scholarly journals Draft Genome Sequence of Multidrug-Resistant Strain Citrobacter portucalensis MBTC-1222, Isolated from Uziza ( Piper guineense ) Leaves in Nigeria

2018 ◽  
Vol 6 (9) ◽  
Author(s):  
Etinosa O. Igbinosa ◽  
Jana Rathje ◽  
Diana Habermann ◽  
Erik Brinks ◽  
Gyu-Sung Cho ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Noncoding Rnas ◽  
Multidrug Resistant ◽  
Whole Genome Sequence ◽  
Piper Guineense ◽  
Protein Coding ◽  
Antibiotic Resistant ◽  
Content Type ◽  
Multidrug Resistant Strain

ABSTRACT In this work, we report the draft whole-genome sequence of the multiply antibiotic-resistant Citrobacter portucalensis strain MBTC-1222 isolated from the uziza leafy vegetable in Nigeria. Sequence analysis showed the assembled genome size to be 4,881,935 bp, containing 4,603 protein-coding genes, 131 pseudogenes, 7 rRNAs, 74 tRNAs, and 9 noncoding RNAs (ncRNAs).

scholarly journals Draft Genome Sequence of a Highly ResistantStreptococcus pneumoniaeSerotype 15A Strain Isolated from Blood

2018 ◽  
Vol 6 (16) ◽  
pp. e00167-18 ◽  
Author(s):  
Revathy Arushothy ◽  
Norazah Ahmad ◽  
Fairuz Amran ◽  
Rohaidah Hashim ◽  
Nazirah Samsuddin ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Multidrug Resistant ◽  
Sequence Type ◽  
Draft Genome Sequence ◽  
Antibiotic Resistant ◽  
Content Type ◽  
Resistance To Penicillin ◽  
Resistant Strains ◽  
Multidrug Resistant Strain

ABSTRACTAfter the introduction of the pneumococcal conjugate vaccine in Malaysia in recent years, the emergence of nonvaccine serotypes is of concern, particularly the antibiotic-resistant strains, with an increase specifically in serotype 15A. Here, we report the draft genome sequence ofStreptococcus pneumoniaestrain SS40_16, isolated from the blood sample of a 19-month-old female in 2016. SS40_16 is a multidrug-resistant strain with resistance to penicillin (MIC, ≥2 µg/ml), tetracycline, and trimethoprim-sulfamethoxazole. The strain belongs to serotype 15A and sequence type 1591 (ST1591).

scholarly journals Draft Genome Sequence of an Unusually Multidrug-Resistant Strain of Achromobacter xylosoxidans from a Blood Isolate

2020 ◽  
Vol 9 (22) ◽  
Author(s):  
Hosoon Choi ◽  
Chetan Jinadatha ◽  
Piyali Chatterjee ◽  
Yonhui Allton ◽  
Dhammika H. Navarathna
Keyword(s):  
Genome Sequence ◽  
Resistant Strain ◽  
Antibiotic Susceptibility ◽  
Draft Genome ◽  
Multidrug Resistant ◽  
Draft Genome Sequence ◽  
Achromobacter Xylosoxidans ◽  
Blood Isolate ◽  
Content Type ◽  
Multidrug Resistant Strain

ABSTRACT Achromobacter xylosoxidans strain DN2019 was isolated from blood of a septicemia patient. We describe the draft genome and antibiotic susceptibility of this strain.

scholarly journals Draft Genome Sequence of a Multidrug-Resistant Strain of Enterococcus faecalis, PM01, Isolated from the Nest of an American Bushtit, Psaltriparius minimus

2017 ◽  
Vol 5 (11) ◽  
Author(s):  
Saika Esani ◽  
John V. H. Constable ◽  
Tricia A. Van Laar
Keyword(s):  
Enterococcus Faecalis ◽  
Genome Sequence ◽  
Resistant Strain ◽  
Draft Genome ◽  
Multidrug Resistant ◽  
Pathogenic Microorganisms ◽  
Content Type ◽  
Terrestrial Species ◽  
Primary Users ◽  
Multidrug Resistant Strain

ABSTRACT Pathogenic microorganisms associated with avian nests may detrimentally impact parental health and nest success for the nest primary users, potentially neighboring avian or terrestrial species, including humans. Here, we report the genome sequence of Enterococcus faecalis strain PM01, isolated from a failed nest of American bushtits, Psaltriparius minimus.

scholarly journals Draft Genome Sequence of Invasive Salmonella enterica Serovar Cannstatt Harboring mcr-1.1, Isolated from a Fatal Sepsis Case

2021 ◽  
Vol 10 (8) ◽  
Author(s):  
Wantana Paveenkittiporn ◽  
Watcharaporn Kamjumphol ◽  
Anusak Kerdsin
Keyword(s):  
Genome Sequence ◽  
Salmonella Enterica ◽  
Draft Genome ◽  
Genomic Analysis ◽  
Multidrug Resistant ◽  
Sequence Type ◽  
Whole Genome Sequence ◽  
Content Type ◽  
Fatal Sepsis ◽  
M 14

ABSTRACT Here, we report the whole-genome sequence of multidrug-resistant Salmonella enterica serovar Cannstatt harboring mcr-1.1, isolated from a fatal sepsis case. Genomic analysis revealed that the isolate was sequence type 2390 carrying mcr-1.1, blaCTX-M-14, aac(3)IId, aac(6′)Iaa, floR, qnrS1, sul2, tetA, and tetM. Three Inc plasmids were observed, including the IncX4 plasmid containing mcr-1.1.

