scholarly journals Draft Genome Sequence of Labrenzia sp. Strain EL143, a Coral-Associated Alphaproteobacterium with Versatile Symbiotic Living Capability and Strong Halogen Degradation Potential

2018 ◽  
Vol 6 (10) ◽  
Author(s):  
Gisele Nunes Rodrigues ◽  
Asunción Lago-Lestón ◽  
Rodrigo Costa ◽  
Tina Keller-Costa
Keyword(s):  
Heavy Metals ◽  
Aromatic Compound ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Gorgonian Coral ◽  
Toxic Compounds ◽  
Content Type ◽  
Multiple Genes ◽  
Aromatic Compound Degradation

ABSTRACT We report here the genome sequence of Labrenzia sp. EL143, an alphaproteobacterium isolated from the gorgonian coral Eunicella labiata that possesses various genes involved in halogen and aromatic compound degradation, as well as polyketide synthesis. The strain also maintains multiple genes that confer resistance to toxic compounds such as heavy metals and antibiotics.

scholarly journals Draft Genome Sequence ofSphingorhabdussp. Strain EL138, a Metabolically Versatile Alphaproteobacterium Isolated from the Gorgonian CoralEunicella labiata

2018 ◽  
Vol 6 (9) ◽  
Author(s):  
Sandra Godinho Silva ◽  
Asunción Lago-Lestón ◽  
Rodrigo Costa ◽  
Tina Keller-Costa
Keyword(s):  
Heavy Metals ◽  
Genome Sequence ◽  
Aromatic Compounds ◽  
Draft Genome ◽  
Polycyclic Aromatic Compounds ◽  
Draft Genome Sequence ◽  
Gorgonian Coral ◽  
Content Type ◽  
Polycyclic Aromatic

ABSTRACTHere, we report the draft genome sequence ofSphingorhabdussp. strain EL138, an alphaproteobacterium that shows potential to degrade polycyclic aromatic compounds and to cope with various heavy metals and antibiotics. Moreover, the strain, isolated from the gorgonian coralEunicella labiata, possesses several genes involved in the biosynthesis of polyphosphates, polyketides, and terpenoids.

scholarly journals Draft Genome Sequence of Comamonas testosteroni R2, Consisting of Aromatic Compound Degradation Genes for Phenol Hydroxylase

2017 ◽  
Vol 5 (36) ◽  
Author(s):  
Fatma Azwani ◽  
Kenshi Suzuki ◽  
Masahiro Honjyo ◽  
Yosuke Tashiro ◽  
Hiroyuki Futamata
Keyword(s):  
Continuous Culture ◽  
Gene Cluster ◽  
Aromatic Compound ◽  
Genome Sequence ◽  
Phenol Degradation ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Comamonas Testosteroni ◽  
Content Type ◽  
Aromatic Compound Degradation

ABSTRACT Comamonas testosteroni strain R2 was isolated from a continuous culture enriched by a low concentration of phenol-oxygenating activities with low K s values (below 1 μM). The draft genome sequence of C. testosteroni strain R2 reported here may contribute to determining the phenol degradation gene cluster.

scholarly journals Draft Genome Sequence of High-Melanin-Yielding Aeromonas media Strain WS

2012 ◽  
Vol 194 (23) ◽  
pp. 6693-6694 ◽  
Author(s):  
Baozhong Chai ◽  
He Wang ◽  
Xiangdong Chen
Keyword(s):  
Candidate Genes ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Separate Study ◽  
Content Type ◽  
Melanin Formation ◽  
Multiple Genes

ABSTRACTWe sequenced the genome of the high-melanin-yieldingAeromonas mediastrain WS and then analyzed genes potentially involved in melanin formation. The 4.2-Mb draft genome carries multiple genes responsible for pyomelanin synthesis and other candidate genes identified in our separate study, which have no homolog in other strains ofAeromonasspecies.

scholarly journals Draft Genome Sequence of Enterococcus faecalis UMB1309, Isolated from Catheterized Urine

2020 ◽  
Vol 9 (22) ◽  
Author(s):  
Adam Schwartz ◽  
Taylor Miller-Ensminger ◽  
Adelina Voukadinova ◽  
Alan J. Wolfe ◽  
Catherine Putonti
Keyword(s):  
Antibiotic Resistance ◽  
Enterococcus Faecalis ◽  
Virulence Factors ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Multiple Genes

ABSTRACT A strain of Enterococcus faecalis was isolated from catheterized urine. Here, we present the draft genome sequence of this isolate, E. faecalis UMB1309. Analysis of the genome revealed multiple genes coding for virulence factors, as well as genes associated with antibiotic resistance.

scholarly journals Draft Genome Sequence of Shewanella algidipiscicola H1, a Highly Chromate-Resistant Strain Isolated from Mediterranean Marine Sediments

2018 ◽  
Vol 7 (8) ◽  
Author(s):  
Hiba Baaziz ◽  
Olivier N. Lemaire ◽  
Cécile Jourlin-Castelli ◽  
Chantal Iobbi-Nivol ◽  
Vincent Méjean ◽  
...  
Keyword(s):  
Heavy Metals ◽  
Genome Sequence ◽  
Marine Sediments ◽  
Resistant Strain ◽  
Draft Genome ◽  
Electron Acceptors ◽  
Draft Genome Sequence ◽  
Toxic Substances ◽  
Content Type

