scholarly journals Draft Genome Sequence of a Dissimilatory U(VI)-Reducing Bacterium, Shewanella xiamenensis Strain DCB2-1, Isolated from Nitrate- and Radionuclide-Contaminated Groundwater in Russia

2018 ◽  
Vol 6 (25) ◽  
Author(s):  
Denis S. Grouzdev ◽  
Alexey V. Safonov ◽  
Tamara L. Babich ◽  
Tatiyana P. Tourova ◽  
Maria S. Krutkina ◽  
...  
Keyword(s):  
Heavy Metals ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Contaminated Groundwater ◽  
Metals And Metalloids ◽  
Content Type ◽  
Gene Sets

ABSTRACT Here, we describe the draft genome sequence of Shewanella xiamenensis strain DCB2-1, isolated from nitrate- and radionuclide-contaminated groundwater. This strain is able to reduce nitrate, Tc(VII), Cr(VI), Fe(III), and U(VI), and its genome sequence contains several gene sets encoding denitrification, resistance to heavy metals, and reduction of metals and metalloids.

scholarly journals Draft Genome Sequence of Roseomonas aestuarii Strain JR1/69-1-13 Isolated from Nitrate- and Radionuclide-Contaminated Groundwater in Russia

2018 ◽  
Vol 6 (25) ◽  
Author(s):  
Denis S. Grouzdev ◽  
Tamara L. Babich ◽  
Tatiyana P. Tourova ◽  
Diyana S. Sokolova ◽  
Ruslan R. Abdullin ◽  
...  
Keyword(s):  
Heavy Metals ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Contaminated Groundwater ◽  
Metals And Metalloids ◽  
Content Type ◽  
Heavy Metals And Metalloids ◽  
Genomic Basis

ABSTRACT The draft genome sequence of Roseomonas aestuarii strain JR1/69-1-13, an aerobic chemoorganotrophic bacterium isolated from nitrate- and radionuclide-contaminated groundwater in Russia, is presented here. The genome was annotated to elucidate the genomic basis for the strain’s adaptation to the environment and its resistance to nitrate, heavy metals, and metalloids.

scholarly journals Draft Genome Sequence of Mercury-Resistant Pseudomonas putida Strain DRA525

2018 ◽  
Vol 6 (18) ◽  
pp. e00370-18 ◽  
Author(s):  
Kevin Drace ◽  
Stephanie Giangiuli ◽  
Claire LeSar ◽  
Adam M. Kiefer
Keyword(s):  
Heavy Metals ◽  
Pseudomonas Putida ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Multidrug Efflux ◽  
Content Type ◽  
Multidrug Efflux Pumps ◽  
Gene Sets ◽  
Multiple Antibiotics

ABSTRACT We report here the draft genome sequence of Pseudomonas putida strain DRA525, isolated from mercury-contaminated soil. This strain shows resistance to mercury and multiple antibiotics, and its genome sequence contains several gene sets known to confer resistance to heavy metals enzymatically and through multidrug efflux pumps.

scholarly journals Draft Genome Sequence of Labrenzia sp. Strain EL143, a Coral-Associated Alphaproteobacterium with Versatile Symbiotic Living Capability and Strong Halogen Degradation Potential

2018 ◽  
Vol 6 (10) ◽  
Author(s):  
Gisele Nunes Rodrigues ◽  
Asunción Lago-Lestón ◽  
Rodrigo Costa ◽  
Tina Keller-Costa
Keyword(s):  
Heavy Metals ◽  
Aromatic Compound ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Gorgonian Coral ◽  
Toxic Compounds ◽  
Content Type ◽  
Multiple Genes ◽  
Aromatic Compound Degradation

ABSTRACT We report here the genome sequence of Labrenzia sp. EL143, an alphaproteobacterium isolated from the gorgonian coral Eunicella labiata that possesses various genes involved in halogen and aromatic compound degradation, as well as polyketide synthesis. The strain also maintains multiple genes that confer resistance to toxic compounds such as heavy metals and antibiotics.

scholarly journals Draft Genome Sequence ofSphingorhabdussp. Strain EL138, a Metabolically Versatile Alphaproteobacterium Isolated from the Gorgonian CoralEunicella labiata

2018 ◽  
Vol 6 (9) ◽  
Author(s):  
Sandra Godinho Silva ◽  
Asunción Lago-Lestón ◽  
Rodrigo Costa ◽  
Tina Keller-Costa
Keyword(s):  
Heavy Metals ◽  
Genome Sequence ◽  
Aromatic Compounds ◽  
Draft Genome ◽  
Polycyclic Aromatic Compounds ◽  
Draft Genome Sequence ◽  
Gorgonian Coral ◽  
Content Type ◽  
Polycyclic Aromatic

ABSTRACTHere, we report the draft genome sequence ofSphingorhabdussp. strain EL138, an alphaproteobacterium that shows potential to degrade polycyclic aromatic compounds and to cope with various heavy metals and antibiotics. Moreover, the strain, isolated from the gorgonian coralEunicella labiata, possesses several genes involved in the biosynthesis of polyphosphates, polyketides, and terpenoids.

scholarly journals Draft Genome Sequence of Shewanella algidipiscicola H1, a Highly Chromate-Resistant Strain Isolated from Mediterranean Marine Sediments

