scholarly journals Draft Genome Sequence of Comamonas testosteroni R2, Consisting of Aromatic Compound Degradation Genes for Phenol Hydroxylase

2017 ◽  
Vol 5 (36) ◽  
Author(s):  
Fatma Azwani ◽  
Kenshi Suzuki ◽  
Masahiro Honjyo ◽  
Yosuke Tashiro ◽  
Hiroyuki Futamata
Keyword(s):  
Continuous Culture ◽  
Gene Cluster ◽  
Aromatic Compound ◽  
Genome Sequence ◽  
Phenol Degradation ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Comamonas Testosteroni ◽  
Content Type ◽  
Aromatic Compound Degradation

ABSTRACT Comamonas testosteroni strain R2 was isolated from a continuous culture enriched by a low concentration of phenol-oxygenating activities with low K s values (below 1 μM). The draft genome sequence of C. testosteroni strain R2 reported here may contribute to determining the phenol degradation gene cluster.

scholarly journals Draft Genome Sequence of Comamonas testosteroni TA441, a Bacterium That Has a Cryptic Phenol Degradation Gene Cluster

2019 ◽  
Vol 8 (39) ◽  
Author(s):  
Hiroyuki Arai ◽  
Masaharu Ishii
Keyword(s):  
Gene Cluster ◽  
Genome Sequence ◽  
Phenol Degradation ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Comamonas Testosteroni ◽  
Spontaneous Mutations ◽  
Content Type ◽  
Repressor Gene ◽  
Mutant Strains

Comamonas testosteroni TA441 has a complete phenol degradation gene cluster but does not degrade phenol because the cluster is tightly repressed. However, mutant strains that can degrade phenol arise by spontaneous mutations of a repressor gene during incubation with phenol. Here, we report the draft genome sequence of strain TA441.

scholarly journals Draft Genome Sequence of Labrenzia sp. Strain EL143, a Coral-Associated Alphaproteobacterium with Versatile Symbiotic Living Capability and Strong Halogen Degradation Potential

2018 ◽  
Vol 6 (10) ◽  
Author(s):  
Gisele Nunes Rodrigues ◽  
Asunción Lago-Lestón ◽  
Rodrigo Costa ◽  
Tina Keller-Costa
Keyword(s):  
Heavy Metals ◽  
Aromatic Compound ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Gorgonian Coral ◽  
Toxic Compounds ◽  
Content Type ◽  
Multiple Genes ◽  
Aromatic Compound Degradation

ABSTRACT We report here the genome sequence of Labrenzia sp. EL143, an alphaproteobacterium isolated from the gorgonian coral Eunicella labiata that possesses various genes involved in halogen and aromatic compound degradation, as well as polyketide synthesis. The strain also maintains multiple genes that confer resistance to toxic compounds such as heavy metals and antibiotics.

scholarly journals Draft Genome Sequence of the Polychlorinated Biphenyl Degrader Comamonas testosteroni Strain YAZ2, Isolated from a Natural Landscape in the Tohoku Region of Japan

2022 ◽  
Author(s):  
Tomijiro Hara ◽  
Yumiko Takatsuka ◽  
Yuh Shiwa ◽  
Kenji Yokota
Keyword(s):  
Gene Cluster ◽  
Genome Sequence ◽  
Polychlorinated Biphenyl ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Comamonas Testosteroni ◽  
Natural Landscape ◽  
Content Type

We report a draft genome sequence of Comamonas testosteroni strain YAZ2, a polychlorinated biphenyl (PCB) degrader that was isolated from a PCB-unpolluted environment. The assembled genome contains a single 5.4-Mb chromosome and an 87-kb plasmid. The bph gene cluster, which is involved in PCB degradation, was found on the chromosome.

scholarly journals Draft Genome Sequence of Enterococcus canintestini 49, a Potential Probiotic That Produces Multiple Bacteriocins

2017 ◽  
Vol 5 (40) ◽  
Author(s):  
Jeella Z. Acedo ◽  
Cherry Ibarra Romero ◽  
Sarah T. Miyata ◽  
Alysson H. Blaine ◽  
Lynn M. McMullen ◽  
...  
Keyword(s):  
Listeria Monocytogenes ◽  
Gene Cluster ◽  
Virulence Factors ◽  
Clostridium Perfringens ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Vancomycin Resistant Enterococci ◽  
Vancomycin Resistant

ABSTRACT Enterococcus canintestini 49, isolated from dog feces, is active against Clostridium perfringens, vancomycin-resistant enterococci, and Listeria monocytogenes. Its draft genome sequence reported herein contains a gene cluster encoding multiple bacteriocins and indicates the absence of genes for virulence factors. These characteristics signify the strain’s potential for use as a probiotic.

scholarly journals Draft Genome Sequence of Phenol-Degrading Variovorax boronicumulans Strain HAB-30

2020 ◽  
Vol 9 (7) ◽  
Author(s):  
Fatma Azwani Abdul Aziz ◽  
Kenshi Suzuki ◽  
Ryota Moriuchi ◽  
Hideo Dohra ◽  
Yosuke Tashiro ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Aromatic Compounds ◽  
Metabolic Pathways ◽  
Chemostat Culture ◽  
Phenol Degradation ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Degradation Pathways ◽  
Content Type ◽  
Genes Encoding

