(s):  

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