2018 ◽  
Vol 7 (8) ◽  
Author(s):  
Hiba Baaziz ◽  
Olivier N. Lemaire ◽  
Cécile Jourlin-Castelli ◽  
Chantal Iobbi-Nivol ◽  
Vincent Méjean ◽  
...  
Keyword(s):  
Heavy Metals ◽  
Genome Sequence ◽  
Marine Sediments ◽  
Resistant Strain ◽  
Draft Genome ◽  
Electron Acceptors ◽  
Draft Genome Sequence ◽  
Toxic Substances ◽  
Content Type

The ability of different Shewanella spp. to convert heavy metals and toxic substances into less toxic products by using them as electron acceptors has led to their use in environmental clean-up strategies.

scholarly journals Draft Genome Sequence of Stenotrophomonas bentonitica BII-R7T, a Selenite-Reducing Bacterium Isolated from Spanish Bentonites

2017 ◽  
Vol 5 (31) ◽  
Author(s):  
Iván Sánchez-Castro ◽  
Mohammed Bakkali ◽  
Mohamed L. Merroun
Keyword(s):  
Heavy Metals ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
High Tolerance ◽  
Negative Bacterium ◽  
Protein Coding ◽  
Coding Sequences ◽  
Gram Negative ◽  
Content Type

ABSTRACT The Gram-negative bacterium Stenotrophomonas bentonitica BII-R7T was isolated from bentonite formations. Like other species within the genus Stenotrophomonas, strain BII-R7T possesses high tolerance to numerous heavy metals, suggesting potential for bioremediation purposes. The draft genome sequence reported here comprises 4.37 Mb with a G+C content of 66.5% and 3,796 predicted protein-coding sequences.

scholarly journals Draft Genome Sequence of Urease-Producing Pseudorhodobacter sp. Strain E13, Isolated from the Yellow Sea in Gunsan, South Korea

2019 ◽  
Vol 8 (23) ◽  
Author(s):  
Si Chul Kim ◽  
Hyo Jung Lee
Keyword(s):  
South Korea ◽  
Genome Sequence ◽  
Yellow Sea ◽  
Draft Genome ◽  
The Yellow Sea ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Coding Sequences ◽  
Gram Negative ◽  
Content Type

Here, we report the draft genome sequence of Pseudorhodobacter sp. strain E13, a Gram-negative, aerobic, nonflagellated, and rod-shaped bacterium which was isolated from the Yellow Sea in South Korea. The assembled genome sequence is 3,878,578 bp long with 3,646 protein-coding sequences in 159 contigs.

scholarly journals Draft Genome Sequence of a Vibrio harveyi Strain Associated with Vibriosis in Pacific White Shrimp (Litopenaeus vannamei)

2017 ◽  
Vol 5 (7) ◽  
Author(s):  
Emille Moreno ◽  
Marci Parks ◽  
Lee J. Pinnell ◽  
James J. Tallman ◽  
Jeffrey W. Turner
Keyword(s):  
Genome Sequence ◽  
Litopenaeus Vannamei ◽  
Vibrio Harveyi ◽  
Draft Genome ◽  
Penaeid Shrimp ◽  
Pacific White Shrimp ◽  
Draft Genome Sequence ◽  
White Shrimp ◽  
Content Type ◽  
Future Studies

ABSTRACT Vibrio harveyi is a Gram-negative bacterium associated with vibriosis in penaeid shrimp. Here, we report the draft genome sequence of a V. harveyi strain isolated from Pacific white shrimp (Litopenaeus vannamei) during a vibriosis outbreak. The availability of this genome will aid future studies of vibriosis in shrimp aquaculture.

scholarly journals Draft Genome Sequence of Pantoea sp. Strain A4, a Rafflesia-Associated Bacterium That ProducesN-Acylhomoserine Lactones as Quorum-Sensing Molecules

2012 ◽  
Vol 194 (23) ◽  
pp. 6610-6610 ◽  
Author(s):  
Kar-Wai Hong ◽  
Han Ming Gan ◽  
Siew-Moon Low ◽  
Patrick Kok Yuen Lee ◽  
Yee-Meng Chong ◽  
...  
Keyword(s):  
Quorum Sensing ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Negative Bacterium ◽  
Gram Negative ◽  
Content Type ◽  
First Time

ABSTRACTPantoeasp. strain A4 is a Gram-negative bacterium isolated from theRafflesiaflower. We present here, for the first time, the genome sequence ofRafflesia-associatedPantoeasp. strain A4, which exhibited quorum-sensing activity.

scholarly journals Draft Genome Sequence of the Iridescent Marine Bacterium Cellulophaga lytica CECT 8139

2017 ◽  
Vol 5 (36) ◽  
Author(s):  
Maylis Chapelais-Baron ◽  
Isabelle Goubet ◽  
Eric Duchaud ◽  
Eric Rosenfeld
Keyword(s):  
Genome Sequence ◽  
Marine Bacterium ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Physiological Properties

ABSTRACT Some species of the genus Cellulophaga have been reported as having biotechnological interests and noteworthy physiological properties. We report here the draft genome sequence of Cellulophaga lytica CECT 8139, a bacterium that produces an intensely iridescent colony biofilm on agar surfaces.

Sign in / Sign up

Export Citation Format

Share Document