We report the draft genome sequence of Variovorax boronicumulans strain HAB-30, which was isolated from a phenol-degrading chemostat culture. This strain contains genes encoding a multicomponent type of phenol hydroxylase, with degradation pathways for catechol and other aromatic compounds. The genome sequence will be useful for understanding the metabolic pathways involved in phenol degradation.

scholarly journals Draft Genome Sequence of Brevibacillus laterosporus OSY-I1, a Strain That Produces Brevibacillin, Which Combats Drug-Resistant Gram-Positive Bacteria

2017 ◽  
Vol 5 (41) ◽  
Author(s):  
Xu Yang ◽  
En Huang ◽  
Mustafa Yesil ◽  
Lingzi Xiaoli ◽  
Edward G. Dudley ◽  
...  
Keyword(s):  
Gene Cluster ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Drug Resistant ◽  
Gram Positive ◽  
Content Type ◽  
Gram Positive Bacteria ◽  
Brevibacillus Laterosporus ◽  
Antimicrobial Lipopeptide

ABSTRACT Brevibacillus laterosporus OSY-I1 is a Gram-positive spore-forming bacterium isolated from soil. The bacterium produces brevibacillin, an antimicrobial lipopeptide effective against several drug-resistant Gram-positive bacteria. Here, we present the draft genome sequence of the strain OSY-I1 and the gene cluster responsible for the biosynthesis of brevibacillin.

scholarly journals Draft Genome Sequence of Staphylococcus aureus 4185, a Strain That Produces Aureocyclicin 4185

2017 ◽  
Vol 5 (44) ◽  
Author(s):  
Márcia Silva Francisco ◽  
Felipe Miceli Farias ◽  
Ilana Nascimento Sousa Santos ◽  
Selda Loase Salustiano Marques-Bastos ◽  
Rodolpho Mattos Albano ◽  
...  
Keyword(s):  
Staphylococcus Aureus ◽  
Gene Cluster ◽  
Genome Sequence ◽  
Genome Analysis ◽  
Draft Genome ◽  
Complete Sequence ◽  
Bacterial Chromosome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Bacteriocin Gene

ABSTRACT The draft genome sequence of the aureocyclicin 4185-producing strain Staphylococcus aureus 4185 is presented. The assembly contains 2,789,721 bp and a G+C content of 32.8%. Genome analysis allowed us to determine the complete sequence of the bacteriocinogenic plasmid pRJ101 and to find another bacteriocin gene cluster encoded on the bacterial chromosome.

scholarly journals Draft Genome Sequence of Urease-Producing Pseudorhodobacter sp. Strain E13, Isolated from the Yellow Sea in Gunsan, South Korea

2019 ◽  
Vol 8 (23) ◽  
Author(s):  
Si Chul Kim ◽  
Hyo Jung Lee
Keyword(s):  
South Korea ◽  
Genome Sequence ◽  
Yellow Sea ◽  
Draft Genome ◽  
The Yellow Sea ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Coding Sequences ◽  
Gram Negative ◽  
Content Type

Here, we report the draft genome sequence of Pseudorhodobacter sp. strain E13, a Gram-negative, aerobic, nonflagellated, and rod-shaped bacterium which was isolated from the Yellow Sea in South Korea. The assembled genome sequence is 3,878,578 bp long with 3,646 protein-coding sequences in 159 contigs.

scholarly journals Draft Genome Sequence of a Vibrio harveyi Strain Associated with Vibriosis in Pacific White Shrimp (Litopenaeus vannamei)

2017 ◽  
Vol 5 (7) ◽  
Author(s):  
Emille Moreno ◽  
Marci Parks ◽  
Lee J. Pinnell ◽  
James J. Tallman ◽  
Jeffrey W. Turner
Keyword(s):  
Genome Sequence ◽  
Litopenaeus Vannamei ◽  
Vibrio Harveyi ◽  
Draft Genome ◽  
Penaeid Shrimp ◽  
Pacific White Shrimp ◽  
Draft Genome Sequence ◽  
White Shrimp ◽  
Content Type ◽  
Future Studies

ABSTRACT Vibrio harveyi is a Gram-negative bacterium associated with vibriosis in penaeid shrimp. Here, we report the draft genome sequence of a V. harveyi strain isolated from Pacific white shrimp (Litopenaeus vannamei) during a vibriosis outbreak. The availability of this genome will aid future studies of vibriosis in shrimp aquaculture.

scholarly journals Draft Genome Sequence of Pantoea sp. Strain A4, a Rafflesia-Associated Bacterium That ProducesN-Acylhomoserine Lactones as Quorum-Sensing Molecules

2012 ◽  
Vol 194 (23) ◽  
pp. 6610-6610 ◽  
Author(s):  
Kar-Wai Hong ◽  
Han Ming Gan ◽  
Siew-Moon Low ◽  
Patrick Kok Yuen Lee ◽  
Yee-Meng Chong ◽  
...  
Keyword(s):  
Quorum Sensing ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Negative Bacterium ◽  
Gram Negative ◽  
Content Type ◽  
First Time

ABSTRACTPantoeasp. strain A4 is a Gram-negative bacterium isolated from theRafflesiaflower. We present here, for the first time, the genome sequence ofRafflesia-associatedPantoeasp. strain A4, which exhibited quorum-sensing activity.

Sign in / Sign up

Export Citation Format

Share Document