The ability of different Shewanella spp. to convert heavy metals and toxic substances into less toxic products by using them as electron acceptors has led to their use in environmental clean-up strategies.

scholarly journals Draft Genome Sequence of a Dissimilatory U(VI)-Reducing Bacterium, Shewanella xiamenensis Strain DCB2-1, Isolated from Nitrate- and Radionuclide-Contaminated Groundwater in Russia

2018 ◽  
Vol 6 (25) ◽  
Author(s):  
Denis S. Grouzdev ◽  
Alexey V. Safonov ◽  
Tamara L. Babich ◽  
Tatiyana P. Tourova ◽  
Maria S. Krutkina ◽  
...  
Keyword(s):  
Heavy Metals ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Contaminated Groundwater ◽  
Metals And Metalloids ◽  
Content Type ◽  
Gene Sets

ABSTRACT Here, we describe the draft genome sequence of Shewanella xiamenensis strain DCB2-1, isolated from nitrate- and radionuclide-contaminated groundwater. This strain is able to reduce nitrate, Tc(VII), Cr(VI), Fe(III), and U(VI), and its genome sequence contains several gene sets encoding denitrification, resistance to heavy metals, and reduction of metals and metalloids.

scholarly journals Draft Genome Sequence of Mercury-Resistant Pseudomonas putida Strain DRA525

2018 ◽  
Vol 6 (18) ◽  
pp. e00370-18 ◽  
Author(s):  
Kevin Drace ◽  
Stephanie Giangiuli ◽  
Claire LeSar ◽  
Adam M. Kiefer
Keyword(s):  
Heavy Metals ◽  
Pseudomonas Putida ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Multidrug Efflux ◽  
Content Type ◽  
Multidrug Efflux Pumps ◽  
Gene Sets ◽  
Multiple Antibiotics

ABSTRACT We report here the draft genome sequence of Pseudomonas putida strain DRA525, isolated from mercury-contaminated soil. This strain shows resistance to mercury and multiple antibiotics, and its genome sequence contains several gene sets known to confer resistance to heavy metals enzymatically and through multidrug efflux pumps.

scholarly journals Draft Genome Sequence of Roseomonas aestuarii Strain JR1/69-1-13 Isolated from Nitrate- and Radionuclide-Contaminated Groundwater in Russia

2018 ◽  
Vol 6 (25) ◽  
Author(s):  
Denis S. Grouzdev ◽  
Tamara L. Babich ◽  
Tatiyana P. Tourova ◽  
Diyana S. Sokolova ◽  
Ruslan R. Abdullin ◽  
...  
Keyword(s):  
Heavy Metals ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Contaminated Groundwater ◽  
Metals And Metalloids ◽  
Content Type ◽  
Heavy Metals And Metalloids ◽  
Genomic Basis

ABSTRACT The draft genome sequence of Roseomonas aestuarii strain JR1/69-1-13, an aerobic chemoorganotrophic bacterium isolated from nitrate- and radionuclide-contaminated groundwater in Russia, is presented here. The genome was annotated to elucidate the genomic basis for the strain’s adaptation to the environment and its resistance to nitrate, heavy metals, and metalloids.

scholarly journals Draft Genome Sequence of Stenotrophomonas bentonitica BII-R7T, a Selenite-Reducing Bacterium Isolated from Spanish Bentonites

2017 ◽  
Vol 5 (31) ◽  
Author(s):  
Iván Sánchez-Castro ◽  
Mohammed Bakkali ◽  
Mohamed L. Merroun
Keyword(s):  
Heavy Metals ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
High Tolerance ◽  
Negative Bacterium ◽  
Protein Coding ◽  
Coding Sequences ◽  
Gram Negative ◽  
Content Type

ABSTRACT The Gram-negative bacterium Stenotrophomonas bentonitica BII-R7T was isolated from bentonite formations. Like other species within the genus Stenotrophomonas, strain BII-R7T possesses high tolerance to numerous heavy metals, suggesting potential for bioremediation purposes. The draft genome sequence reported here comprises 4.37 Mb with a G+C content of 66.5% and 3,796 predicted protein-coding sequences.

scholarly journals Draft Genome Sequence of Urease-Producing Pseudorhodobacter sp. Strain E13, Isolated from the Yellow Sea in Gunsan, South Korea

2019 ◽  
Vol 8 (23) ◽  
Author(s):  
Si Chul Kim ◽  
Hyo Jung Lee
Keyword(s):  
South Korea ◽  
Genome Sequence ◽  
Yellow Sea ◽  
Draft Genome ◽  
The Yellow Sea ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Coding Sequences ◽  
Gram Negative ◽  
Content Type

Here, we report the draft genome sequence of Pseudorhodobacter sp. strain E13, a Gram-negative, aerobic, nonflagellated, and rod-shaped bacterium which was isolated from the Yellow Sea in South Korea. The assembled genome sequence is 3,878,578 bp long with 3,646 protein-coding sequences in 159 contigs.

Sign in / Sign up

Export Citation Format

Share Document