scholarly journals Draft Genome Sequence of Bacillus pacificus KVCMST-8A-12, Isolated from a Marine Sediment Sample from the Kanyakumari Coast, India

2021 ◽  
Vol 10 (50) ◽  
Author(s):  
Asha Santhi ◽  
Venkatesh Subramanian ◽  
Krishnaveni Muthan
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Whole Genome Sequence ◽  
Rrna Genes ◽  
Trna Genes ◽  
Protein Coding ◽  
Content Type ◽  
Marine Sediment Sample

A DNase-producing Bacillus pacificus strain was isolated, and the whole-genome sequence is reported in this paper. The draft genome sequence of Bacillus pacificus KVCMST-8A-12 constitutes 2.4 Gbp of raw reads, with a GC content of 35.24%. In total, 5,661 protein-coding genes, 64 tRNA genes, and 4 rRNA genes were predicted.

scholarly journals Complete Genome Sequence of Lactobacillus plantarum Strain JDARSH, Isolated from Sheep Milk

2020 ◽  
Vol 9 (2) ◽  
Author(s):  
Abhinandan Patil ◽  
Anamika Dubey ◽  
Muneer Ahmad Malla ◽  
John Disouza ◽  
Shivaji Pawar ◽  
...  
Keyword(s):  
Lactobacillus Plantarum ◽  
Genome Sequence ◽  
Draft Genome ◽  
Whole Genome Sequence ◽  
Protein Coding ◽  
Coding Sequences ◽  
Content Type ◽  
Sheep Milk ◽  
Wide Range ◽  
Range Of Functions

Lactobacillus plantarum strain JDARSH, a potential probiotic with a wide range of functions, was isolated from sheep milk. Here, we report the whole-genome sequence of this bacterium. The draft genome yielded a 3.20-Mb genome and 2,980 protein-coding sequences.

scholarly journals Draft Genome Sequence of Lactobacillus fermentum BFE 6620, a Potential Starter Culture for African Vegetable Foods, Isolated from Fermented Cassava

2017 ◽  
Vol 5 (33) ◽  
Author(s):  
Eliud N. Wafula ◽  
Erik Brinks ◽  
Biserka Becker ◽  
Melanie Huch ◽  
Bernhard Trierweiler ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Starter Culture ◽  
Noncoding Rnas ◽  
Lactobacillus Fermentum ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
Vegetable Foods

ABSTRACT We report the draft genome sequence of Lactobacillus fermentum BFE 6620 from fermented cassava used as a potential starter culture for African vegetable fermentation. Sequence analysis showed the assembled genome size to be 1,982,893 bp, encoding a predicted total of 2,003 protein-coding genes, 14 rRNAs, 54 tRNAs, and 3 noncoding RNAs (ncRNAs).

scholarly journals Whole-Genome Sequence of Multidrug-Resistant Bibersteinia trehalosi Strain OADDL-BT1

2019 ◽  
Vol 8 (6) ◽  
Author(s):  
Sai Narayanan ◽  
Haley Bates ◽  
Anthony Confer ◽  
Brian Couger ◽  
Akhilesh Ramachandran
Keyword(s):  
Resistant Strain ◽  
Draft Genome ◽  
Multidrug Resistant ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Genome Sequences ◽  
Content Type ◽  
Bibersteinia Trehalosi ◽  
Chronic Pneumonia ◽  
Multidrug Resistant Strain

The genome of a multidrug-resistant strain of Bibersteinia trehalosi isolated from a calf with chronic pneumonia is presented. The draft genome sequences have been deposited at DDBJ/ENA/GenBank.

scholarly journals Whole-Genome Sequence of Acinetobacter baumannii Strain NUBRI-A, Isolated from a Hospitalized Patient in Khartoum, Sudan

2019 ◽  
Vol 8 (32) ◽  
Author(s):  
Sofia B. Mohamed ◽  
Mohamed Hassan ◽  
Abdalla Munir ◽  
Sumaya Kambal ◽  
Nusiba I. Abdalla ◽  
...  
Keyword(s):  
Acinetobacter Baumannii ◽  
Genome Sequence ◽  
Genomic Sequence ◽  
Draft Genome ◽  
Multidrug Resistant ◽  
Sequence Type ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Hospital Patient ◽  
Content Type

Acinetobacter baumannii has emerged as an important pathogen leading to multiple nosocomial outbreaks. Here, we describe the genomic sequence of a multidrug-resistant Acinetobacter baumannii sequence type 164 (ST164) isolate from a hospital patient in Sudan. To our knowledge, this is the first reported draft genome of an A. baumannii strain isolated from Sudan.

scholarly journals Draft Genome Sequence of the Multidrug-Resistant Strain Pseudomonas aeruginosa PA291, Isolated from Cystic Fibrosis Sputum

2021 ◽  
Vol 10 (36) ◽  
Author(s):  
Tiffany Luong ◽  
Ashley Schumann ◽  
Douglas Conrad ◽  
Dwayne Roach
Keyword(s):  
Cystic Fibrosis ◽  
Pseudomonas Aeruginosa ◽  
Genome Sequence ◽  
Resistant Strain ◽  
De Novo ◽  
Draft Genome ◽  
Multidrug Resistant ◽  
Content Type ◽  
Cystic Fibrosis Sputum ◽  
Multidrug Resistant Strain

Here, we report the genome sequence of PA291, a nonmucoid, multidrug-resistant strain of Pseudomonas aeruginosa isolated from cystic fibrosis sputum. Short reads were de novo assembled into 190 contigs and scaffold assembled to a length of 6.26 Mbp. PhiSpy predicts that PA291 is free of prophages.

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